RNA–Protein interactions for RNA: ENST00000566292.5

USB1-213, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 575 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-213ENST00000566292 ANAPC13Q9BS18 74 aa6.28□□□□□ -1.4
USB1-213ENST00000566292 AHNAK2Q8IVF2 5795 aa6.24□□□□□ -1.41
USB1-213ENST00000566292 KRTAP4-6Q9BYQ5 205 aa6.23□□□□□ -1.41
USB1-213ENST00000566292 CCDC179H3BU77 68 aa6.21□□□□□ -1.42
USB1-213ENST00000566292 PRR15LQ9BU68 103 aa6.21□□□□□ -1.42
USB1-213ENST00000566292 KRTAP4-7Q9BYR0 210 aa6.21□□□□□ -1.42
USB1-213ENST00000566292 KRTAP12-3P60328 96 aa6.18□□□□□ -1.42
USB1-213ENST00000566292 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
USB1-213ENST00000566292 ATP5EP56381 51 aaPredicted RBP6.14□□□□□ -1.43
USB1-213ENST00000566292 KRTAP5-10Q6L8G5 202 aa6.14□□□□□ -1.43
USB1-213ENST00000566292 UQCR11O14957 56 aa6.02□□□□□ -1.45
USB1-213ENST00000566292 KRTAP5-5Q701N2 237 aaPredicted RBP6.01□□□□□ -1.45
USB1-213ENST00000566292 KRTAP20-2Q3LI61 65 aa5.98□□□□□ -1.45
USB1-213ENST00000566292 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
USB1-213ENST00000566292 KRTAP25-1Q3LHN0 102 aa5.93□□□□□ -1.46
USB1-213ENST00000566292 TMEM258P61165 79 aa5.92□□□□□ -1.46
USB1-213ENST00000566292 SPRR5A0A1B0GTR4 108 aa5.91□□□□□ -1.46
USB1-213ENST00000566292 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
USB1-213ENST00000566292 LOC100996750A0A140TA64 210 aa5.89□□□□□ -1.47
USB1-213ENST00000566292 MIR22HGQ0VDD5 57 aa5.88□□□□□ -1.47
USB1-213ENST00000566292 SYNE1Q8NF91 8797 aaKnown RBP5.86□□□□□ -1.47
USB1-213ENST00000566292 KRTAP12-4P60329 112 aa5.85□□□□□ -1.47
USB1-213ENST00000566292 KRTAP19-4Q3LI73 84 aa5.78□□□□□ -1.48
USB1-213ENST00000566292 K7ERS5 55 aa5.76□□□□□ -1.49
USB1-213ENST00000566292 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
USB1-213ENST00000566292 KRTAP23-1A1A580 65 aa5.7□□□□□ -1.5
USB1-213ENST00000566292 PSPHP1O15172 72 aa5.68□□□□□ -1.5
USB1-213ENST00000566292 LCE3CQ5T5A8 94 aa5.68□□□□□ -1.5
USB1-213ENST00000566292 PCP4P48539 62 aa5.63□□□□□ -1.51
USB1-213ENST00000566292 V9GYY9 64 aa5.62□□□□□ -1.51
USB1-213ENST00000566292 Q1T7F1 81 aa5.61□□□□□ -1.51
USB1-213ENST00000566292 MT1AP04731 61 aa5.53□□□□□ -1.52
USB1-213ENST00000566292 KRTAP6-1Q3LI64 71 aa5.53□□□□□ -1.52
USB1-213ENST00000566292 KRTAP5-2Q701N4 177 aa5.52□□□□□ -1.53
USB1-213ENST00000566292 KRTAP4-11Q9BYQ6 195 aa5.49□□□□□ -1.53
USB1-213ENST00000566292 A6NED7 52 aa5.45□□□□□ -1.54
USB1-213ENST00000566292 CDC42SE1Q9NRR8 79 aa5.45□□□□□ -1.54
USB1-213ENST00000566292 KRTAP9-6A8MVA2 160 aa5.41□□□□□ -1.54
