RNA–Protein interactions for RNA: ENST00000567258.1

LINC00564-201, long intergenic non-protein coding RNA 564, humanhuman

BASIC

Gene LINC00564, Length 1,119 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00564-201ENST00000567258 A0A1B0GU33 70 aa3.93□□□□□ -1.78
LINC00564-201ENST00000567258 COX7CP15954 63 aa3.93□□□□□ -1.78
LINC00564-201ENST00000567258 SPATA8Q6RVD6 105 aa3.93□□□□□ -1.78
LINC00564-201ENST00000567258 PCP4P48539 62 aa3.92□□□□□ -1.78
LINC00564-201ENST00000567258 LCE3AQ5TA76 89 aa3.91□□□□□ -1.78
LINC00564-201ENST00000567258 A0A1B0GU69 56 aa3.87□□□□□ -1.79
LINC00564-201ENST00000567258 SMIM26A0A096LP01 95 aa3.86□□□□□ -1.79
LINC00564-201ENST00000567258 H7BZZ5 65 aa3.85□□□□□ -1.79
LINC00564-201ENST00000567258 MT1EP04732 61 aa3.84□□□□□ -1.79
LINC00564-201ENST00000567258 KRTAP19-7Q3SYF9 63 aa3.84□□□□□ -1.79
LINC00564-201ENST00000567258 KRTAP19-3Q7Z4W3 81 aa3.84□□□□□ -1.79
LINC00564-201ENST00000567258 KRTAP12-1P59990 96 aa3.83□□□□□ -1.8
LINC00564-201ENST00000567258 PP632Q6XCG6 107 aa3.8□□□□□ -1.8
LINC00564-201ENST00000567258 CYSTM1Q9H1C7 97 aa3.8□□□□□ -1.8
LINC00564-201ENST00000567258 ANAPC13Q9BS18 74 aa3.79□□□□□ -1.8
LINC00564-201ENST00000567258 KRTAP19-5Q3LI72 72 aa3.78□□□□□ -1.8
LINC00564-201ENST00000567258 MT1GP13640 62 aa3.77□□□□□ -1.81
LINC00564-201ENST00000567258 PRR15LQ9BU68 103 aa3.77□□□□□ -1.81
LINC00564-201ENST00000567258 DSTQ03001 7570 aaKnown RBP3.77□□□□□ -1.81
LINC00564-201ENST00000567258 A8MU10 97 aa3.75□□□□□ -1.81
LINC00564-201ENST00000567258 TNP1P09430 55 aa3.75□□□□□ -1.81
LINC00564-201ENST00000567258 ATP5EP56381 51 aaPredicted RBP3.71□□□□□ -1.82
LINC00564-201ENST00000567258 LCE3EQ5T5B0 92 aa3.7□□□□□ -1.82
LINC00564-201ENST00000567258 C10orf95Q9H7T3 257 aa3.68□□□□□ -1.82
LINC00564-201ENST00000567258 MT1MQ8N339 61 aa3.67□□□□□ -1.82
LINC00564-201ENST00000567258 MT1LQ93083 61 aa3.66□□□□□ -1.82
LINC00564-201ENST00000567258 CCDC179H3BU77 68 aa3.65□□□□□ -1.83
LINC00564-201ENST00000567258 LINC01558Q9Y6Z2 57 aa3.63□□□□□ -1.83
LINC00564-201ENST00000567258 KRTAP5-8O75690 187 aa3.62□□□□□ -1.83
LINC00564-201ENST00000567258 UQCR11O14957 56 aa3.61□□□□□ -1.83
LINC00564-201ENST00000567258 MT4P47944 62 aa3.61□□□□□ -1.83
LINC00564-201ENST00000567258 KRTAP5-5Q701N2 237 aaPredicted RBP3.58□□□□□ -1.84
LINC00564-201ENST00000567258 TMEM258P61165 79 aa3.56□□□□□ -1.84
LINC00564-201ENST00000567258 KRTAP12-3P60328 96 aa3.55□□□□□ -1.84
LINC00564-201ENST00000567258 K7ERS5 55 aa3.54□□□□□ -1.84
LINC00564-201ENST00000567258 SVIPQ8NHG7 77 aa3.54□□□□□ -1.84
LINC00564-201ENST00000567258 GPR98Q8WXG9 6306 aa3.53□□□□□ -1.85
LINC00564-201ENST00000567258 MIR22HGQ0VDD5 57 aa3.51□□□□□ -1.85
