RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 KRTAP4-9Q9BYQ8 210 aa6.65□□□□□ -1.34
IFT140-208ENST00000566818 TMEM258P61165 79 aa6.61□□□□□ -1.35
IFT140-208ENST00000566818 UQCR11O14957 56 aa6.58□□□□□ -1.36
IFT140-208ENST00000566818 LCE4AQ5TA78 99 aa6.54□□□□□ -1.36
IFT140-208ENST00000566818 LCE1DQ5T752 114 aa6.52□□□□□ -1.37
IFT140-208ENST00000566818 HMCN1Q96RW7 5635 aa6.51□□□□□ -1.37
IFT140-208ENST00000566818 KRTAP4-3Q9BYR4 195 aa6.46□□□□□ -1.38
IFT140-208ENST00000566818 KRTAP12-3P60328 96 aa6.45□□□□□ -1.38
IFT140-208ENST00000566818 MT4P47944 62 aa6.44□□□□□ -1.38
IFT140-208ENST00000566818 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
IFT140-208ENST00000566818 K7ERS5 55 aa6.37□□□□□ -1.39
IFT140-208ENST00000566818 KRTAP5-4Q6L8H1 288 aa6.37□□□□□ -1.39
IFT140-208ENST00000566818 KRTAP25-1Q3LHN0 102 aa6.36□□□□□ -1.39
IFT140-208ENST00000566818 AHNAK2Q8IVF2 5795 aa6.32□□□□□ -1.4
IFT140-208ENST00000566818 KRTAP4-7Q9BYR0 210 aa6.3□□□□□ -1.4
IFT140-208ENST00000566818 V9GYY9 64 aa6.3□□□□□ -1.4
IFT140-208ENST00000566818 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
IFT140-208ENST00000566818 PSPHP1O15172 72 aa6.23□□□□□ -1.41
IFT140-208ENST00000566818 KRTAP4-6Q9BYQ5 205 aa6.22□□□□□ -1.41
IFT140-208ENST00000566818 Q1T7F1 81 aa6.19□□□□□ -1.42
IFT140-208ENST00000566818 PRO0628Q9UI54 55 aa6.13□□□□□ -1.43
IFT140-208ENST00000566818 KRTAP19-4Q3LI73 84 aa6.12□□□□□ -1.43
IFT140-208ENST00000566818 KRTAP23-1A1A580 65 aa6.11□□□□□ -1.43
IFT140-208ENST00000566818 KRTAP5-5Q701N2 237 aaPredicted RBP6.1□□□□□ -1.43
IFT140-208ENST00000566818 KRTAP5-10Q6L8G5 202 aa6.07□□□□□ -1.44
IFT140-208ENST00000566818 A6NED7 52 aa6.06□□□□□ -1.44
IFT140-208ENST00000566818 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
IFT140-208ENST00000566818 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
IFT140-208ENST00000566818 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
IFT140-208ENST00000566818 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
IFT140-208ENST00000566818 CDC42SE1Q9NRR8 79 aa5.99□□□□□ -1.45
IFT140-208ENST00000566818 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
IFT140-208ENST00000566818 LCE3CQ5T5A8 94 aa5.93□□□□□ -1.46
IFT140-208ENST00000566818 KRTAP5-3Q6L8H2 238 aa5.92□□□□□ -1.46
IFT140-208ENST00000566818 ROMO1P60602 79 aa5.86□□□□□ -1.47
IFT140-208ENST00000566818 KRTAP5-7Q6L8G8 165 aa5.86□□□□□ -1.47
IFT140-208ENST00000566818 SYNE1Q8NF91 8797 aaKnown RBP5.83□□□□□ -1.48
IFT140-208ENST00000566818 PMAIP1Q13794 54 aa5.78□□□□□ -1.48
IFT140-208ENST00000566818 MT1AP04731 61 aa5.7□□□□□ -1.5
