RNA–Protein interactions for RNA: ENST00000565684.5

KIFC3-223, Transcript of kinesin family member C3, human

TSL 5

Gene KIFC3, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-223	ENST00000565684	LINC01558	Q9Y6Z2	57 aa		7.97	□□□□□ -1.13
KIFC3-223	ENST00000565684	LCE1D	Q5T752	114 aa		7.9	□□□□□ -1.14
KIFC3-223	ENST00000565684	KRTAP4-3	Q9BYR4	195 aa		7.9	□□□□□ -1.14
KIFC3-223	ENST00000565684		V9GYY9	64 aa		7.86	□□□□□ -1.15
KIFC3-223	ENST00000565684	HMCN1	Q96RW7	5635 aa		7.85	□□□□□ -1.15
KIFC3-223	ENST00000565684	LCE4A	Q5TA78	99 aa		7.83	□□□□□ -1.16
KIFC3-223	ENST00000565684	MT4	P47944	62 aa		7.77	□□□□□ -1.17
KIFC3-223	ENST00000565684	UQCR11	O14957	56 aa		7.76	□□□□□ -1.17
KIFC3-223	ENST00000565684	RPS28	P62857	69 aa	Known RBP	7.74	□□□□□ -1.17
KIFC3-223	ENST00000565684	KRTAP5-4	Q6L8H1	288 aa		7.74	□□□□□ -1.17
KIFC3-223	ENST00000565684	KRTAP12-3	P60328	96 aa		7.73	□□□□□ -1.17
KIFC3-223	ENST00000565684		Q1T7F1	81 aa		7.72	□□□□□ -1.17
KIFC3-223	ENST00000565684	KRTAP4-7	Q9BYR0	210 aa		7.7	□□□□□ -1.18
KIFC3-223	ENST00000565684	PSPHP1	O15172	72 aa		7.62	□□□□□ -1.19
KIFC3-223	ENST00000565684	AHNAK2	Q8IVF2	5795 aa		7.6	□□□□□ -1.19
KIFC3-223	ENST00000565684	MIR22HG	Q0VDD5	57 aa		7.59	□□□□□ -1.19
KIFC3-223	ENST00000565684	KRTAP4-6	Q9BYQ5	205 aa		7.58	□□□□□ -1.2
KIFC3-223	ENST00000565684	KRTAP25-1	Q3LHN0	102 aa		7.54	□□□□□ -1.2
KIFC3-223	ENST00000565684		A6NED7	52 aa		7.46	□□□□□ -1.22
KIFC3-223	ENST00000565684		K7ERS5	55 aa		7.46	□□□□□ -1.22
KIFC3-223	ENST00000565684	KRTAP5-5	Q701N2	237 aa	Predicted RBP	7.43	□□□□□ -1.22
KIFC3-223	ENST00000565684	KRTAP5-10	Q6L8G5	202 aa		7.37	□□□□□ -1.23
KIFC3-223	ENST00000565684	LOC100996750	A0A140TA64	210 aa		7.29	□□□□□ -1.24
KIFC3-223	ENST00000565684	KRTAP20-2	Q3LI61	65 aa		7.29	□□□□□ -1.24
KIFC3-223	ENST00000565684	SVIP	Q8NHG7	77 aa		7.27	□□□□□ -1.25
KIFC3-223	ENST00000565684	KRTAP23-1	A1A580	65 aa		7.25	□□□□□ -1.25
KIFC3-223	ENST00000565684	KRTAP19-4	Q3LI73	84 aa		7.23	□□□□□ -1.25
KIFC3-223	ENST00000565684	SPRR5	A0A1B0GTR4	108 aa		7.22	□□□□□ -1.25
KIFC3-223	ENST00000565684	KRTAP15-1	Q3LI76	137 aa		7.19	□□□□□ -1.26
KIFC3-223	ENST00000565684	CDC42SE1	Q9NRR8	79 aa		7.19	□□□□□ -1.26
KIFC3-223	ENST00000565684	KRTAP5-3	Q6L8H2	238 aa		7.18	□□□□□ -1.26
KIFC3-223	ENST00000565684	SYNE1	Q8NF91	8797 aa	Known RBP	7.15	□□□□□ -1.26
KIFC3-223	ENST00000565684	KRTAP12-4	P60329	112 aa		7.14	□□□□□ -1.27
KIFC3-223	ENST00000565684	LCE3C	Q5T5A8	94 aa		7.12	□□□□□ -1.27
KIFC3-223	ENST00000565684	KRTAP5-7	Q6L8G8	165 aa		7.07	□□□□□ -1.28
KIFC3-223	ENST00000565684	ROMO1	P60602	79 aa		6.94	□□□□□ -1.3
KIFC3-223	ENST00000565684	BRK1	Q8WUW1	75 aa		6.9	□□□□□ -1.3
KIFC3-223	ENST00000565684	MT1A	P04731	61 aa		6.85	□□□□□ -1.31
