RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 SERP2Q8N6R1 65 aa4.75□□□□□ -1.65
CDR2-204ENST00000564542 TNP1P09430 55 aa4.74□□□□□ -1.65
CDR2-204ENST00000564542 KRTAP20-2Q3LI61 65 aa4.73□□□□□ -1.65
CDR2-204ENST00000564542 KRTAP23-1A1A580 65 aa4.72□□□□□ -1.65
CDR2-204ENST00000564542 K7ERU9 68 aa4.72□□□□□ -1.65
CDR2-204ENST00000564542 SMIM26A0A096LP01 95 aa4.71□□□□□ -1.66
CDR2-204ENST00000564542 KRTAP4-7Q9BYR0 210 aa4.71□□□□□ -1.66
CDR2-204ENST00000564542 SPRR5A0A1B0GTR4 108 aa4.68□□□□□ -1.66
CDR2-204ENST00000564542 KRTAP5-5Q701N2 237 aaPredicted RBP4.67□□□□□ -1.66
CDR2-204ENST00000564542 A8MU10 97 aa4.66□□□□□ -1.66
CDR2-204ENST00000564542 KRTAP12-3P60328 96 aa4.64□□□□□ -1.67
CDR2-204ENST00000564542 A0A1B0GU69 56 aa4.61□□□□□ -1.67
CDR2-204ENST00000564542 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
CDR2-204ENST00000564542 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
CDR2-204ENST00000564542 H7BZZ5 65 aa4.53□□□□□ -1.68
CDR2-204ENST00000564542 A0A0A0MQY5 61 aa4.52□□□□□ -1.69
CDR2-204ENST00000564542 COX7CP15954 63 aa4.5□□□□□ -1.69
CDR2-204ENST00000564542 SYNE1Q8NF91 8797 aaKnown RBP4.49□□□□□ -1.69
CDR2-204ENST00000564542 KRTAP19-4Q3LI73 84 aa4.47□□□□□ -1.69
CDR2-204ENST00000564542 PRR15LQ9BU68 103 aa4.39□□□□□ -1.71
CDR2-204ENST00000564542 KRTAP4-11Q9BYQ6 195 aa4.39□□□□□ -1.71
CDR2-204ENST00000564542 KRTAP25-1Q3LHN0 102 aa4.33□□□□□ -1.72
CDR2-204ENST00000564542 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
CDR2-204ENST00000564542 LINC01558Q9Y6Z2 57 aa4.26□□□□□ -1.73
CDR2-204ENST00000564542 KRTAP5-8O75690 187 aa4.25□□□□□ -1.73
CDR2-204ENST00000564542 ANAPC13Q9BS18 74 aa4.25□□□□□ -1.73
CDR2-204ENST00000564542 MT1AP04731 61 aa4.24□□□□□ -1.73
CDR2-204ENST00000564542 LCE3CQ5T5A8 94 aa4.24□□□□□ -1.73
CDR2-204ENST00000564542 AHNAKQ09666 5890 aaKnown RBP4.24□□□□□ -1.73
CDR2-204ENST00000564542 UQCR11O14957 56 aa4.23□□□□□ -1.73
CDR2-204ENST00000564542 KRTAP6-1Q3LI64 71 aa4.23□□□□□ -1.73
CDR2-204ENST00000564542 MUC5ACP98088 5654 aa4.23□□□□□ -1.73
CDR2-204ENST00000564542 KRTAP15-1Q3LI76 137 aa4.22□□□□□ -1.73
CDR2-204ENST00000564542 MUC5BQ9HC84 5762 aaPredicted RBP4.2□□□□□ -1.74
CDR2-204ENST00000564542 ATP5EP56381 51 aaPredicted RBP4.18□□□□□ -1.74
CDR2-204ENST00000564542 KRTAP9-4Q9BYQ2 154 aa4.12□□□□□ -1.75
CDR2-204ENST00000564542 MIR22HGQ0VDD5 57 aa4.1□□□□□ -1.75
CDR2-204ENST00000564542 KRTAP6-2Q3LI66 62 aa4.1□□□□□ -1.75
