RNA–Protein interactions for RNA: ENST00000568153.1

CAPN3-218, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-218ENST00000568153 A6NN06 94 aa2.75□□□□□ -1.97
CAPN3-218ENST00000568153 SPINT4Q6UDR6 99 aa2.75□□□□□ -1.97
CAPN3-218ENST00000568153 MT2AP02795 61 aa2.74□□□□□ -1.97
CAPN3-218ENST00000568153 KRTAP12-1P59990 96 aa2.73□□□□□ -1.97
CAPN3-218ENST00000568153 MT1FP04733 61 aa2.72□□□□□ -1.97
CAPN3-218ENST00000568153 SPRR2GQ9BYE4 73 aa2.71□□□□□ -1.98
CAPN3-218ENST00000568153 PLAC4Q8WY50 150 aa2.68□□□□□ -1.98
CAPN3-218ENST00000568153 ROMO1P60602 79 aa2.67□□□□□ -1.98
CAPN3-218ENST00000568153 CAMK2N1Q7Z7J9 78 aa2.66□□□□□ -1.98
CAPN3-218ENST00000568153 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
CAPN3-218ENST00000568153 KRTAP5-5Q701N2 237 aaPredicted RBP2.65□□□□□ -1.99
CAPN3-218ENST00000568153 KRTAP19-8Q3LI54 63 aa2.64□□□□□ -1.99
CAPN3-218ENST00000568153 SSPOA2VEC9 5147 aa2.63□□□□□ -1.99
CAPN3-218ENST00000568153 SYNE2Q8WXH0 6885 aaKnown RBP2.61□□□□□ -1.99
CAPN3-218ENST00000568153 C10orf95Q9H7T3 257 aa2.59□□□□□ -1.99
CAPN3-218ENST00000568153 MT1BP07438 61 aa2.58□□□□□ -2
CAPN3-218ENST00000568153 KRTAP25-1Q3LHN0 102 aa2.55□□□□□ -2
CAPN3-218ENST00000568153 MACF1Q9UPN3 7388 aaKnown RBP2.54□□□□□ -2
CAPN3-218ENST00000568153 TNP1P09430 55 aa2.54□□□□□ -2
CAPN3-218ENST00000568153 KRTAP5-2Q701N4 177 aa2.53□□□□□ -2
CAPN3-218ENST00000568153 LCE3DQ9BYE3 92 aa2.53□□□□□ -2
CAPN3-218ENST00000568153 NEBP20929 6669 aa2.53□□□□□ -2
CAPN3-218ENST00000568153 PRO2289Q9P1D8 64 aa2.52□□□□□ -2.01
CAPN3-218ENST00000568153 USH2AO75445 5202 aa2.52□□□□□ -2.01
CAPN3-218ENST00000568153 MT1XP80297 61 aa2.5□□□□□ -2.01
CAPN3-218ENST00000568153 PP632Q6XCG6 107 aa2.48□□□□□ -2.01
CAPN3-218ENST00000568153 FCGBPQ9Y6R7 5405 aaPredicted RBP2.48□□□□□ -2.01
CAPN3-218ENST00000568153 LCE1CQ5T751 118 aa2.47□□□□□ -2.01
CAPN3-218ENST00000568153 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CAPN3-218ENST00000568153 KRTAP19-6Q3LI70 58 aa2.41□□□□□ -2.02
CAPN3-218ENST00000568153 GPR98Q8WXG9 6306 aa2.39□□□□□ -2.03
CAPN3-218ENST00000568153 KRTAP20-1Q3LI63 56 aa2.39□□□□□ -2.03
CAPN3-218ENST00000568153 SPRR5A0A1B0GTR4 108 aa2.38□□□□□ -2.03
CAPN3-218ENST00000568153 KRTAP6-3Q3LI67 103 aa2.36□□□□□ -2.03
CAPN3-218ENST00000568153 MUC12Q9UKN1 5478 aa2.35□□□□□ -2.03
CAPN3-218ENST00000568153 KRTAP8-1Q8IUC2 63 aa2.35□□□□□ -2.03
CAPN3-218ENST00000568153 KRTAP12-3P60328 96 aa2.31□□□□□ -2.04
CAPN3-218ENST00000568153 KRTAP19-5Q3LI72 72 aa2.29□□□□□ -2.04
CAPN3-218ENST00000568153 KMT2DO14686 5537 aa2.27□□□□□ -2.05