LINC00564-201ENST00000567258 HMCN1Q96RW7 5635 aa3.5□□□□□ -1.85
LINC00564-201ENST00000567258 KRTAP25-1Q3LHN0 102 aa3.49□□□□□ -1.85
LINC00564-201ENST00000567258 NDUFAF8A1L188 74 aa3.45□□□□□ -1.86
LINC00564-201ENST00000567258 V9GYY9 64 aa3.44□□□□□ -1.86
LINC00564-201ENST00000567258 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
LINC00564-201ENST00000567258 LCE1BQ5T7P3 118 aa3.43□□□□□ -1.86
LINC00564-201ENST00000567258 PSPHP1O15172 72 aa3.39□□□□□ -1.87
LINC00564-201ENST00000567258 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
LINC00564-201ENST00000567258 KRTAP5-10Q6L8G5 202 aa3.37□□□□□ -1.87
LINC00564-201ENST00000567258 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
LINC00564-201ENST00000567258 Q1T7F1 81 aa3.34□□□□□ -1.87
LINC00564-201ENST00000567258 SPRR5A0A1B0GTR4 108 aa3.33□□□□□ -1.88
LINC00564-201ENST00000567258 KRTAP20-2Q3LI61 65 aa3.33□□□□□ -1.88
LINC00564-201ENST00000567258 A6NED7 52 aa3.31□□□□□ -1.88
LINC00564-201ENST00000567258 CDC42SE1Q9NRR8 79 aa3.29□□□□□ -1.88
LINC00564-201ENST00000567258 KRTAP5-7Q6L8G8 165 aa3.27□□□□□ -1.89
LINC00564-201ENST00000567258 PRAC1Q96KF2 57 aa3.25□□□□□ -1.89
LINC00564-201ENST00000567258 RPS28P62857 69 aaKnown RBP3.24□□□□□ -1.89
LINC00564-201ENST00000567258 ROMO1P60602 79 aa3.2□□□□□ -1.9
LINC00564-201ENST00000567258 SYNE1Q8NF91 8797 aaKnown RBP3.13□□□□□ -1.91
LINC00564-201ENST00000567258 MT1AP04731 61 aa3.13□□□□□ -1.91
LINC00564-201ENST00000567258 KRTAP6-1Q3LI64 71 aa3.1□□□□□ -1.91
LINC00564-201ENST00000567258 KRTAP6-2Q3LI66 62 aa2.99□□□□□ -1.93
LINC00564-201ENST00000567258 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
LINC00564-201ENST00000567258 LCE3DQ9BYE3 92 aa2.8□□□□□ -1.96
LINC00564-201ENST00000567258 MUC5ACP98088 5654 aa2.78□□□□□ -1.96
LINC00564-201ENST00000567258 MUC5BQ9HC84 5762 aaPredicted RBP2.76□□□□□ -1.97
LINC00564-201ENST00000567258 BRK1Q8WUW1 75 aa2.76□□□□□ -1.97
LINC00564-201ENST00000567258 AHNAKQ09666 5890 aaKnown RBP2.73□□□□□ -1.97
LINC00564-201ENST00000567258 PMAIP1Q13794 54 aa2.59□□□□□ -1.99
LINC00564-201ENST00000567258 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
LINC00564-201ENST00000567258 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
LINC00564-201ENST00000567258 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
LINC00564-201ENST00000567258 KTN1-AS1Q86SY8 53 aa2.22□□□□□ -2.05
LINC00564-201ENST00000567258 PHGR1C9JFL3 82 aa2.01□□□□□ -2.09
LINC00564-201ENST00000567258 PRM1P04553 51 aa1.62□□□□□ -2.15
LINC00564-201ENST00000567258 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
LINC00564-201ENST00000567258 INE1O15225 51 aa1.3□□□□□ -2.2
LINC00564-201ENST00000567258 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 115.3 ms