RNA–Protein interactions for RNA: ENST00000566889.5

FANCA-221, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-221ENST00000566889 MT1GP13640 62 aa7.83□□□□□ -1.16
FANCA-221ENST00000566889 KRTAP4-3Q9BYR4 195 aa7.76□□□□□ -1.17
FANCA-221ENST00000566889 MT1MQ8N339 61 aa7.67□□□□□ -1.18
FANCA-221ENST00000566889 KRTAP19-3Q7Z4W3 81 aa7.59□□□□□ -1.19
FANCA-221ENST00000566889 CRCT1Q9UGL9 99 aa7.58□□□□□ -1.2
FANCA-221ENST00000566889 LCE2DQ5TA82 110 aaPredicted RBP7.54□□□□□ -1.2
FANCA-221ENST00000566889 SSPOA2VEC9 5147 aa7.51□□□□□ -1.21
FANCA-221ENST00000566889 MT1AP04731 61 aa7.5□□□□□ -1.21
FANCA-221ENST00000566889 FSIP2Q5CZC0 6907 aa7.49□□□□□ -1.21
FANCA-221ENST00000566889 KRTAP19-6Q3LI70 58 aa7.47□□□□□ -1.21
FANCA-221ENST00000566889 LCE3BQ5TA77 95 aa7.41□□□□□ -1.22
FANCA-221ENST00000566889 KRTAP9-2Q9BYQ4 174 aa7.37□□□□□ -1.23
FANCA-221ENST00000566889 KRTAP4-9Q9BYQ8 210 aa7.32□□□□□ -1.24
FANCA-221ENST00000566889 LCE3DQ9BYE3 92 aa7.27□□□□□ -1.25
FANCA-221ENST00000566889 LCE3EQ5T5B0 92 aa7.27□□□□□ -1.25
FANCA-221ENST00000566889 LCE5AQ5TCM9 118 aa7.23□□□□□ -1.25
FANCA-221ENST00000566889 PRM1P04553 51 aa7.21□□□□□ -1.26
FANCA-221ENST00000566889 KRTAP5-5Q701N2 237 aaPredicted RBP7.2□□□□□ -1.26
FANCA-221ENST00000566889 KRTAP9-7A8MTY7 169 aa7.16□□□□□ -1.26
FANCA-221ENST00000566889 FCGBPQ9Y6R7 5405 aaPredicted RBP7.15□□□□□ -1.27
FANCA-221ENST00000566889 MUC12Q9UKN1 5478 aa7.1□□□□□ -1.27
FANCA-221ENST00000566889 KRTAP6-1Q3LI64 71 aa7.09□□□□□ -1.27
FANCA-221ENST00000566889 SYNE1Q8NF91 8797 aaKnown RBP7.07□□□□□ -1.28
FANCA-221ENST00000566889 SPRR2FQ96RM1 72 aa6.9□□□□□ -1.3
FANCA-221ENST00000566889 DSTQ03001 7570 aaKnown RBP6.84□□□□□ -1.31
FANCA-221ENST00000566889 KRTAP9-6A0A140TA67 174 aa6.83□□□□□ -1.32
FANCA-221ENST00000566889 MACF1Q9UPN3 7388 aaKnown RBP6.8□□□□□ -1.32
FANCA-221ENST00000566889 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
FANCA-221ENST00000566889 KRTAP6-3Q3LI67 103 aa6.75□□□□□ -1.33
FANCA-221ENST00000566889 SYNE2Q8WXH0 6885 aaKnown RBP6.6□□□□□ -1.35
FANCA-221ENST00000566889 KRTAP9-4Q9BYQ2 154 aa6.57□□□□□ -1.36
FANCA-221ENST00000566889 KRTAP2-2Q9BYT5 123 aa6.49□□□□□ -1.37
FANCA-221ENST00000566889 KRTAP5-9P26371 169 aa6.45□□□□□ -1.38
FANCA-221ENST00000566889 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.4□□□□□ -1.38
FANCA-221ENST00000566889 LCE1AQ5T7P2 110 aa6.4□□□□□ -1.38
FANCA-221ENST00000566889 MDN1Q9NU22 5596 aa6.36□□□□□ -1.39
FANCA-221ENST00000566889 SPRR2AP35326 72 aa6.3□□□□□ -1.4
FANCA-221ENST00000566889 MT3P25713 68 aa6.3□□□□□ -1.4
FANCA-221ENST00000566889 SPRR2EP22531 72 aa6.22□□□□□ -1.41
