RNA–Protein interactions for RNA: ENST00000564503.5

CAPN3-212, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-212ENST00000564503 FAT4Q6V0I7 4981 aa2.2□□□□□ -2.06
CAPN3-212ENST00000564503 PP632Q6XCG6 107 aa2.19□□□□□ -2.06
CAPN3-212ENST00000564503 MT1HL1P0DM35 61 aa2.17□□□□□ -2.06
CAPN3-212ENST00000564503 LCE1CQ5T751 118 aa2.12□□□□□ -2.07
CAPN3-212ENST00000564503 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
CAPN3-212ENST00000564503 CRCT1Q9UGL9 99 aa2.11□□□□□ -2.07
CAPN3-212ENST00000564503 FSIP2Q5CZC0 6907 aa2.11□□□□□ -2.07
CAPN3-212ENST00000564503 MUC17Q685J3 4493 aa2.1□□□□□ -2.07
CAPN3-212ENST00000564503 INE1O15225 51 aa2.08□□□□□ -2.08
CAPN3-212ENST00000564503 TNP1P09430 55 aa2.07□□□□□ -2.08
CAPN3-212ENST00000564503 LRP2P98164 4655 aa2.07□□□□□ -2.08
CAPN3-212ENST00000564503 SPRR5A0A1B0GTR4 108 aa2.06□□□□□ -2.08
CAPN3-212ENST00000564503 LPAP08519 4548 aa2.05□□□□□ -2.08
CAPN3-212ENST00000564503 KRTAP19-2Q3LHN2 52 aa2.04□□□□□ -2.08
CAPN3-212ENST00000564503 KRTAP4-1Q9BYQ7 146 aa2.04□□□□□ -2.08
CAPN3-212ENST00000564503 FLGP20930 4061 aaPredicted RBP2.03□□□□□ -2.08
CAPN3-212ENST00000564503 LCE3DQ9BYE3 92 aa2.01□□□□□ -2.09
CAPN3-212ENST00000564503 SPRR2GQ9BYE4 73 aa1.93□□□□□ -2.1
CAPN3-212ENST00000564503 KRTAP8-1Q8IUC2 63 aa1.89□□□□□ -2.11
CAPN3-212ENST00000564503 SSPOA2VEC9 5147 aa1.86□□□□□ -2.11
CAPN3-212ENST00000564503 KRTAP5-8O75690 187 aa1.84□□□□□ -2.11
CAPN3-212ENST00000564503 KRTAP19-8Q3LI54 63 aa1.84□□□□□ -2.11
CAPN3-212ENST00000564503 SYNE2Q8WXH0 6885 aaKnown RBP1.84□□□□□ -2.12
CAPN3-212ENST00000564503 M0R2T5 61 aa1.83□□□□□ -2.12
CAPN3-212ENST00000564503 KRTAP10-10P60014 251 aa1.82□□□□□ -2.12
CAPN3-212ENST00000564503 KRTAP12-3P60328 96 aa1.82□□□□□ -2.12
CAPN3-212ENST00000564503 MT2AP02795 61 aa1.81□□□□□ -2.12
CAPN3-212ENST00000564503 MT1FP04733 61 aa1.81□□□□□ -2.12
CAPN3-212ENST00000564503 USH2AO75445 5202 aa1.81□□□□□ -2.12
CAPN3-212ENST00000564503 NEBP20929 6669 aa1.81□□□□□ -2.12
CAPN3-212ENST00000564503 MT1HP80294 61 aa1.8□□□□□ -2.12
CAPN3-212ENST00000564503 MT1BP07438 61 aa1.79□□□□□ -2.12
CAPN3-212ENST00000564503 MT1XP80297 61 aa1.79□□□□□ -2.12
CAPN3-212ENST00000564503 KRTAP20-1Q3LI63 56 aa1.79□□□□□ -2.12
CAPN3-212ENST00000564503 FCGBPQ9Y6R7 5405 aaPredicted RBP1.76□□□□□ -2.13
CAPN3-212ENST00000564503 KRTAP5-7Q6L8G8 165 aa1.75□□□□□ -2.13
CAPN3-212ENST00000564503 GPR98Q8WXG9 6306 aa1.75□□□□□ -2.13
CAPN3-212ENST00000564503 MACF1Q9UPN3 7388 aaKnown RBP1.74□□□□□ -2.13
CAPN3-212ENST00000564503 MUC19Q7Z5P9 8384 aa1.72□□□□□ -2.13
CAPN3-212ENST00000564503 KRTAP6-3Q3LI67 103 aa1.7□□□□□ -2.14
CAPN3-212ENST00000564503 KRTAP19-5Q3LI72 72 aa1.7□□□□□ -2.14
CAPN3-212ENST00000564503 MUC12Q9UKN1 5478 aa1.68□□□□□ -2.14
CAPN3-212ENST00000564503 KRTAP2-3P0C7H8 128 aa1.66□□□□□ -2.14
CAPN3-212ENST00000564503 KRTAP2-4Q9BYR9 128 aa1.66□□□□□ -2.14
CAPN3-212ENST00000564503 KRTAP2-1Q9BYU5 128 aa1.66□□□□□ -2.14
CAPN3-212ENST00000564503 KMT2DO14686 5537 aa1.64□□□□□ -2.15
CAPN3-212ENST00000564503 MDN1Q9NU22 5596 aa1.6□□□□□ -2.15
CAPN3-212ENST00000564503 KRTAP19-7Q3SYF9 63 aa1.59□□□□□ -2.15
CAPN3-212ENST00000564503 MT1LQ93083 61 aa1.57□□□□□ -2.16
CAPN3-212ENST00000564503 MT1EP04732 61 aa1.55□□□□□ -2.16
CAPN3-212ENST00000564503 KRTAP21-2Q3LI59 83 aa1.52□□□□□ -2.17
CAPN3-212ENST00000564503 AHNAK2Q8IVF2 5795 aa1.49□□□□□ -2.17
CAPN3-212ENST00000564503 KRTAP12-4P60329 112 aa1.49□□□□□ -2.17
CAPN3-212ENST00000564503 DSTQ03001 7570 aaKnown RBP1.47□□□□□ -2.17
CAPN3-212ENST00000564503 KRTAP19-6Q3LI70 58 aa1.46□□□□□ -2.18
CAPN3-212ENST00000564503 MT1GP13640 62 aa1.45□□□□□ -2.18
CAPN3-212ENST00000564503 MT1MQ8N339 61 aa1.45□□□□□ -2.18
CAPN3-212ENST00000564503 KRTAP19-3Q7Z4W3 81 aa1.44□□□□□ -2.18
CAPN3-212ENST00000564503 HMCN1Q96RW7 5635 aa1.44□□□□□ -2.18
CAPN3-212ENST00000564503 KRTAP5-10Q6L8G5 202 aa1.43□□□□□ -2.18
CAPN3-212ENST00000564503 MT1AP04731 61 aa1.41□□□□□ -2.18
CAPN3-212ENST00000564503 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
CAPN3-212ENST00000564503 SPRR2EP22531 72 aa1.37□□□□□ -2.19
CAPN3-212ENST00000564503 SPRR2BP35325 72 aa1.37□□□□□ -2.19
CAPN3-212ENST00000564503 SPRR2AP35326 72 aa1.37□□□□□ -2.19
CAPN3-212ENST00000564503 PRM1P04553 51 aa1.33□□□□□ -2.2
CAPN3-212ENST00000564503 SPRR2DP22532 72 aa1.33□□□□□ -2.2
CAPN3-212ENST00000564503 KRTAP6-1Q3LI64 71 aa1.32□□□□□ -2.2
CAPN3-212ENST00000564503 MUC5BQ9HC84 5762 aaPredicted RBP1.32□□□□□ -2.2
CAPN3-212ENST00000564503 SPRR2FQ96RM1 72 aa1.31□□□□□ -2.2
CAPN3-212ENST00000564503 SYNE1Q8NF91 8797 aaKnown RBP1.3□□□□□ -2.2
CAPN3-212ENST00000564503 MUC5ACP98088 5654 aa1.25□□□□□ -2.21
CAPN3-212ENST00000564503 KRTAP6-2Q3LI66 62 aa1.25□□□□□ -2.21
CAPN3-212ENST00000564503 MT4P47944 62 aa1.2□□□□□ -2.22
CAPN3-212ENST00000564503 KRTAP20-2Q3LI61 65 aa1.02□□□□□ -2.25
CAPN3-212ENST00000564503 KRTAP21-1Q3LI58 79 aa0.86□□□□□ -2.27
CAPN3-212ENST00000564503 PHGR1C9JFL3 82 aa0.85□□□□□ -2.27
CAPN3-212ENST00000564503 MUC16Q8WXI7 14507 aa0.7□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 38.3 ms