RNA–Protein interactions for RNA: ENST00000564403.6

TCF4-224, Transcript of transcription factor 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TCF4, Length 2,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-224ENST00000564403 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
TCF4-224ENST00000564403 KRTAP4-7Q9BYR0 210 aa3.48□□□□□ -1.85
TCF4-224ENST00000564403 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.86
TCF4-224ENST00000564403 KRTAP4-9Q9BYQ8 210 aa3.46□□□□□ -1.86
TCF4-224ENST00000564403 KRTAP8-1Q8IUC2 63 aa3.43□□□□□ -1.86
TCF4-224ENST00000564403 KRTAP12-3P60328 96 aa3.4□□□□□ -1.86
TCF4-224ENST00000564403 LCE1AQ5T7P2 110 aa3.39□□□□□ -1.87
TCF4-224ENST00000564403 KRTAP19-5Q3LI72 72 aa3.36□□□□□ -1.87
TCF4-224ENST00000564403 KRTAP4-11Q9BYQ6 195 aa3.36□□□□□ -1.87
TCF4-224ENST00000564403 KRTAP6-3Q3LI67 103 aa3.33□□□□□ -1.88
TCF4-224ENST00000564403 FCGBPQ9Y6R7 5405 aaPredicted RBP3.33□□□□□ -1.88
TCF4-224ENST00000564403 KRTAP4-2Q9BYR5 136 aa3.32□□□□□ -1.88
TCF4-224ENST00000564403 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
TCF4-224ENST00000564403 MUC12Q9UKN1 5478 aa3.29□□□□□ -1.88
TCF4-224ENST00000564403 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
TCF4-224ENST00000564403 MACF1Q9UPN3 7388 aaKnown RBP3.26□□□□□ -1.89
TCF4-224ENST00000564403 KRTAP19-7Q3SYF9 63 aa3.26□□□□□ -1.89
TCF4-224ENST00000564403 KRTAP19-6Q3LI70 58 aa3.25□□□□□ -1.89
TCF4-224ENST00000564403 SYNE2Q8WXH0 6885 aaKnown RBP3.23□□□□□ -1.89
TCF4-224ENST00000564403 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.9
TCF4-224ENST00000564403 LCE3CQ5T5A8 94 aa3.18□□□□□ -1.9
TCF4-224ENST00000564403 KRTAP12-4P60329 112 aa3.16□□□□□ -1.9
TCF4-224ENST00000564403 MT1EP04732 61 aa3.15□□□□□ -1.91
TCF4-224ENST00000564403 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
TCF4-224ENST00000564403 MT1LQ93083 61 aa3.12□□□□□ -1.91
TCF4-224ENST00000564403 KRTAP2-3P0C7H8 128 aa3.09□□□□□ -1.91
TCF4-224ENST00000564403 KRTAP2-4Q9BYR9 128 aa3.09□□□□□ -1.91
TCF4-224ENST00000564403 KRTAP2-1Q9BYU5 128 aa3.09□□□□□ -1.91
TCF4-224ENST00000564403 MDN1Q9NU22 5596 aa3.09□□□□□ -1.92
TCF4-224ENST00000564403 KRTAP4-3Q9BYR4 195 aa3.07□□□□□ -1.92
TCF4-224ENST00000564403 SPRR2FQ96RM1 72 aa3.02□□□□□ -1.93
TCF4-224ENST00000564403 KRTAP19-3Q7Z4W3 81 aa2.97□□□□□ -1.93
TCF4-224ENST00000564403 CRCT1Q9UGL9 99 aa2.97□□□□□ -1.93
TCF4-224ENST00000564403 MT1MQ8N339 61 aa2.96□□□□□ -1.94
TCF4-224ENST00000564403 MT1GP13640 62 aa2.96□□□□□ -1.94
TCF4-224ENST00000564403 SYNE1Q8NF91 8797 aaKnown RBP2.9□□□□□ -1.94
TCF4-224ENST00000564403 LCE3EQ5T5B0 92 aa2.86□□□□□ -1.95
