RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 KRTAP13-4Q3LI77 160 aa1.45□□□□□ -2.18
CNEP1R1-207ENST00000566093 S4R3F8 94 aa1.45□□□□□ -2.18
CNEP1R1-207ENST00000566093 LRP2P98164 4655 aa1.44□□□□□ -2.18
CNEP1R1-207ENST00000566093 MUC2Q02817 5179 aa1.44□□□□□ -2.18
CNEP1R1-207ENST00000566093 A0A0D9SG42 100 aa1.44□□□□□ -2.18
CNEP1R1-207ENST00000566093 KRTAP12-3P60328 96 aa1.43□□□□□ -2.18
CNEP1R1-207ENST00000566093 PLAC4Q8WY50 150 aa1.43□□□□□ -2.18
CNEP1R1-207ENST00000566093 PRO2289Q9P1D8 64 aa1.42□□□□□ -2.18
CNEP1R1-207ENST00000566093 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
CNEP1R1-207ENST00000566093 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
CNEP1R1-207ENST00000566093 CRCT1Q9UGL9 99 aa1.41□□□□□ -2.18
CNEP1R1-207ENST00000566093 KRTAP12-1P59990 96 aa1.4□□□□□ -2.19
CNEP1R1-207ENST00000566093 KRTAP12-4P60329 112 aa1.4□□□□□ -2.19
CNEP1R1-207ENST00000566093 KRTAP6-3Q3LI67 103 aa1.4□□□□□ -2.19
CNEP1R1-207ENST00000566093 RNF213Q63HN8 5207 aa1.39□□□□□ -2.19
CNEP1R1-207ENST00000566093 LPAP08519 4548 aa1.39□□□□□ -2.19
CNEP1R1-207ENST00000566093 FCGBPQ9Y6R7 5405 aaPredicted RBP1.38□□□□□ -2.19
CNEP1R1-207ENST00000566093 INE1O15225 51 aa1.35□□□□□ -2.19
CNEP1R1-207ENST00000566093 MUC17Q685J3 4493 aa1.35□□□□□ -2.19
CNEP1R1-207ENST00000566093 FAT4Q6V0I7 4981 aa1.34□□□□□ -2.19
CNEP1R1-207ENST00000566093 R4GN34 69 aa1.34□□□□□ -2.19
CNEP1R1-207ENST00000566093 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.2
CNEP1R1-207ENST00000566093 C9orf92A6NGG3 77 aa1.32□□□□□ -2.2
CNEP1R1-207ENST00000566093 M0QZ58 72 aa1.32□□□□□ -2.2
CNEP1R1-207ENST00000566093 KRTAP19-2Q3LHN2 52 aa1.31□□□□□ -2.2
CNEP1R1-207ENST00000566093 MT1HP80294 61 aa1.23□□□□□ -2.21
CNEP1R1-207ENST00000566093 TNP1P09430 55 aa1.19□□□□□ -2.22
CNEP1R1-207ENST00000566093 USH2AO75445 5202 aa1.16□□□□□ -2.22
CNEP1R1-207ENST00000566093 MT2AP02795 61 aa1.16□□□□□ -2.22
CNEP1R1-207ENST00000566093 SPRR2GQ9BYE4 73 aa1.16□□□□□ -2.22
CNEP1R1-207ENST00000566093 MT1FP04733 61 aa1.15□□□□□ -2.23
CNEP1R1-207ENST00000566093 FSIP2Q5CZC0 6907 aa1.14□□□□□ -2.23
CNEP1R1-207ENST00000566093 M0R2T5 61 aa1.14□□□□□ -2.23
CNEP1R1-207ENST00000566093 KRTAP19-8Q3LI54 63 aa1.13□□□□□ -2.23
CNEP1R1-207ENST00000566093 SSPOA2VEC9 5147 aa1.12□□□□□ -2.23
CNEP1R1-207ENST00000566093 KRTAP19-6Q3LI70 58 aa1.1□□□□□ -2.23
CNEP1R1-207ENST00000566093 MT1BP07438 61 aa1.09□□□□□ -2.23
CNEP1R1-207ENST00000566093 KRTAP8-1Q8IUC2 63 aa1.08□□□□□ -2.24
CNEP1R1-207ENST00000566093 MT1XP80297 61 aa1.05□□□□□ -2.24
CNEP1R1-207ENST00000566093 KRTAP2-3P0C7H8 128 aa1.03□□□□□ -2.24
