RNA–Protein interactions for RNA: ENST00000568151.1

SPG7-217, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 4

Gene SPG7, Length 544 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-217ENST00000568151 KRTAP4-9Q9BYQ8 210 aa7.93□□□□□ -1.14
SPG7-217ENST00000568151 PSPHP1O15172 72 aa7.9□□□□□ -1.14
SPG7-217ENST00000568151 KRTAP4-3Q9BYR4 195 aa7.9□□□□□ -1.14
SPG7-217ENST00000568151 V9GYY9 64 aa7.9□□□□□ -1.14
SPG7-217ENST00000568151 KRTAP12-3P60328 96 aa7.88□□□□□ -1.15
SPG7-217ENST00000568151 Q1T7F1 81 aa7.88□□□□□ -1.15
SPG7-217ENST00000568151 KRTAP25-1Q3LHN0 102 aa7.81□□□□□ -1.16
SPG7-217ENST00000568151 K7ERS5 55 aa7.79□□□□□ -1.16
SPG7-217ENST00000568151 LCE1DQ5T752 114 aa7.75□□□□□ -1.17
SPG7-217ENST00000568151 LCE4AQ5TA78 99 aa7.75□□□□□ -1.17
SPG7-217ENST00000568151 KRTAP4-7Q9BYR0 210 aa7.75□□□□□ -1.17
SPG7-217ENST00000568151 GPR98Q8WXG9 6306 aa7.71□□□□□ -1.18
SPG7-217ENST00000568151 PCP4P48539 62 aa7.67□□□□□ -1.18
SPG7-217ENST00000568151 HMCN1Q96RW7 5635 aa7.66□□□□□ -1.18
SPG7-217ENST00000568151 MT4P47944 62 aa7.66□□□□□ -1.18
SPG7-217ENST00000568151 KRTAP5-4Q6L8H1 288 aa7.66□□□□□ -1.18
SPG7-217ENST00000568151 A6NED7 52 aa7.61□□□□□ -1.19
SPG7-217ENST00000568151 RPS28P62857 69 aaKnown RBP7.53□□□□□ -1.2
SPG7-217ENST00000568151 KRTAP23-1A1A580 65 aa7.52□□□□□ -1.21
SPG7-217ENST00000568151 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
SPG7-217ENST00000568151 CDC42SE1Q9NRR8 79 aa7.42□□□□□ -1.22
SPG7-217ENST00000568151 KRTAP19-4Q3LI73 84 aa7.41□□□□□ -1.22
SPG7-217ENST00000568151 KRTAP5-5Q701N2 237 aaPredicted RBP7.41□□□□□ -1.22
SPG7-217ENST00000568151 AHNAK2Q8IVF2 5795 aa7.39□□□□□ -1.23
SPG7-217ENST00000568151 KRTAP15-1Q3LI76 137 aa7.39□□□□□ -1.23
SPG7-217ENST00000568151 LOC100996750A0A140TA64 210 aa7.33□□□□□ -1.24
SPG7-217ENST00000568151 ROMO1P60602 79 aa7.32□□□□□ -1.24
SPG7-217ENST00000568151 LCE3CQ5T5A8 94 aa7.27□□□□□ -1.25
SPG7-217ENST00000568151 KRTAP20-2Q3LI61 65 aa7.21□□□□□ -1.26
SPG7-217ENST00000568151 SPRR5A0A1B0GTR4 108 aa7.17□□□□□ -1.26
SPG7-217ENST00000568151 KRTAP5-10Q6L8G5 202 aa7.17□□□□□ -1.26
SPG7-217ENST00000568151 SYNE1Q8NF91 8797 aaKnown RBP7.16□□□□□ -1.26
SPG7-217ENST00000568151 KRTAP12-4P60329 112 aa7.14□□□□□ -1.27
SPG7-217ENST00000568151 KRTAP5-3Q6L8H2 238 aa7.02□□□□□ -1.29
SPG7-217ENST00000568151 KRTAP9-6A8MVA2 160 aa6.9□□□□□ -1.3
SPG7-217ENST00000568151 MT1AP04731 61 aa6.9□□□□□ -1.3
SPG7-217ENST00000568151 KRTAP6-1Q3LI64 71 aa6.88□□□□□ -1.31
SPG7-217ENST00000568151 KRTAP5-7Q6L8G8 165 aa6.87□□□□□ -1.31