IFT140-208ENST00000566818 BRK1Q8WUW1 75 aa5.65□□□□□ -1.5
IFT140-208ENST00000566818 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
IFT140-208ENST00000566818 KRTAP5-2Q701N4 177 aa5.57□□□□□ -1.52
IFT140-208ENST00000566818 KRTAP9-6A8MVA2 160 aa5.54□□□□□ -1.52
IFT140-208ENST00000566818 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
IFT140-208ENST00000566818 H3BS24 57 aa5.51□□□□□ -1.53
IFT140-208ENST00000566818 KRTAP4-11Q9BYQ6 195 aa5.51□□□□□ -1.53
IFT140-208ENST00000566818 KRTAP9-4Q9BYQ2 154 aa5.49□□□□□ -1.53
IFT140-208ENST00000566818 KRTAP6-2Q3LI66 62 aa5.4□□□□□ -1.54
IFT140-208ENST00000566818 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
IFT140-208ENST00000566818 AHNAKQ09666 5890 aaKnown RBP5.26□□□□□ -1.57
IFT140-208ENST00000566818 MT3P25713 68 aa5.23□□□□□ -1.57
IFT140-208ENST00000566818 MUC5BQ9HC84 5762 aaPredicted RBP5.22□□□□□ -1.57
IFT140-208ENST00000566818 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
IFT140-208ENST00000566818 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
IFT140-208ENST00000566818 KRTAP9-9Q9BYP9 154 aa5.09□□□□□ -1.59
IFT140-208ENST00000566818 A0A0A0MQY5 61 aa5.07□□□□□ -1.6
IFT140-208ENST00000566818 KRTAP5-1Q6L8H4 278 aa4.99□□□□□ -1.61
IFT140-208ENST00000566818 PRAC1Q96KF2 57 aa4.87□□□□□ -1.63
IFT140-208ENST00000566818 LCE1EQ5T753 118 aa4.8□□□□□ -1.64
IFT140-208ENST00000566818 LCE1BQ5T7P3 118 aa4.52□□□□□ -1.69
IFT140-208ENST00000566818 KRTAP4-2Q9BYR5 136 aa4.51□□□□□ -1.69
IFT140-208ENST00000566818 LUZP6Q538Z0 58 aa4.49□□□□□ -1.69
IFT140-208ENST00000566818 LCE1CQ5T751 118 aa4.45□□□□□ -1.7
IFT140-208ENST00000566818 NDUFAF8A1L188 74 aa4.41□□□□□ -1.7
IFT140-208ENST00000566818 LCE3DQ9BYE3 92 aa4.28□□□□□ -1.72
IFT140-208ENST00000566818 KRTAP4-12Q9BQ66 201 aa4.09□□□□□ -1.75
IFT140-208ENST00000566818 KRTAP5-11Q6L8G4 156 aa4.04□□□□□ -1.76
IFT140-208ENST00000566818 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.04□□□□□ -1.76
IFT140-208ENST00000566818 LCE3EQ5T5B0 92 aa4.01□□□□□ -1.77
IFT140-208ENST00000566818 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
IFT140-208ENST00000566818 INE1O15225 51 aa3.82□□□□□ -1.8
IFT140-208ENST00000566818 KRTAP21-2Q3LI59 83 aa3.7□□□□□ -1.82
IFT140-208ENST00000566818 PHGR1C9JFL3 82 aa3.56□□□□□ -1.84
IFT140-208ENST00000566818 KRTAP4-4Q9BYR3 166 aa3.39□□□□□ -1.87
IFT140-208ENST00000566818 MUC19Q7Z5P9 8384 aa3.19□□□□□ -1.9
IFT140-208ENST00000566818 PRM1P04553 51 aa2.97□□□□□ -1.93
IFT140-208ENST00000566818 KRTAP21-1Q3LI58 79 aa2.73□□□□□ -1.97
IFT140-208ENST00000566818 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 104.4 ms