KIFC3-223	ENST00000565684	KRTAP6-1	Q3LI64	71 aa		6.84	□□□□□ -1.31
KIFC3-223	ENST00000565684	KRTAP9-6	A8MVA2	160 aa		6.79	□□□□□ -1.32
KIFC3-223	ENST00000565684	KRTAP5-2	Q701N4	177 aa		6.78	□□□□□ -1.32
KIFC3-223	ENST00000565684	KRTAP4-11	Q9BYQ6	195 aa		6.65	□□□□□ -1.34
KIFC3-223	ENST00000565684	KRTAP9-4	Q9BYQ2	154 aa		6.62	□□□□□ -1.35
KIFC3-223	ENST00000565684	KRTAP6-2	Q3LI66	62 aa		6.53	□□□□□ -1.36
KIFC3-223	ENST00000565684	PMAIP1	Q13794	54 aa		6.52	□□□□□ -1.37
KIFC3-223	ENST00000565684	OBSCN	Q5VST9	7968 aa		6.48	□□□□□ -1.37
KIFC3-223	ENST00000565684	KRTAP5-8	O75690	187 aa		6.46	□□□□□ -1.38
KIFC3-223	ENST00000565684	PRO0628	Q9UI54	55 aa		6.43	□□□□□ -1.38
KIFC3-223	ENST00000565684	MUC5B	Q9HC84	5762 aa	Predicted RBP	6.24	□□□□□ -1.41
KIFC3-223	ENST00000565684	MT3	P25713	68 aa		6.24	□□□□□ -1.41
KIFC3-223	ENST00000565684	AHNAK	Q09666	5890 aa	Known RBP	6.24	□□□□□ -1.41
KIFC3-223	ENST00000565684	MUC5AC	P98088	5654 aa		6.23	□□□□□ -1.41
KIFC3-223	ENST00000565684	KRTAP5-1	Q6L8H4	278 aa		6.09	□□□□□ -1.43
KIFC3-223	ENST00000565684	PRAC1	Q96KF2	57 aa		6.07	□□□□□ -1.44
KIFC3-223	ENST00000565684	KRTAP9-9	Q9BYP9	154 aa		6.06	□□□□□ -1.44
KIFC3-223	ENST00000565684	KTN1-AS1	Q86SY8	53 aa		6.05	□□□□□ -1.44
KIFC3-223	ENST00000565684	LCE1E	Q5T753	118 aa		5.76	□□□□□ -1.49
KIFC3-223	ENST00000565684	KRTAP4-2	Q9BYR5	136 aa		5.5	□□□□□ -1.53
KIFC3-223	ENST00000565684	LCE1B	Q5T7P3	118 aa		5.41	□□□□□ -1.54
KIFC3-223	ENST00000565684	LCE1C	Q5T751	118 aa		5.36	□□□□□ -1.55
KIFC3-223	ENST00000565684	LUZP6	Q538Z0	58 aa		5.24	□□□□□ -1.57
KIFC3-223	ENST00000565684	LCE3D	Q9BYE3	92 aa		5.1	□□□□□ -1.59
KIFC3-223	ENST00000565684		H3BS24	57 aa		5.08	□□□□□ -1.6
KIFC3-223	ENST00000565684		A0A0A0MQY5	61 aa		5.05	□□□□□ -1.6
KIFC3-223	ENST00000565684	KRTAP4-12	Q9BQ66	201 aa		4.97	□□□□□ -1.61
KIFC3-223	ENST00000565684	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	4.89	□□□□□ -1.63
KIFC3-223	ENST00000565684	KRTAP5-11	Q6L8G4	156 aa		4.87	□□□□□ -1.63
KIFC3-223	ENST00000565684	LCE3E	Q5T5B0	92 aa		4.78	□□□□□ -1.64
KIFC3-223	ENST00000565684	LCE1F	Q5T754	118 aa		4.71	□□□□□ -1.66
KIFC3-223	ENST00000565684	NDUFAF8	A1L188	74 aa		4.54	□□□□□ -1.68
KIFC3-223	ENST00000565684	KRTAP21-2	Q3LI59	83 aa		4.52	□□□□□ -1.69
KIFC3-223	ENST00000565684	PHGR1	C9JFL3	82 aa		4.26	□□□□□ -1.73
KIFC3-223	ENST00000565684	KRTAP4-4	Q9BYR3	166 aa		4.13	□□□□□ -1.75
KIFC3-223	ENST00000565684	MUC19	Q7Z5P9	8384 aa		3.97	□□□□□ -1.77
KIFC3-223	ENST00000565684	INE1	O15225	51 aa		3.81	□□□□□ -1.8
KIFC3-223	ENST00000565684	PRM1	P04553	51 aa		3.56	□□□□□ -1.84
KIFC3-223	ENST00000565684	KRTAP21-1	Q3LI58	79 aa		3.22	□□□□□ -1.89
KIFC3-223	ENST00000565684	MUC16	Q8WXI7	14507 aa		2.76	□□□□□ -1.97

Retrieved 78 of 20,778 RNA–protein pairs in 38 ms