RNA–Protein interactions for RNA: ENST00000564470.1

ATP2A1-207, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1, humanhuman

TSL 1 (best)

Gene ATP2A1, Length 467 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1-207ENST00000564470 SYNE2Q8WXH0 6885 aaKnown RBP1.9□□□□□ -2.1
ATP2A1-207ENST00000564470 UQCR11O14957 56 aa1.9□□□□□ -2.11
ATP2A1-207ENST00000564470 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
ATP2A1-207ENST00000564470 USH2AO75445 5202 aa1.88□□□□□ -2.11
ATP2A1-207ENST00000564470 SSPOA2VEC9 5147 aa1.88□□□□□ -2.11
ATP2A1-207ENST00000564470 MACF1Q9UPN3 7388 aaKnown RBP1.86□□□□□ -2.11
ATP2A1-207ENST00000564470 H1FX-AS1Q4G0G2 97 aa1.85□□□□□ -2.11
ATP2A1-207ENST00000564470 KRTAP4-1Q9BYQ7 146 aa1.85□□□□□ -2.11
ATP2A1-207ENST00000564470 FCGBPQ9Y6R7 5405 aaPredicted RBP1.84□□□□□ -2.11
ATP2A1-207ENST00000564470 A0A1B0GU69 56 aa1.84□□□□□ -2.11
ATP2A1-207ENST00000564470 KRTAP20-1Q3LI63 56 aa1.84□□□□□ -2.11
ATP2A1-207ENST00000564470 KRTAP6-3Q3LI67 103 aa1.84□□□□□ -2.11
ATP2A1-207ENST00000564470 SPATA8Q6RVD6 105 aa1.84□□□□□ -2.11
ATP2A1-207ENST00000564470 INE1O15225 51 aa1.83□□□□□ -2.12
ATP2A1-207ENST00000564470 NEBP20929 6669 aa1.82□□□□□ -2.12
ATP2A1-207ENST00000564470 KRTAP19-2Q3LHN2 52 aa1.82□□□□□ -2.12
ATP2A1-207ENST00000564470 S4R3F8 94 aa1.81□□□□□ -2.12
ATP2A1-207ENST00000564470 H0YAA0 97 aa1.8□□□□□ -2.12
ATP2A1-207ENST00000564470 FLGP20930 4061 aaPredicted RBP1.79□□□□□ -2.12
ATP2A1-207ENST00000564470 KRTAP19-6Q3LI70 58 aa1.76□□□□□ -2.13
ATP2A1-207ENST00000564470 MUC19Q7Z5P9 8384 aa1.76□□□□□ -2.13
ATP2A1-207ENST00000564470 M0QZ58 72 aa1.75□□□□□ -2.13
ATP2A1-207ENST00000564470 KRTAP10-10P60014 251 aa1.73□□□□□ -2.13
ATP2A1-207ENST00000564470 MUC12Q9UKN1 5478 aa1.72□□□□□ -2.13
ATP2A1-207ENST00000564470 KRTAP2-3P0C7H8 128 aa1.72□□□□□ -2.13
ATP2A1-207ENST00000564470 KRTAP13-4Q3LI77 160 aa1.72□□□□□ -2.13
ATP2A1-207ENST00000564470 KRTAP5-7Q6L8G8 165 aa1.72□□□□□ -2.13
ATP2A1-207ENST00000564470 KRTAP2-4Q9BYR9 128 aa1.72□□□□□ -2.13
ATP2A1-207ENST00000564470 MT2AP02795 61 aa1.71□□□□□ -2.14
ATP2A1-207ENST00000564470 CRIPTQ9P021 101 aa1.7□□□□□ -2.14
ATP2A1-207ENST00000564470 MT1FP04733 61 aa1.69□□□□□ -2.14
ATP2A1-207ENST00000564470 PLAC4Q8WY50 150 aa1.69□□□□□ -2.14
ATP2A1-207ENST00000564470 KMT2DO14686 5537 aa1.68□□□□□ -2.14
ATP2A1-207ENST00000564470 KRTAP12-1P59990 96 aa1.68□□□□□ -2.14
ATP2A1-207ENST00000564470 A0A0D9SG42 100 aa1.66□□□□□ -2.14
ATP2A1-207ENST00000564470 GPR98Q8WXG9 6306 aa1.65□□□□□ -2.14
ATP2A1-207ENST00000564470 KRTAP2-1Q9BYU5 128 aa1.65□□□□□ -2.15
ATP2A1-207ENST00000564470 SPRR2GQ9BYE4 73 aa1.64□□□□□ -2.15
ATP2A1-207ENST00000564470 MDN1Q9NU22 5596 aa1.61□□□□□ -2.15
ATP2A1-207ENST00000564470 SPRR2EP22531 72 aa1.61□□□□□ -2.15
ATP2A1-207ENST00000564470 SPRR2BP35325 72 aa1.61□□□□□ -2.15
ATP2A1-207ENST00000564470 SPRR2AP35326 72 aa1.61□□□□□ -2.15
ATP2A1-207ENST00000564470 KRTAP19-8Q3LI54 63 aa1.6□□□□□ -2.15
ATP2A1-207ENST00000564470 C10orf95Q9H7T3 257 aa1.59□□□□□ -2.15
ATP2A1-207ENST00000564470 SPRR5A0A1B0GTR4 108 aa1.58□□□□□ -2.16
ATP2A1-207ENST00000564470 SPRR2DP22532 72 aa1.56□□□□□ -2.16
ATP2A1-207ENST00000564470 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
ATP2A1-207ENST00000564470 MT1BP07438 61 aa1.54□□□□□ -2.16
ATP2A1-207ENST00000564470 TNP1P09430 55 aa1.52□□□□□ -2.17
ATP2A1-207ENST00000564470 MT1XP80297 61 aa1.51□□□□□ -2.17
ATP2A1-207ENST00000564470 KRTAP21-2Q3LI59 83 aa1.51□□□□□ -2.17
ATP2A1-207ENST00000564470 KRTAP8-1Q8IUC2 63 aa1.5□□□□□ -2.17
ATP2A1-207ENST00000564470 AHNAK2Q8IVF2 5795 aa1.47□□□□□ -2.17
ATP2A1-207ENST00000564470 DSTQ03001 7570 aaKnown RBP1.46□□□□□ -2.18
ATP2A1-207ENST00000564470 HMCN1Q96RW7 5635 aa1.45□□□□□ -2.18
ATP2A1-207ENST00000564470 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
ATP2A1-207ENST00000564470 KRTAP12-3P60328 96 aa1.39□□□□□ -2.19
ATP2A1-207ENST00000564470 KRTAP12-4P60329 112 aa1.37□□□□□ -2.19
ATP2A1-207ENST00000564470 KRTAP19-5Q3LI72 72 aa1.36□□□□□ -2.19
ATP2A1-207ENST00000564470 MT4P47944 62 aa1.35□□□□□ -2.19
ATP2A1-207ENST00000564470 KRTAP19-7Q3SYF9 63 aa1.35□□□□□ -2.19
ATP2A1-207ENST00000564470 MT1EP04732 61 aa1.32□□□□□ -2.2
ATP2A1-207ENST00000564470 MT1LQ93083 61 aa1.3□□□□□ -2.2
ATP2A1-207ENST00000564470 KRTAP19-3Q7Z4W3 81 aa1.28□□□□□ -2.2
ATP2A1-207ENST00000564470 MT1GP13640 62 aa1.27□□□□□ -2.21
ATP2A1-207ENST00000564470 AHNAKQ09666 5890 aaKnown RBP1.27□□□□□ -2.21
ATP2A1-207ENST00000564470 MT1MQ8N339 61 aa1.23□□□□□ -2.21
ATP2A1-207ENST00000564470 MUC5BQ9HC84 5762 aaPredicted RBP1.22□□□□□ -2.21
ATP2A1-207ENST00000564470 MUC5ACP98088 5654 aa1.22□□□□□ -2.21
ATP2A1-207ENST00000564470 KRTAP20-2Q3LI61 65 aa1.21□□□□□ -2.22
ATP2A1-207ENST00000564470 SYNE1Q8NF91 8797 aaKnown RBP1.13□□□□□ -2.23
ATP2A1-207ENST00000564470 MT1AP04731 61 aa1.11□□□□□ -2.23
ATP2A1-207ENST00000564470 KRTAP6-1Q3LI64 71 aa1.08□□□□□ -2.24
ATP2A1-207ENST00000564470 KRTAP6-2Q3LI66 62 aa0.99□□□□□ -2.25
ATP2A1-207ENST00000564470 PHGR1C9JFL3 82 aa0.86□□□□□ -2.27
ATP2A1-207ENST00000564470 PRM1P04553 51 aa0.86□□□□□ -2.27
ATP2A1-207ENST00000564470 MUC16Q8WXI7 14507 aa0.75□□□□□ -2.29
ATP2A1-207ENST00000564470 KRTAP21-1Q3LI58 79 aa0.69□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 224.3 ms