RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 KRTAP10-10P60014 251 aa2.51□□□□□ -2.01
SF3B3-210ENST00000567654 SPRR2GQ9BYE4 73 aa2.51□□□□□ -2.01
SF3B3-210ENST00000567654 CRIPTQ9P021 101 aa2.5□□□□□ -2.01
SF3B3-210ENST00000567654 KTN1-AS1Q86SY8 53 aa2.48□□□□□ -2.01
SF3B3-210ENST00000567654 K7ERS5 55 aa2.47□□□□□ -2.01
SF3B3-210ENST00000567654 CRCT1Q9UGL9 99 aa2.47□□□□□ -2.01
SF3B3-210ENST00000567654 LCE3AQ5TA76 89 aa2.46□□□□□ -2.02
SF3B3-210ENST00000567654 MT1BP07438 61 aa2.45□□□□□ -2.02
SF3B3-210ENST00000567654 KRTAP19-8Q3LI54 63 aa2.45□□□□□ -2.02
SF3B3-210ENST00000567654 ROMO1P60602 79 aa2.44□□□□□ -2.02
SF3B3-210ENST00000567654 C10orf95Q9H7T3 257 aa2.44□□□□□ -2.02
SF3B3-210ENST00000567654 FSIP2Q5CZC0 6907 aa2.42□□□□□ -2.02
SF3B3-210ENST00000567654 USH2AO75445 5202 aa2.41□□□□□ -2.02
SF3B3-210ENST00000567654 CAMK2N1Q7Z7J9 78 aa2.39□□□□□ -2.03
SF3B3-210ENST00000567654 PLAC4Q8WY50 150 aa2.38□□□□□ -2.03
SF3B3-210ENST00000567654 MT1XP80297 61 aa2.37□□□□□ -2.03
SF3B3-210ENST00000567654 SSPOA2VEC9 5147 aa2.37□□□□□ -2.03
SF3B3-210ENST00000567654 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
SF3B3-210ENST00000567654 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
SF3B3-210ENST00000567654 TNP1P09430 55 aa2.29□□□□□ -2.04
SF3B3-210ENST00000567654 KMT2DO14686 5537 aa2.27□□□□□ -2.05
SF3B3-210ENST00000567654 KRTAP5-8O75690 187 aa2.25□□□□□ -2.05
SF3B3-210ENST00000567654 KRTAP5-5Q701N2 237 aaPredicted RBP2.25□□□□□ -2.05
SF3B3-210ENST00000567654 KRTAP19-6Q3LI70 58 aa2.24□□□□□ -2.05
SF3B3-210ENST00000567654 FCGBPQ9Y6R7 5405 aaPredicted RBP2.23□□□□□ -2.05
SF3B3-210ENST00000567654 PRO2289Q9P1D8 64 aa2.23□□□□□ -2.05
SF3B3-210ENST00000567654 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
SF3B3-210ENST00000567654 KRTAP8-1Q8IUC2 63 aa2.18□□□□□ -2.06
SF3B3-210ENST00000567654 KRTAP19-5Q3LI72 72 aa2.15□□□□□ -2.07
SF3B3-210ENST00000567654 MACF1Q9UPN3 7388 aaKnown RBP2.14□□□□□ -2.07
SF3B3-210ENST00000567654 KRTAP12-3P60328 96 aa2.13□□□□□ -2.07
SF3B3-210ENST00000567654 KRTAP19-7Q3SYF9 63 aa2.12□□□□□ -2.07
SF3B3-210ENST00000567654 SYNE2Q8WXH0 6885 aaKnown RBP2.1□□□□□ -2.07
SF3B3-210ENST00000567654 SPRR5A0A1B0GTR4 108 aa2.09□□□□□ -2.07
SF3B3-210ENST00000567654 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
SF3B3-210ENST00000567654 MT1EP04732 61 aa2.07□□□□□ -2.08
SF3B3-210ENST00000567654 LCE1CQ5T751 118 aa2.07□□□□□ -2.08
SF3B3-210ENST00000567654 LCE1BQ5T7P3 118 aa2.07□□□□□ -2.08
SF3B3-210ENST00000567654 MUC12Q9UKN1 5478 aa2.06□□□□□ -2.08
