RNA–Protein interactions for RNA: ENST00000565471.6

CLN6-206, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2 BASIC

Gene CLN6, Length 1,075 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-206ENST00000565471 MT4P47944 62 aa6.89□□□□□ -1.31
CLN6-206ENST00000565471 KRTAP4-3Q9BYR4 195 aa6.87□□□□□ -1.31
CLN6-206ENST00000565471 TMEM258P61165 79 aa6.85□□□□□ -1.31
CLN6-206ENST00000565471 KRTAP5-4Q6L8H1 288 aa6.84□□□□□ -1.31
CLN6-206ENST00000565471 LINC01558Q9Y6Z2 57 aa6.84□□□□□ -1.31
CLN6-206ENST00000565471 HMCN1Q96RW7 5635 aa6.77□□□□□ -1.33
CLN6-206ENST00000565471 KRTAP12-3P60328 96 aa6.75□□□□□ -1.33
CLN6-206ENST00000565471 UQCR11O14957 56 aa6.71□□□□□ -1.34
CLN6-206ENST00000565471 KRTAP4-6Q9BYQ5 205 aa6.69□□□□□ -1.34
CLN6-206ENST00000565471 KRTAP4-7Q9BYR0 210 aa6.68□□□□□ -1.34
CLN6-206ENST00000565471 RPS28P62857 69 aaKnown RBP6.6□□□□□ -1.35
CLN6-206ENST00000565471 KRTAP5-10Q6L8G5 202 aa6.58□□□□□ -1.36
CLN6-206ENST00000565471 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
CLN6-206ENST00000565471 AHNAK2Q8IVF2 5795 aa6.55□□□□□ -1.36
CLN6-206ENST00000565471 MIR22HGQ0VDD5 57 aa6.53□□□□□ -1.36
CLN6-206ENST00000565471 KRTAP5-5Q701N2 237 aaPredicted RBP6.51□□□□□ -1.37
CLN6-206ENST00000565471 K7ERS5 55 aa6.45□□□□□ -1.38
CLN6-206ENST00000565471 KRTAP20-2Q3LI61 65 aa6.45□□□□□ -1.38
CLN6-206ENST00000565471 KRTAP19-4Q3LI73 84 aa6.43□□□□□ -1.38
CLN6-206ENST00000565471 SPRR5A0A1B0GTR4 108 aa6.42□□□□□ -1.38
CLN6-206ENST00000565471 V9GYY9 64 aa6.41□□□□□ -1.38
CLN6-206ENST00000565471 KRTAP5-3Q6L8H2 238 aa6.4□□□□□ -1.38
CLN6-206ENST00000565471 KRTAP12-4P60329 112 aa6.37□□□□□ -1.39
CLN6-206ENST00000565471 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
CLN6-206ENST00000565471 KRTAP23-1A1A580 65 aa6.34□□□□□ -1.39
CLN6-206ENST00000565471 LOC100996750A0A140TA64 210 aa6.33□□□□□ -1.4
CLN6-206ENST00000565471 Q1T7F1 81 aa6.32□□□□□ -1.4
CLN6-206ENST00000565471 PSPHP1O15172 72 aa6.3□□□□□ -1.4
CLN6-206ENST00000565471 KRTAP15-1Q3LI76 137 aa6.27□□□□□ -1.41
CLN6-206ENST00000565471 SYNE1Q8NF91 8797 aaKnown RBP6.23□□□□□ -1.41
CLN6-206ENST00000565471 LCE3CQ5T5A8 94 aa6.21□□□□□ -1.42
CLN6-206ENST00000565471 A6NED7 52 aa6.09□□□□□ -1.43
CLN6-206ENST00000565471 CDC42SE1Q9NRR8 79 aa6.08□□□□□ -1.44
CLN6-206ENST00000565471 MT1AP04731 61 aa6.03□□□□□ -1.44
CLN6-206ENST00000565471 KRTAP5-2Q701N4 177 aa5.98□□□□□ -1.45
CLN6-206ENST00000565471 ROMO1P60602 79 aa5.97□□□□□ -1.45
CLN6-206ENST00000565471 KRTAP6-1Q3LI64 71 aa5.97□□□□□ -1.45
CLN6-206ENST00000565471 KRTAP4-11Q9BYQ6 195 aa5.92□□□□□ -1.46