FANCA-221ENST00000566889 SPRR2BP35325 72 aa6.22□□□□□ -1.41
FANCA-221ENST00000566889 SPRR2DP22532 72 aa5.98□□□□□ -1.45
FANCA-221ENST00000566889 NEBP20929 6669 aa5.84□□□□□ -1.47
FANCA-221ENST00000566889 OBSCNQ5VST9 7968 aa5.82□□□□□ -1.48
FANCA-221ENST00000566889 LCE1EQ5T753 118 aa5.75□□□□□ -1.49
FANCA-221ENST00000566889 LCE1DQ5T752 114 aa5.59□□□□□ -1.51
FANCA-221ENST00000566889 KRTAP5-4Q6L8H1 288 aa5.54□□□□□ -1.52
FANCA-221ENST00000566889 KRTAP4-6Q9BYQ5 205 aa5.46□□□□□ -1.54
FANCA-221ENST00000566889 KRTAP4-11Q9BYQ6 195 aa5.33□□□□□ -1.56
FANCA-221ENST00000566889 KRTAP5-2Q701N4 177 aa5.32□□□□□ -1.56
FANCA-221ENST00000566889 KRTAP20-1Q3LI63 56 aa5.31□□□□□ -1.56
FANCA-221ENST00000566889 MUC5ACP98088 5654 aa5.27□□□□□ -1.57
FANCA-221ENST00000566889 LCE4AQ5TA78 99 aa5.25□□□□□ -1.57
FANCA-221ENST00000566889 MT4P47944 62 aa5.23□□□□□ -1.57
FANCA-221ENST00000566889 KRTAP5-10Q6L8G5 202 aa5.23□□□□□ -1.57
FANCA-221ENST00000566889 KRTAP20-2Q3LI61 65 aa5.17□□□□□ -1.58
FANCA-221ENST00000566889 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
FANCA-221ENST00000566889 KRTAP5-1Q6L8H4 278 aa5.08□□□□□ -1.6
FANCA-221ENST00000566889 LCE1BQ5T7P3 118 aa4.9□□□□□ -1.63
FANCA-221ENST00000566889 KRTAP5-3Q6L8H2 238 aa4.89□□□□□ -1.63
FANCA-221ENST00000566889 LCE1CQ5T751 118 aa4.71□□□□□ -1.66
FANCA-221ENST00000566889 KRTAP21-1Q3LI58 79 aa4.68□□□□□ -1.66
FANCA-221ENST00000566889 KRTAP4-2Q9BYR5 136 aa4.66□□□□□ -1.66
FANCA-221ENST00000566889 KRTAP4-12Q9BQ66 201 aa4.59□□□□□ -1.67
FANCA-221ENST00000566889 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
FANCA-221ENST00000566889 KRTAP21-2Q3LI59 83 aa4.56□□□□□ -1.68
FANCA-221ENST00000566889 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.53□□□□□ -1.68
FANCA-221ENST00000566889 LCE1FQ5T754 118 aa4.42□□□□□ -1.7
FANCA-221ENST00000566889 AHNAK2Q8IVF2 5795 aa4.4□□□□□ -1.7
FANCA-221ENST00000566889 KRTAP5-8O75690 187 aa4.21□□□□□ -1.74
FANCA-221ENST00000566889 GPR98Q8WXG9 6306 aa4.12□□□□□ -1.75
FANCA-221ENST00000566889 KRTAP4-4Q9BYR3 166 aa4.08□□□□□ -1.76
FANCA-221ENST00000566889 KRTAP5-7Q6L8G8 165 aa4.06□□□□□ -1.76
FANCA-221ENST00000566889 MUC19Q7Z5P9 8384 aa4.02□□□□□ -1.77
FANCA-221ENST00000566889 KRTAP5-11Q6L8G4 156 aa3.97□□□□□ -1.77
FANCA-221ENST00000566889 MUC5BQ9HC84 5762 aaPredicted RBP3.84□□□□□ -1.79
FANCA-221ENST00000566889 PHGR1C9JFL3 82 aa3.42□□□□□ -1.86
FANCA-221ENST00000566889 AHNAKQ09666 5890 aaKnown RBP3.31□□□□□ -1.88
FANCA-221ENST00000566889 MUC16Q8WXI7 14507 aa2.41□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 139.2 ms