RNA–Protein interactions for RNA: ENST00000567279.5

BBS4-213, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 2

Gene BBS4, Length 1,876 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-213ENST00000567279 KRTAP9-9Q9BYP9 154 aa4.37□□□□□ -1.71
BBS4-213ENST00000567279 CRCT1Q9UGL9 99 aa4.34□□□□□ -1.71
BBS4-213ENST00000567279 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.32□□□□□ -1.72
BBS4-213ENST00000567279 KRTAP19-7Q3SYF9 63 aa4.32□□□□□ -1.72
BBS4-213ENST00000567279 MT1EP04732 61 aa4.24□□□□□ -1.73
BBS4-213ENST00000567279 SPRR5A0A1B0GTR4 108 aa4.2□□□□□ -1.74
BBS4-213ENST00000567279 LCE3BQ5TA77 95 aa4.2□□□□□ -1.74
BBS4-213ENST00000567279 MT1LQ93083 61 aa4.17□□□□□ -1.74
BBS4-213ENST00000567279 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
BBS4-213ENST00000567279 SPRR2FQ96RM1 72 aa4.13□□□□□ -1.75
BBS4-213ENST00000567279 MACF1Q9UPN3 7388 aaKnown RBP4.11□□□□□ -1.75
BBS4-213ENST00000567279 LCE5AQ5TCM9 118 aa4.1□□□□□ -1.75
BBS4-213ENST00000567279 MUC12Q9UKN1 5478 aa4.09□□□□□ -1.76
BBS4-213ENST00000567279 KRTAP4-7Q9BYR0 210 aa4.07□□□□□ -1.76
BBS4-213ENST00000567279 KRTAP19-3Q7Z4W3 81 aa4.07□□□□□ -1.76
BBS4-213ENST00000567279 KRTAP5-9P26371 169 aa4.02□□□□□ -1.77
BBS4-213ENST00000567279 MT1GP13640 62 aa4.01□□□□□ -1.77
BBS4-213ENST00000567279 MT1MQ8N339 61 aa4□□□□□ -1.77
BBS4-213ENST00000567279 SYNE2Q8WXH0 6885 aaKnown RBP3.97□□□□□ -1.77
BBS4-213ENST00000567279 KRTAP4-3Q9BYR4 195 aa3.95□□□□□ -1.78
BBS4-213ENST00000567279 KRTAP9-6A8MVA2 160 aa3.94□□□□□ -1.78
BBS4-213ENST00000567279 KRTAP6-3Q3LI67 103 aa3.93□□□□□ -1.78
BBS4-213ENST00000567279 LCE1DQ5T752 114 aa3.92□□□□□ -1.78
BBS4-213ENST00000567279 LCE1AQ5T7P2 110 aa3.92□□□□□ -1.78
BBS4-213ENST00000567279 MDN1Q9NU22 5596 aa3.92□□□□□ -1.78
BBS4-213ENST00000567279 SPRR2EP22531 72 aa3.91□□□□□ -1.78
BBS4-213ENST00000567279 SPRR2BP35325 72 aa3.91□□□□□ -1.78
BBS4-213ENST00000567279 SPRR2AP35326 72 aa3.91□□□□□ -1.78
BBS4-213ENST00000567279 KRTAP4-9Q9BYQ8 210 aa3.77□□□□□ -1.81
BBS4-213ENST00000567279 SPRR2DP22532 72 aa3.76□□□□□ -1.81
BBS4-213ENST00000567279 KRTAP4-11Q9BYQ6 195 aa3.7□□□□□ -1.82
BBS4-213ENST00000567279 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
BBS4-213ENST00000567279 INE1O15225 51 aa3.66□□□□□ -1.82
BBS4-213ENST00000567279 KRTAP2-3P0C7H8 128 aa3.64□□□□□ -1.83
BBS4-213ENST00000567279 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
BBS4-213ENST00000567279 KRTAP2-4Q9BYR9 128 aa3.64□□□□□ -1.83
BBS4-213ENST00000567279 KRTAP2-1Q9BYU5 128 aa3.64□□□□□ -1.83
BBS4-213ENST00000567279 NEBP20929 6669 aa3.59□□□□□ -1.83