CLN6-206ENST00000565471 BRK1Q8WUW1 75 aa5.86□□□□□ -1.47
CLN6-206ENST00000565471 KRTAP9-6A8MVA2 160 aa5.85□□□□□ -1.47
CLN6-206ENST00000565471 KRTAP9-4Q9BYQ2 154 aa5.83□□□□□ -1.48
CLN6-206ENST00000565471 PRO0628Q9UI54 55 aa5.77□□□□□ -1.49
CLN6-206ENST00000565471 KRTAP5-8O75690 187 aa5.73□□□□□ -1.49
CLN6-206ENST00000565471 KRTAP6-2Q3LI66 62 aa5.73□□□□□ -1.49
CLN6-206ENST00000565471 PMAIP1Q13794 54 aa5.56□□□□□ -1.52
CLN6-206ENST00000565471 MT3P25713 68 aa5.51□□□□□ -1.53
CLN6-206ENST00000565471 OBSCNQ5VST9 7968 aa5.49□□□□□ -1.53
CLN6-206ENST00000565471 KRTAP9-9Q9BYP9 154 aa5.45□□□□□ -1.54
CLN6-206ENST00000565471 MUC5ACP98088 5654 aa5.43□□□□□ -1.54
CLN6-206ENST00000565471 MUC5BQ9HC84 5762 aaPredicted RBP5.37□□□□□ -1.55
CLN6-206ENST00000565471 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
CLN6-206ENST00000565471 AHNAKQ09666 5890 aaKnown RBP5.37□□□□□ -1.55
CLN6-206ENST00000565471 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
CLN6-206ENST00000565471 LCE1EQ5T753 118 aa5.11□□□□□ -1.59
CLN6-206ENST00000565471 SVIPQ8NHG7 77 aa5.11□□□□□ -1.59
CLN6-206ENST00000565471 PRAC1Q96KF2 57 aa5.07□□□□□ -1.6
CLN6-206ENST00000565471 KRTAP4-2Q9BYR5 136 aa4.83□□□□□ -1.64
CLN6-206ENST00000565471 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
CLN6-206ENST00000565471 LCE1CQ5T751 118 aa4.74□□□□□ -1.65
CLN6-206ENST00000565471 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
CLN6-206ENST00000565471 LUZP6Q538Z0 58 aa4.38□□□□□ -1.71
CLN6-206ENST00000565471 KRTAP4-12Q9BQ66 201 aa4.38□□□□□ -1.71
CLN6-206ENST00000565471 H3BS24 57 aa4.32□□□□□ -1.72
CLN6-206ENST00000565471 KRTAP5-11Q6L8G4 156 aa4.32□□□□□ -1.72
CLN6-206ENST00000565471 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.31□□□□□ -1.72
CLN6-206ENST00000565471 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
CLN6-206ENST00000565471 LCE3EQ5T5B0 92 aa4.16□□□□□ -1.74
CLN6-206ENST00000565471 NDUFAF8A1L188 74 aa4.06□□□□□ -1.76
CLN6-206ENST00000565471 KRTAP21-2Q3LI59 83 aa3.95□□□□□ -1.78
CLN6-206ENST00000565471 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
CLN6-206ENST00000565471 A0A0A0MQY5 61 aa3.72□□□□□ -1.81
CLN6-206ENST00000565471 KRTAP4-4Q9BYR3 166 aa3.6□□□□□ -1.83
CLN6-206ENST00000565471 INE1O15225 51 aa3.52□□□□□ -1.85
CLN6-206ENST00000565471 MUC19Q7Z5P9 8384 aa3.4□□□□□ -1.87
CLN6-206ENST00000565471 PRM1P04553 51 aa3.03□□□□□ -1.92
CLN6-206ENST00000565471 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
CLN6-206ENST00000565471 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms