RNA–Protein interactions for RNA: ENST00000566581.5

LPCAT4-206, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 1 (best)

Gene LPCAT4, Length 915 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-206ENST00000566581 PCP4P48539 62 aa4.44□□□□□ -1.7
LPCAT4-206ENST00000566581 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
LPCAT4-206ENST00000566581 KRTAP4-9Q9BYQ8 210 aa4.4□□□□□ -1.71
LPCAT4-206ENST00000566581 MIR22HGQ0VDD5 57 aa4.39□□□□□ -1.71
LPCAT4-206ENST00000566581 KRTAP12-3P60328 96 aa4.37□□□□□ -1.71
LPCAT4-206ENST00000566581 LCE4AQ5TA78 99 aa4.36□□□□□ -1.71
LPCAT4-206ENST00000566581 V9GYY9 64 aa4.36□□□□□ -1.71
LPCAT4-206ENST00000566581 KRTAP25-1Q3LHN0 102 aa4.34□□□□□ -1.71
LPCAT4-206ENST00000566581 KRTAP4-3Q9BYR4 195 aa4.34□□□□□ -1.71
LPCAT4-206ENST00000566581 Q1T7F1 81 aa4.33□□□□□ -1.72
LPCAT4-206ENST00000566581 K7ERS5 55 aa4.32□□□□□ -1.72
LPCAT4-206ENST00000566581 LCE1DQ5T752 114 aa4.32□□□□□ -1.72
LPCAT4-206ENST00000566581 PSPHP1O15172 72 aa4.3□□□□□ -1.72
LPCAT4-206ENST00000566581 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
LPCAT4-206ENST00000566581 MT4P47944 62 aa4.25□□□□□ -1.73
LPCAT4-206ENST00000566581 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
LPCAT4-206ENST00000566581 KRTAP4-7Q9BYR0 210 aa4.25□□□□□ -1.73
LPCAT4-206ENST00000566581 KRTAP23-1A1A580 65 aa4.21□□□□□ -1.74
LPCAT4-206ENST00000566581 KRTAP19-4Q3LI73 84 aa4.21□□□□□ -1.74
LPCAT4-206ENST00000566581 A6NED7 52 aa4.16□□□□□ -1.74
LPCAT4-206ENST00000566581 KRTAP4-6Q9BYQ5 205 aa4.16□□□□□ -1.74
LPCAT4-206ENST00000566581 RPS28P62857 69 aaKnown RBP4.12□□□□□ -1.75
LPCAT4-206ENST00000566581 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
LPCAT4-206ENST00000566581 KRTAP15-1Q3LI76 137 aa4.1□□□□□ -1.75
LPCAT4-206ENST00000566581 AHNAK2Q8IVF2 5795 aa4.09□□□□□ -1.76
LPCAT4-206ENST00000566581 CDC42SE1Q9NRR8 79 aa4.08□□□□□ -1.76
LPCAT4-206ENST00000566581 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
LPCAT4-206ENST00000566581 SPRR5A0A1B0GTR4 108 aa4.03□□□□□ -1.76
LPCAT4-206ENST00000566581 LCE3CQ5T5A8 94 aa4.03□□□□□ -1.76
LPCAT4-206ENST00000566581 ROMO1P60602 79 aa4.02□□□□□ -1.77
LPCAT4-206ENST00000566581 KRTAP20-2Q3LI61 65 aa4.02□□□□□ -1.77
LPCAT4-206ENST00000566581 KRTAP5-10Q6L8G5 202 aa4.02□□□□□ -1.77
LPCAT4-206ENST00000566581 KRTAP12-4P60329 112 aa4.01□□□□□ -1.77
LPCAT4-206ENST00000566581 SYNE1Q8NF91 8797 aaKnown RBP3.93□□□□□ -1.78
LPCAT4-206ENST00000566581 KRTAP5-3Q6L8H2 238 aa3.93□□□□□ -1.78
LPCAT4-206ENST00000566581 A0A0A0MQY5 61 aa3.87□□□□□ -1.79
LPCAT4-206ENST00000566581 KRTAP5-7Q6L8G8 165 aa3.87□□□□□ -1.79
LPCAT4-206ENST00000566581 H3BS24 57 aa3.86□□□□□ -1.79