CDR2-204ENST00000564542 OBSCNQ5VST9 7968 aa4.1□□□□□ -1.75
CDR2-204ENST00000564542 CCDC179H3BU77 68 aa4.09□□□□□ -1.75
CDR2-204ENST00000564542 K7ERS5 55 aa4.09□□□□□ -1.75
CDR2-204ENST00000564542 KRTAP9-9Q9BYP9 154 aa4.08□□□□□ -1.76
CDR2-204ENST00000564542 KRTAP9-6A8MVA2 160 aa4.01□□□□□ -1.77
CDR2-204ENST00000564542 TMEM258P61165 79 aa4.01□□□□□ -1.77
CDR2-204ENST00000564542 KRTAP4-12Q9BQ66 201 aa4.01□□□□□ -1.77
CDR2-204ENST00000564542 RPS28P62857 69 aaKnown RBP3.97□□□□□ -1.77
CDR2-204ENST00000564542 KRTAP5-1Q6L8H4 278 aa3.93□□□□□ -1.78
CDR2-204ENST00000564542 MT3P25713 68 aa3.89□□□□□ -1.79
CDR2-204ENST00000564542 PSPHP1O15172 72 aa3.83□□□□□ -1.8
CDR2-204ENST00000564542 CDC42SE1Q9NRR8 79 aa3.83□□□□□ -1.8
CDR2-204ENST00000564542 Q1T7F1 81 aa3.81□□□□□ -1.8
CDR2-204ENST00000564542 V9GYY9 64 aa3.79□□□□□ -1.8
CDR2-204ENST00000564542 ROMO1P60602 79 aa3.74□□□□□ -1.81
CDR2-204ENST00000564542 PRAC1Q96KF2 57 aa3.74□□□□□ -1.81
CDR2-204ENST00000564542 A6NED7 52 aa3.69□□□□□ -1.82
CDR2-204ENST00000564542 PRO0628Q9UI54 55 aa3.66□□□□□ -1.82
CDR2-204ENST00000564542 LCE1EQ5T753 118 aa3.65□□□□□ -1.83
CDR2-204ENST00000564542 BRK1Q8WUW1 75 aa3.61□□□□□ -1.83
CDR2-204ENST00000564542 KRTAP4-2Q9BYR5 136 aa3.56□□□□□ -1.84
CDR2-204ENST00000564542 NDUFAF8A1L188 74 aa3.44□□□□□ -1.86
CDR2-204ENST00000564542 LCE1BQ5T7P3 118 aa3.44□□□□□ -1.86
CDR2-204ENST00000564542 PMAIP1Q13794 54 aa3.43□□□□□ -1.86
CDR2-204ENST00000564542 LCE1CQ5T751 118 aa3.39□□□□□ -1.87
CDR2-204ENST00000564542 KTN1-AS1Q86SY8 53 aa3.36□□□□□ -1.87
CDR2-204ENST00000564542 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
CDR2-204ENST00000564542 LCE1FQ5T754 118 aa3.09□□□□□ -1.91
CDR2-204ENST00000564542 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.06□□□□□ -1.92
CDR2-204ENST00000564542 LCE3DQ9BYE3 92 aa2.99□□□□□ -1.93
CDR2-204ENST00000564542 PHGR1C9JFL3 82 aa2.93□□□□□ -1.94
CDR2-204ENST00000564542 KRTAP21-2Q3LI59 83 aa2.8□□□□□ -1.96
CDR2-204ENST00000564542 LUZP6Q538Z0 58 aa2.79□□□□□ -1.96
CDR2-204ENST00000564542 LCE3EQ5T5B0 92 aa2.76□□□□□ -1.97
CDR2-204ENST00000564542 KRTAP4-4Q9BYR3 166 aa2.59□□□□□ -1.99
CDR2-204ENST00000564542 MUC19Q7Z5P9 8384 aa2.54□□□□□ -2
CDR2-204ENST00000564542 INE1O15225 51 aa2.28□□□□□ -2.04
CDR2-204ENST00000564542 KRTAP21-1Q3LI58 79 aa2.24□□□□□ -2.05
CDR2-204ENST00000564542 PRM1P04553 51 aa1.9□□□□□ -2.11
CDR2-204ENST00000564542 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 78 of 20,778 RNA–protein pairs in 621.3 ms