CAPN3-218ENST00000568153 MDN1Q9NU22 5596 aa2.25□□□□□ -2.05
CAPN3-218ENST00000568153 KRTAP19-7Q3SYF9 63 aa2.23□□□□□ -2.05
CAPN3-218ENST00000568153 KRTAP2-3P0C7H8 128 aa2.22□□□□□ -2.05
CAPN3-218ENST00000568153 KRTAP2-4Q9BYR9 128 aa2.22□□□□□ -2.05
CAPN3-218ENST00000568153 MT1EP04732 61 aa2.2□□□□□ -2.06
CAPN3-218ENST00000568153 LUZP6Q538Z0 58 aa2.16□□□□□ -2.06
CAPN3-218ENST00000568153 MT1LQ93083 61 aa2.16□□□□□ -2.06
CAPN3-218ENST00000568153 SPRR2FQ96RM1 72 aa2.15□□□□□ -2.07
CAPN3-218ENST00000568153 MT1GP13640 62 aa2.13□□□□□ -2.07
CAPN3-218ENST00000568153 KRTAP2-1Q9BYU5 128 aa2.12□□□□□ -2.07
CAPN3-218ENST00000568153 KRTAP19-3Q7Z4W3 81 aa2.11□□□□□ -2.07
CAPN3-218ENST00000568153 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
CAPN3-218ENST00000568153 MT1MQ8N339 61 aa2.06□□□□□ -2.08
CAPN3-218ENST00000568153 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
CAPN3-218ENST00000568153 SPRR2EP22531 72 aa2.04□□□□□ -2.08
CAPN3-218ENST00000568153 SPRR2BP35325 72 aa2.04□□□□□ -2.08
CAPN3-218ENST00000568153 SPRR2AP35326 72 aa2.04□□□□□ -2.08
CAPN3-218ENST00000568153 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
CAPN3-218ENST00000568153 DSTQ03001 7570 aaKnown RBP2□□□□□ -2.09
CAPN3-218ENST00000568153 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
CAPN3-218ENST00000568153 SPRR2DP22532 72 aa1.97□□□□□ -2.09
CAPN3-218ENST00000568153 HMCN1Q96RW7 5635 aa1.96□□□□□ -2.1
CAPN3-218ENST00000568153 KRTAP5-10Q6L8G5 202 aa1.9□□□□□ -2.11
CAPN3-218ENST00000568153 AHNAKQ09666 5890 aaKnown RBP1.85□□□□□ -2.11
CAPN3-218ENST00000568153 MT1AP04731 61 aa1.84□□□□□ -2.11
CAPN3-218ENST00000568153 KRTAP12-4P60329 112 aa1.82□□□□□ -2.12
CAPN3-218ENST00000568153 KRTAP6-1Q3LI64 71 aa1.81□□□□□ -2.12
CAPN3-218ENST00000568153 KRTAP21-2Q3LI59 83 aa1.78□□□□□ -2.12
CAPN3-218ENST00000568153 INE1O15225 51 aa1.75□□□□□ -2.13
CAPN3-218ENST00000568153 MUC5BQ9HC84 5762 aaPredicted RBP1.75□□□□□ -2.13
CAPN3-218ENST00000568153 MUC5ACP98088 5654 aa1.74□□□□□ -2.13
CAPN3-218ENST00000568153 MT4P47944 62 aa1.7□□□□□ -2.14
CAPN3-218ENST00000568153 KRTAP6-2Q3LI66 62 aa1.68□□□□□ -2.14
CAPN3-218ENST00000568153 SYNE1Q8NF91 8797 aaKnown RBP1.67□□□□□ -2.14
CAPN3-218ENST00000568153 KRTAP20-2Q3LI61 65 aa1.65□□□□□ -2.15
CAPN3-218ENST00000568153 PRM1P04553 51 aa1.38□□□□□ -2.19
CAPN3-218ENST00000568153 PHGR1C9JFL3 82 aa1.12□□□□□ -2.23
CAPN3-218ENST00000568153 MUC16Q8WXI7 14507 aa0.91□□□□□ -2.26
CAPN3-218ENST00000568153 KRTAP21-1Q3LI58 79 aa0.89□□□□□ -2.27
Retrieved 78 of 20,778 RNA–protein pairs in 57 ms