LPCAT4-206ENST00000566581 MT1AP04731 61 aa3.83□□□□□ -1.8
LPCAT4-206ENST00000566581 KRTAP6-1Q3LI64 71 aa3.8□□□□□ -1.8
LPCAT4-206ENST00000566581 KRTAP9-6A8MVA2 160 aa3.79□□□□□ -1.8
LPCAT4-206ENST00000566581 KRTAP5-2Q701N4 177 aa3.75□□□□□ -1.81
LPCAT4-206ENST00000566581 KRTAP9-4Q9BYQ2 154 aa3.72□□□□□ -1.81
LPCAT4-206ENST00000566581 PRO0628Q9UI54 55 aa3.71□□□□□ -1.82
LPCAT4-206ENST00000566581 KRTAP4-11Q9BYQ6 195 aa3.68□□□□□ -1.82
LPCAT4-206ENST00000566581 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
LPCAT4-206ENST00000566581 PMAIP1Q13794 54 aa3.56□□□□□ -1.84
LPCAT4-206ENST00000566581 OBSCNQ5VST9 7968 aa3.55□□□□□ -1.84
LPCAT4-206ENST00000566581 KRTAP5-8O75690 187 aa3.55□□□□□ -1.84
LPCAT4-206ENST00000566581 BRK1Q8WUW1 75 aa3.55□□□□□ -1.84
LPCAT4-206ENST00000566581 MT3P25713 68 aa3.52□□□□□ -1.85
LPCAT4-206ENST00000566581 KRTAP5-1Q6L8H4 278 aa3.36□□□□□ -1.87
LPCAT4-206ENST00000566581 KRTAP9-9Q9BYP9 154 aa3.36□□□□□ -1.87
LPCAT4-206ENST00000566581 MUC5BQ9HC84 5762 aaPredicted RBP3.35□□□□□ -1.87
LPCAT4-206ENST00000566581 MUC5ACP98088 5654 aa3.34□□□□□ -1.87
LPCAT4-206ENST00000566581 KTN1-AS1Q86SY8 53 aa3.33□□□□□ -1.88
LPCAT4-206ENST00000566581 AHNAKQ09666 5890 aaKnown RBP3.33□□□□□ -1.88
LPCAT4-206ENST00000566581 LCE1EQ5T753 118 aa3.25□□□□□ -1.89
LPCAT4-206ENST00000566581 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
LPCAT4-206ENST00000566581 PRAC1Q96KF2 57 aa3.2□□□□□ -1.9
LPCAT4-206ENST00000566581 LUZP6Q538Z0 58 aa3.05□□□□□ -1.92
LPCAT4-206ENST00000566581 KRTAP4-2Q9BYR5 136 aa3.05□□□□□ -1.92
LPCAT4-206ENST00000566581 LCE1CQ5T751 118 aa3.01□□□□□ -1.93
LPCAT4-206ENST00000566581 LCE1BQ5T7P3 118 aa3.01□□□□□ -1.93
LPCAT4-206ENST00000566581 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
LPCAT4-206ENST00000566581 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.75□□□□□ -1.97
LPCAT4-206ENST00000566581 LCE3EQ5T5B0 92 aa2.74□□□□□ -1.97
LPCAT4-206ENST00000566581 NDUFAF8A1L188 74 aa2.73□□□□□ -1.97
LPCAT4-206ENST00000566581 KRTAP5-11Q6L8G4 156 aa2.72□□□□□ -1.97
LPCAT4-206ENST00000566581 LCE1FQ5T754 118 aa2.66□□□□□ -1.98
LPCAT4-206ENST00000566581 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
LPCAT4-206ENST00000566581 INE1O15225 51 aa2.37□□□□□ -2.03
LPCAT4-206ENST00000566581 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
LPCAT4-206ENST00000566581 KRTAP4-4Q9BYR3 166 aa2.26□□□□□ -2.05
LPCAT4-206ENST00000566581 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
LPCAT4-206ENST00000566581 PRM1P04553 51 aa2.03□□□□□ -2.08
LPCAT4-206ENST00000566581 KRTAP21-1Q3LI58 79 aa1.78□□□□□ -2.12
LPCAT4-206ENST00000566581 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 13.2 ms