RNA–Protein interactions for RNA: ENST00000564770.1

CDH11-210, Transcript of cadherin 11, humanhuman

TSL 3

Gene CDH11, Length 425 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-210ENST00000564770 SEC61GP60059 68 aa5.48□□□□□ -1.53
CDH11-210ENST00000564770 A0A1B0GU33 70 aa5.46□□□□□ -1.54
CDH11-210ENST00000564770 KRTAP5-7Q6L8G8 165 aa5.4□□□□□ -1.54
CDH11-210ENST00000564770 KRTAP5-3Q6L8H2 238 aa5.39□□□□□ -1.55
CDH11-210ENST00000564770 KRTAP4-7Q9BYR0 210 aa5.39□□□□□ -1.55
CDH11-210ENST00000564770 TMEM258P61165 79 aa5.37□□□□□ -1.55
CDH11-210ENST00000564770 A8MU10 97 aa5.36□□□□□ -1.55
CDH11-210ENST00000564770 A0A1B0GU69 56 aa5.32□□□□□ -1.56
CDH11-210ENST00000564770 TNP1P09430 55 aa5.32□□□□□ -1.56
CDH11-210ENST00000564770 KRTAP20-2Q3LI61 65 aa5.32□□□□□ -1.56
CDH11-210ENST00000564770 SMIM26A0A096LP01 95 aa5.29□□□□□ -1.56
CDH11-210ENST00000564770 KRTAP5-5Q701N2 237 aaPredicted RBP5.28□□□□□ -1.56
CDH11-210ENST00000564770 LINC01558Q9Y6Z2 57 aa5.27□□□□□ -1.57
CDH11-210ENST00000564770 KRTAP12-3P60328 96 aa5.24□□□□□ -1.57
CDH11-210ENST00000564770 PRR15LQ9BU68 103 aa5.23□□□□□ -1.57
CDH11-210ENST00000564770 SPRR5A0A1B0GTR4 108 aa5.21□□□□□ -1.58
CDH11-210ENST00000564770 SYNE1Q8NF91 8797 aaKnown RBP5.16□□□□□ -1.58
CDH11-210ENST00000564770 LOC100996750A0A140TA64 210 aa5.12□□□□□ -1.59
CDH11-210ENST00000564770 KRTAP12-4P60329 112 aa5.12□□□□□ -1.59
CDH11-210ENST00000564770 UQCR11O14957 56 aa5.08□□□□□ -1.6
CDH11-210ENST00000564770 V9GYY9 64 aa5.05□□□□□ -1.6
CDH11-210ENST00000564770 Q1T7F1 81 aa5.03□□□□□ -1.6
CDH11-210ENST00000564770 MIR22HGQ0VDD5 57 aa4.95□□□□□ -1.62
CDH11-210ENST00000564770 RPS28P62857 69 aaKnown RBP4.93□□□□□ -1.62
CDH11-210ENST00000564770 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
CDH11-210ENST00000564770 PCP4P48539 62 aa4.89□□□□□ -1.63
CDH11-210ENST00000564770 PSPHP1O15172 72 aa4.88□□□□□ -1.63
CDH11-210ENST00000564770 KRTAP25-1Q3LHN0 102 aa4.87□□□□□ -1.63
CDH11-210ENST00000564770 KRTAP5-2Q701N4 177 aa4.87□□□□□ -1.63
CDH11-210ENST00000564770 KRTAP19-4Q3LI73 84 aa4.82□□□□□ -1.64
CDH11-210ENST00000564770 K7ERS5 55 aa4.81□□□□□ -1.64
CDH11-210ENST00000564770 KRTAP6-1Q3LI64 71 aa4.81□□□□□ -1.64
CDH11-210ENST00000564770 LCE3CQ5T5A8 94 aa4.79□□□□□ -1.64
CDH11-210ENST00000564770 KRTAP5-8O75690 187 aa4.78□□□□□ -1.64
CDH11-210ENST00000564770 MT1AP04731 61 aa4.78□□□□□ -1.64
CDH11-210ENST00000564770 KRTAP15-1Q3LI76 137 aa4.77□□□□□ -1.65
CDH11-210ENST00000564770 MUC5ACP98088 5654 aa4.75□□□□□ -1.65
CDH11-210ENST00000564770 A6NED7 52 aa4.74□□□□□ -1.65
CDH11-210ENST00000564770 MUC5BQ9HC84 5762 aaPredicted RBP4.73□□□□□ -1.65