USB1-213ENST00000566292 ROMO1P60602 79 aa5.37□□□□□ -1.55
USB1-213ENST00000566292 KRTAP9-4Q9BYQ2 154 aa5.36□□□□□ -1.55
USB1-213ENST00000566292 RPS28P62857 69 aaKnown RBP5.34□□□□□ -1.55
USB1-213ENST00000566292 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
USB1-213ENST00000566292 KRTAP6-2Q3LI66 62 aa5.3□□□□□ -1.56
USB1-213ENST00000566292 OBSCNQ5VST9 7968 aa5.22□□□□□ -1.57
USB1-213ENST00000566292 MUC5BQ9HC84 5762 aaPredicted RBP5.15□□□□□ -1.58
USB1-213ENST00000566292 MUC5ACP98088 5654 aa5.14□□□□□ -1.59
USB1-213ENST00000566292 AHNAKQ09666 5890 aaKnown RBP5.14□□□□□ -1.59
USB1-213ENST00000566292 MT3P25713 68 aa5.05□□□□□ -1.6
USB1-213ENST00000566292 KRTAP9-9Q9BYP9 154 aa5.04□□□□□ -1.6
USB1-213ENST00000566292 KRTAP5-1Q6L8H4 278 aa4.98□□□□□ -1.61
USB1-213ENST00000566292 LCE1EQ5T753 118 aa4.68□□□□□ -1.66
USB1-213ENST00000566292 BRK1Q8WUW1 75 aa4.68□□□□□ -1.66
USB1-213ENST00000566292 PRO0628Q9UI54 55 aa4.54□□□□□ -1.68
USB1-213ENST00000566292 PMAIP1Q13794 54 aa4.47□□□□□ -1.69
USB1-213ENST00000566292 KRTAP4-2Q9BYR5 136 aa4.47□□□□□ -1.69
USB1-213ENST00000566292 LCE1BQ5T7P3 118 aa4.43□□□□□ -1.7
USB1-213ENST00000566292 LCE1CQ5T751 118 aa4.35□□□□□ -1.71
USB1-213ENST00000566292 KTN1-AS1Q86SY8 53 aa4.22□□□□□ -1.73
USB1-213ENST00000566292 PRAC1Q96KF2 57 aa4.11□□□□□ -1.75
USB1-213ENST00000566292 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
USB1-213ENST00000566292 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
USB1-213ENST00000566292 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
USB1-213ENST00000566292 KRTAP5-11Q6L8G4 156 aa3.96□□□□□ -1.78
USB1-213ENST00000566292 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.94□□□□□ -1.78
USB1-213ENST00000566292 LCE1FQ5T754 118 aa3.87□□□□□ -1.79
USB1-213ENST00000566292 LCE3EQ5T5B0 92 aa3.78□□□□□ -1.8
USB1-213ENST00000566292 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
USB1-213ENST00000566292 PHGR1C9JFL3 82 aa3.57□□□□□ -1.84
USB1-213ENST00000566292 LUZP6Q538Z0 58 aa3.54□□□□□ -1.84
USB1-213ENST00000566292 KRTAP4-4Q9BYR3 166 aa3.37□□□□□ -1.87
USB1-213ENST00000566292 MUC19Q7Z5P9 8384 aa3.24□□□□□ -1.89
USB1-213ENST00000566292 NDUFAF8A1L188 74 aa3.23□□□□□ -1.89
USB1-213ENST00000566292 A0A0A0MQY5 61 aa2.94□□□□□ -1.94
USB1-213ENST00000566292 INE1O15225 51 aa2.77□□□□□ -1.97
USB1-213ENST00000566292 PRM1P04553 51 aa2.75□□□□□ -1.97
USB1-213ENST00000566292 KRTAP21-1Q3LI58 79 aa2.7□□□□□ -1.98
USB1-213ENST00000566292 H3BS24 57 aa2.59□□□□□ -1.99
USB1-213ENST00000566292 MUC16Q8WXI7 14507 aa2.37□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 80.3 ms