SF3B3-210ENST00000567654 MT1LQ93083 61 aa2.03□□□□□ -2.08
SF3B3-210ENST00000567654 KRTAP20-1Q3LI63 56 aa2.02□□□□□ -2.09
SF3B3-210ENST00000567654 SPRR2FQ96RM1 72 aa1.99□□□□□ -2.09
SF3B3-210ENST00000567654 NEBP20929 6669 aa1.98□□□□□ -2.09
SF3B3-210ENST00000567654 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
SF3B3-210ENST00000567654 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
SF3B3-210ENST00000567654 MT1MQ8N339 61 aa1.95□□□□□ -2.1
SF3B3-210ENST00000567654 KRTAP2-3P0C7H8 128 aa1.92□□□□□ -2.1
SF3B3-210ENST00000567654 MT1GP13640 62 aa1.92□□□□□ -2.1
SF3B3-210ENST00000567654 KRTAP2-4Q9BYR9 128 aa1.92□□□□□ -2.1
SF3B3-210ENST00000567654 SPRR2EP22531 72 aa1.88□□□□□ -2.11
SF3B3-210ENST00000567654 SPRR2BP35325 72 aa1.88□□□□□ -2.11
SF3B3-210ENST00000567654 SPRR2AP35326 72 aa1.88□□□□□ -2.11
SF3B3-210ENST00000567654 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
SF3B3-210ENST00000567654 DSTQ03001 7570 aaKnown RBP1.86□□□□□ -2.11
SF3B3-210ENST00000567654 KRTAP2-1Q9BYU5 128 aa1.85□□□□□ -2.11
SF3B3-210ENST00000567654 SPRR2DP22532 72 aa1.8□□□□□ -2.12
SF3B3-210ENST00000567654 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
SF3B3-210ENST00000567654 MUC19Q7Z5P9 8384 aa1.74□□□□□ -2.13
SF3B3-210ENST00000567654 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
SF3B3-210ENST00000567654 KRTAP6-1Q3LI64 71 aa1.73□□□□□ -2.13
SF3B3-210ENST00000567654 SYNE1Q8NF91 8797 aaKnown RBP1.71□□□□□ -2.13
SF3B3-210ENST00000567654 MT1AP04731 61 aa1.71□□□□□ -2.14
SF3B3-210ENST00000567654 KRTAP12-4P60329 112 aa1.63□□□□□ -2.15
SF3B3-210ENST00000567654 AHNAK2Q8IVF2 5795 aa1.61□□□□□ -2.15
SF3B3-210ENST00000567654 HMCN1Q96RW7 5635 aa1.6□□□□□ -2.15
SF3B3-210ENST00000567654 MT4P47944 62 aa1.6□□□□□ -2.15
SF3B3-210ENST00000567654 KRTAP5-10Q6L8G5 202 aa1.58□□□□□ -2.16
SF3B3-210ENST00000567654 KRTAP6-2Q3LI66 62 aa1.57□□□□□ -2.16
SF3B3-210ENST00000567654 KRTAP20-2Q3LI61 65 aa1.55□□□□□ -2.16
SF3B3-210ENST00000567654 INE1O15225 51 aa1.54□□□□□ -2.16
SF3B3-210ENST00000567654 KRTAP21-2Q3LI59 83 aa1.5□□□□□ -2.17
SF3B3-210ENST00000567654 AHNAKQ09666 5890 aaKnown RBP1.33□□□□□ -2.2
SF3B3-210ENST00000567654 MUC5ACP98088 5654 aa1.32□□□□□ -2.2
SF3B3-210ENST00000567654 PRM1P04553 51 aa1.31□□□□□ -2.2
SF3B3-210ENST00000567654 MUC5BQ9HC84 5762 aaPredicted RBP1.31□□□□□ -2.2
SF3B3-210ENST00000567654 PHGR1C9JFL3 82 aa0.94□□□□□ -2.26
SF3B3-210ENST00000567654 MUC16Q8WXI7 14507 aa0.87□□□□□ -2.27
SF3B3-210ENST00000567654 KRTAP21-1Q3LI58 79 aa0.8□□□□□ -2.28
Retrieved 78 of 20,778 RNA–protein pairs in 54.7 ms