CNEP1R1-207ENST00000566093 KRTAP2-4Q9BYR9 128 aa1.03□□□□□ -2.24
CNEP1R1-207ENST00000566093 KRTAP2-1Q9BYU5 128 aa1.03□□□□□ -2.24
CNEP1R1-207ENST00000566093 KMT2DO14686 5537 aa1.03□□□□□ -2.25
CNEP1R1-207ENST00000566093 MACF1Q9UPN3 7388 aaKnown RBP1.02□□□□□ -2.25
CNEP1R1-207ENST00000566093 MDN1Q9NU22 5596 aa1.02□□□□□ -2.25
CNEP1R1-207ENST00000566093 MUC12Q9UKN1 5478 aa1□□□□□ -2.25
CNEP1R1-207ENST00000566093 SYNE2Q8WXH0 6885 aaKnown RBP0.98□□□□□ -2.25
CNEP1R1-207ENST00000566093 KRTAP19-5Q3LI72 72 aa0.95□□□□□ -2.26
CNEP1R1-207ENST00000566093 KRTAP19-7Q3SYF9 63 aa0.94□□□□□ -2.26
CNEP1R1-207ENST00000566093 MT1EP04732 61 aa0.92□□□□□ -2.26
CNEP1R1-207ENST00000566093 MT1GP13640 62 aa0.91□□□□□ -2.26
CNEP1R1-207ENST00000566093 NEBP20929 6669 aa0.91□□□□□ -2.26
CNEP1R1-207ENST00000566093 KRTAP19-3Q7Z4W3 81 aa0.9□□□□□ -2.27
CNEP1R1-207ENST00000566093 SPRR2FQ96RM1 72 aa0.9□□□□□ -2.27
CNEP1R1-207ENST00000566093 DSTQ03001 7570 aaKnown RBP0.9□□□□□ -2.27
CNEP1R1-207ENST00000566093 MT1LQ93083 61 aa0.89□□□□□ -2.27
CNEP1R1-207ENST00000566093 PRM1P04553 51 aa0.87□□□□□ -2.27
CNEP1R1-207ENST00000566093 SPRR2EP22531 72 aa0.86□□□□□ -2.27
CNEP1R1-207ENST00000566093 SPRR2BP35325 72 aa0.86□□□□□ -2.27
CNEP1R1-207ENST00000566093 SPRR2AP35326 72 aa0.86□□□□□ -2.27
CNEP1R1-207ENST00000566093 MT1MQ8N339 61 aa0.85□□□□□ -2.27
CNEP1R1-207ENST00000566093 SPRR2DP22532 72 aa0.83□□□□□ -2.28
CNEP1R1-207ENST00000566093 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
CNEP1R1-207ENST00000566093 MT1AP04731 61 aa0.81□□□□□ -2.28
CNEP1R1-207ENST00000566093 SYNE1Q8NF91 8797 aaKnown RBP0.79□□□□□ -2.28
CNEP1R1-207ENST00000566093 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
CNEP1R1-207ENST00000566093 KRTAP5-10Q6L8G5 202 aa0.79□□□□□ -2.28
CNEP1R1-207ENST00000566093 AHNAK2Q8IVF2 5795 aa0.78□□□□□ -2.28
CNEP1R1-207ENST00000566093 KRTAP6-2Q3LI66 62 aa0.78□□□□□ -2.28
CNEP1R1-207ENST00000566093 KRTAP20-2Q3LI61 65 aa0.73□□□□□ -2.29
CNEP1R1-207ENST00000566093 KRTAP6-1Q3LI64 71 aa0.73□□□□□ -2.29
CNEP1R1-207ENST00000566093 GPR98Q8WXG9 6306 aa0.7□□□□□ -2.3
CNEP1R1-207ENST00000566093 MT4P47944 62 aa0.7□□□□□ -2.3
CNEP1R1-207ENST00000566093 MUC5ACP98088 5654 aa0.63□□□□□ -2.31
CNEP1R1-207ENST00000566093 MUC5BQ9HC84 5762 aaPredicted RBP0.62□□□□□ -2.31
CNEP1R1-207ENST00000566093 KRTAP21-1Q3LI58 79 aa0.58□□□□□ -2.32
CNEP1R1-207ENST00000566093 AHNAKQ09666 5890 aaKnown RBP0.56□□□□□ -2.32
CNEP1R1-207ENST00000566093 PHGR1C9JFL3 82 aa0.47□□□□□ -2.33
Retrieved 78 of 20,778 RNA–protein pairs in 73.1 ms