TCF4-224ENST00000564403 KRTAP5-9P26371 169 aa2.8□□□□□ -1.96
TCF4-224ENST00000564403 KRTAP5-3Q6L8H2 238 aa2.8□□□□□ -1.96
TCF4-224ENST00000564403 GPR98Q8WXG9 6306 aa2.78□□□□□ -1.96
TCF4-224ENST00000564403 MT3P25713 68 aa2.78□□□□□ -1.96
TCF4-224ENST00000564403 SPRR2EP22531 72 aa2.77□□□□□ -1.97
TCF4-224ENST00000564403 SPRR2BP35325 72 aa2.77□□□□□ -1.97
TCF4-224ENST00000564403 SPRR2AP35326 72 aa2.77□□□□□ -1.97
TCF4-224ENST00000564403 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
TCF4-224ENST00000564403 PRM1P04553 51 aa2.75□□□□□ -1.97
TCF4-224ENST00000564403 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
TCF4-224ENST00000564403 KRTAP6-1Q3LI64 71 aa2.68□□□□□ -1.98
TCF4-224ENST00000564403 SPRR2DP22532 72 aa2.65□□□□□ -1.99
TCF4-224ENST00000564403 NEBP20929 6669 aa2.64□□□□□ -1.99
TCF4-224ENST00000564403 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
TCF4-224ENST00000564403 MT1AP04731 61 aa2.59□□□□□ -1.99
TCF4-224ENST00000564403 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
TCF4-224ENST00000564403 KRTAP20-1Q3LI63 56 aa2.45□□□□□ -2.02
TCF4-224ENST00000564403 KRTAP6-2Q3LI66 62 aa2.44□□□□□ -2.02
TCF4-224ENST00000564403 MT4P47944 62 aa2.4□□□□□ -2.03
TCF4-224ENST00000564403 HMCN1Q96RW7 5635 aa2.38□□□□□ -2.03
TCF4-224ENST00000564403 KRTAP5-4Q6L8H1 288 aa2.38□□□□□ -2.03
TCF4-224ENST00000564403 AHNAKQ09666 5890 aaKnown RBP2.33□□□□□ -2.04
TCF4-224ENST00000564403 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
TCF4-224ENST00000564403 KRTAP20-2Q3LI61 65 aa2.27□□□□□ -2.05
TCF4-224ENST00000564403 MUC19Q7Z5P9 8384 aa2.24□□□□□ -2.05
TCF4-224ENST00000564403 KRTAP5-7Q6L8G8 165 aa2.23□□□□□ -2.05
TCF4-224ENST00000564403 KRTAP5-2Q701N4 177 aa2.18□□□□□ -2.06
TCF4-224ENST00000564403 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
TCF4-224ENST00000564403 LCE1BQ5T7P3 118 aa2.16□□□□□ -2.06
TCF4-224ENST00000564403 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.16□□□□□ -2.06
TCF4-224ENST00000564403 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
TCF4-224ENST00000564403 AHNAK2Q8IVF2 5795 aa2□□□□□ -2.09
TCF4-224ENST00000564403 KRTAP5-10Q6L8G5 202 aa1.95□□□□□ -2.1
TCF4-224ENST00000564403 KRTAP5-1Q6L8H4 278 aa1.92□□□□□ -2.1
TCF4-224ENST00000564403 KRTAP5-8O75690 187 aa1.85□□□□□ -2.11
TCF4-224ENST00000564403 KRTAP21-1Q3LI58 79 aa1.85□□□□□ -2.11
TCF4-224ENST00000564403 KRTAP4-4Q9BYR3 166 aa1.8□□□□□ -2.12
TCF4-224ENST00000564403 KRTAP21-2Q3LI59 83 aa1.73□□□□□ -2.13
TCF4-224ENST00000564403 PHGR1C9JFL3 82 aa1.39□□□□□ -2.19
TCF4-224ENST00000564403 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 86.6 ms