CDH11-210ENST00000564770 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
CDH11-210ENST00000564770 KRTAP23-1A1A580 65 aa4.71□□□□□ -1.66
CDH11-210ENST00000564770 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
CDH11-210ENST00000564770 KRTAP9-4Q9BYQ2 154 aa4.64□□□□□ -1.67
CDH11-210ENST00000564770 CDC42SE1Q9NRR8 79 aa4.64□□□□□ -1.67
CDH11-210ENST00000564770 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
CDH11-210ENST00000564770 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
CDH11-210ENST00000564770 ROMO1P60602 79 aa4.54□□□□□ -1.68
CDH11-210ENST00000564770 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
CDH11-210ENST00000564770 KRTAP5-1Q6L8H4 278 aa4.43□□□□□ -1.7
CDH11-210ENST00000564770 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
CDH11-210ENST00000564770 MT3P25713 68 aa4.35□□□□□ -1.71
CDH11-210ENST00000564770 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
CDH11-210ENST00000564770 LCE1EQ5T753 118 aa4.06□□□□□ -1.76
CDH11-210ENST00000564770 PMAIP1Q13794 54 aa3.98□□□□□ -1.77
CDH11-210ENST00000564770 KRTAP4-2Q9BYR5 136 aa3.97□□□□□ -1.77
CDH11-210ENST00000564770 LCE1BQ5T7P3 118 aa3.88□□□□□ -1.79
CDH11-210ENST00000564770 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
CDH11-210ENST00000564770 LCE1CQ5T751 118 aa3.79□□□□□ -1.8
CDH11-210ENST00000564770 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
CDH11-210ENST00000564770 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
CDH11-210ENST00000564770 KRTAP5-11Q6L8G4 156 aa3.49□□□□□ -1.85
CDH11-210ENST00000564770 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.43□□□□□ -1.86
CDH11-210ENST00000564770 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
CDH11-210ENST00000564770 SVIPQ8NHG7 77 aa3.37□□□□□ -1.87
CDH11-210ENST00000564770 LCE3DQ9BYE3 92 aa3.37□□□□□ -1.87
CDH11-210ENST00000564770 PHGR1C9JFL3 82 aa3.26□□□□□ -1.89
CDH11-210ENST00000564770 LUZP6Q538Z0 58 aa3.19□□□□□ -1.9
CDH11-210ENST00000564770 KRTAP21-2Q3LI59 83 aa3.17□□□□□ -1.9
CDH11-210ENST00000564770 LCE3EQ5T5B0 92 aa3.11□□□□□ -1.91
CDH11-210ENST00000564770 H3BS24 57 aa2.98□□□□□ -1.93
CDH11-210ENST00000564770 KRTAP4-4Q9BYR3 166 aa2.96□□□□□ -1.94
CDH11-210ENST00000564770 MUC19Q7Z5P9 8384 aa2.93□□□□□ -1.94
CDH11-210ENST00000564770 NDUFAF8A1L188 74 aa2.64□□□□□ -1.99
CDH11-210ENST00000564770 KRTAP21-1Q3LI58 79 aa2.45□□□□□ -2.02
CDH11-210ENST00000564770 PRM1P04553 51 aa2.29□□□□□ -2.04
CDH11-210ENST00000564770 INE1O15225 51 aa2.24□□□□□ -2.05
CDH11-210ENST00000564770 A0A0A0MQY5 61 aa2.17□□□□□ -2.06
CDH11-210ENST00000564770 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 78 of 20,778 RNA–protein pairs in 90 ms