SPG7-217ENST00000568151 KRTAP5-2Q701N4 177 aa6.73□□□□□ -1.33
SPG7-217ENST00000568151 KRTAP9-4Q9BYQ2 154 aa6.67□□□□□ -1.34
SPG7-217ENST00000568151 BRK1Q8WUW1 75 aa6.65□□□□□ -1.34
SPG7-217ENST00000568151 KRTAP4-11Q9BYQ6 195 aa6.56□□□□□ -1.36
SPG7-217ENST00000568151 KRTAP6-2Q3LI66 62 aa6.54□□□□□ -1.36
SPG7-217ENST00000568151 KRTAP5-8O75690 187 aa6.35□□□□□ -1.39
SPG7-217ENST00000568151 MT3P25713 68 aa6.29□□□□□ -1.4
SPG7-217ENST00000568151 OBSCNQ5VST9 7968 aa6.27□□□□□ -1.41
SPG7-217ENST00000568151 PMAIP1Q13794 54 aa6.25□□□□□ -1.41
SPG7-217ENST00000568151 AHNAKQ09666 5890 aaKnown RBP6.05□□□□□ -1.44
SPG7-217ENST00000568151 MUC5BQ9HC84 5762 aaPredicted RBP6.04□□□□□ -1.44
SPG7-217ENST00000568151 KRTAP5-1Q6L8H4 278 aa6.02□□□□□ -1.45
SPG7-217ENST00000568151 MUC5ACP98088 5654 aa6□□□□□ -1.45
SPG7-217ENST00000568151 PRAC1Q96KF2 57 aa6□□□□□ -1.45
SPG7-217ENST00000568151 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
SPG7-217ENST00000568151 KRTAP9-9Q9BYP9 154 aa5.97□□□□□ -1.45
SPG7-217ENST00000568151 LCE1EQ5T753 118 aa5.77□□□□□ -1.49
SPG7-217ENST00000568151 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
SPG7-217ENST00000568151 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
SPG7-217ENST00000568151 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
SPG7-217ENST00000568151 SVIPQ8NHG7 77 aa5.42□□□□□ -1.54
SPG7-217ENST00000568151 LCE1CQ5T751 118 aa5.36□□□□□ -1.55
SPG7-217ENST00000568151 LCE3DQ9BYE3 92 aa5.24□□□□□ -1.57
SPG7-217ENST00000568151 LUZP6Q538Z0 58 aa4.99□□□□□ -1.61
SPG7-217ENST00000568151 LCE3EQ5T5B0 92 aa4.94□□□□□ -1.62
SPG7-217ENST00000568151 KRTAP4-12Q9BQ66 201 aa4.92□□□□□ -1.62
SPG7-217ENST00000568151 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.9□□□□□ -1.63
SPG7-217ENST00000568151 KRTAP5-11Q6L8G4 156 aa4.85□□□□□ -1.63
SPG7-217ENST00000568151 LCE1FQ5T754 118 aa4.68□□□□□ -1.66
SPG7-217ENST00000568151 KRTAP21-2Q3LI59 83 aa4.54□□□□□ -1.68
SPG7-217ENST00000568151 NDUFAF8A1L188 74 aa4.22□□□□□ -1.73
SPG7-217ENST00000568151 PHGR1C9JFL3 82 aa4.19□□□□□ -1.74
SPG7-217ENST00000568151 KRTAP4-4Q9BYR3 166 aa4.14□□□□□ -1.75
SPG7-217ENST00000568151 MUC19Q7Z5P9 8384 aa3.88□□□□□ -1.79
SPG7-217ENST00000568151 H3BS24 57 aa3.88□□□□□ -1.79
SPG7-217ENST00000568151 PRM1P04553 51 aa3.76□□□□□ -1.81
SPG7-217ENST00000568151 INE1O15225 51 aa3.42□□□□□ -1.86
SPG7-217ENST00000568151 A0A0A0MQY5 61 aa3.41□□□□□ -1.86
SPG7-217ENST00000568151 KRTAP21-1Q3LI58 79 aa3.13□□□□□ -1.91
SPG7-217ENST00000568151 MUC16Q8WXI7 14507 aa2.75□□□□□ -1.97
Retrieved 78 of 20,778 RNA–protein pairs in 11.3 ms