BBS4-213ENST00000567279 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
BBS4-213ENST00000567279 MT1AP04731 61 aa3.54□□□□□ -1.84
BBS4-213ENST00000567279 KRTAP6-1Q3LI64 71 aa3.52□□□□□ -1.85
BBS4-213ENST00000567279 KRTAP5-3Q6L8H2 238 aa3.52□□□□□ -1.85
BBS4-213ENST00000567279 MT3P25713 68 aa3.47□□□□□ -1.85
BBS4-213ENST00000567279 LCE1FQ5T754 118 aa3.4□□□□□ -1.87
BBS4-213ENST00000567279 KRTAP2-2Q9BYT5 123 aa3.39□□□□□ -1.87
BBS4-213ENST00000567279 SYNE1Q8NF91 8797 aaKnown RBP3.38□□□□□ -1.87
BBS4-213ENST00000567279 KRTAP20-1Q3LI63 56 aa3.37□□□□□ -1.87
BBS4-213ENST00000567279 KRTAP5-4Q6L8H1 288 aa3.37□□□□□ -1.87
BBS4-213ENST00000567279 KRTAP12-4P60329 112 aa3.31□□□□□ -1.88
BBS4-213ENST00000567279 MT4P47944 62 aa3.28□□□□□ -1.88
BBS4-213ENST00000567279 KRTAP6-2Q3LI66 62 aa3.23□□□□□ -1.89
BBS4-213ENST00000567279 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
BBS4-213ENST00000567279 KRTAP20-2Q3LI61 65 aa3.18□□□□□ -1.9
BBS4-213ENST00000567279 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
BBS4-213ENST00000567279 LCE3DQ9BYE3 92 aa3.12□□□□□ -1.91
BBS4-213ENST00000567279 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
BBS4-213ENST00000567279 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
BBS4-213ENST00000567279 OBSCNQ5VST9 7968 aa2.86□□□□□ -1.95
BBS4-213ENST00000567279 AHNAK2Q8IVF2 5795 aa2.78□□□□□ -1.96
BBS4-213ENST00000567279 LCE1EQ5T753 118 aa2.73□□□□□ -1.97
BBS4-213ENST00000567279 PRM1P04553 51 aa2.71□□□□□ -1.98
BBS4-213ENST00000567279 KRTAP5-1Q6L8H4 278 aa2.65□□□□□ -1.98
BBS4-213ENST00000567279 LCE1BQ5T7P3 118 aa2.63□□□□□ -1.99
BBS4-213ENST00000567279 KRTAP5-10Q6L8G5 202 aa2.63□□□□□ -1.99
BBS4-213ENST00000567279 MUC5ACP98088 5654 aa2.62□□□□□ -1.99
BBS4-213ENST00000567279 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
BBS4-213ENST00000567279 KRTAP5-7Q6L8G8 165 aa2.59□□□□□ -1.99
BBS4-213ENST00000567279 LCE1CQ5T751 118 aa2.55□□□□□ -2
BBS4-213ENST00000567279 KRTAP5-11Q6L8G4 156 aa2.54□□□□□ -2
BBS4-213ENST00000567279 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.52□□□□□ -2.01
BBS4-213ENST00000567279 AHNAKQ09666 5890 aaKnown RBP2.44□□□□□ -2.02
BBS4-213ENST00000567279 MUC5BQ9HC84 5762 aaPredicted RBP2.39□□□□□ -2.03
BBS4-213ENST00000567279 KRTAP21-2Q3LI59 83 aa2.28□□□□□ -2.04
BBS4-213ENST00000567279 KRTAP4-4Q9BYR3 166 aa2.07□□□□□ -2.08
BBS4-213ENST00000567279 PHGR1C9JFL3 82 aa1.93□□□□□ -2.1
BBS4-213ENST00000567279 MUC19Q7Z5P9 8384 aa1.71□□□□□ -2.14
BBS4-213ENST00000567279 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
BBS4-213ENST00000567279 MUC16Q8WXI7 14507 aa1.28□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 8.6 ms