RNA–Protein interactions for RNA: ENST00000564252.1

NME3-206, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 2

Gene NME3, Length 599 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-206ENST00000564252 TNP1P09430 55 aa8.23□□□□□ -1.09
NME3-206ENST00000564252 KRTAP4-6Q9BYQ5 205 aa8.2□□□□□ -1.1
NME3-206ENST00000564252 KRTAP5-10Q6L8G5 202 aa8.15□□□□□ -1.1
NME3-206ENST00000564252 KRTAP4-7Q9BYR0 210 aa8.06□□□□□ -1.12
NME3-206ENST00000564252 KRTAP12-3P60328 96 aa7.99□□□□□ -1.13
NME3-206ENST00000564252 PRR15LQ9BU68 103 aa7.9□□□□□ -1.14
NME3-206ENST00000564252 KRTAP5-3Q6L8H2 238 aa7.89□□□□□ -1.15
NME3-206ENST00000564252 KRTAP5-7Q6L8G8 165 aa7.87□□□□□ -1.15
NME3-206ENST00000564252 KRTAP20-2Q3LI61 65 aa7.86□□□□□ -1.15
NME3-206ENST00000564252 KRTAP5-5Q701N2 237 aaPredicted RBP7.86□□□□□ -1.15
NME3-206ENST00000564252 ANAPC13Q9BS18 74 aa7.83□□□□□ -1.16
NME3-206ENST00000564252 SPRR5A0A1B0GTR4 108 aa7.78□□□□□ -1.16
NME3-206ENST00000564252 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
NME3-206ENST00000564252 CCDC179H3BU77 68 aa7.73□□□□□ -1.17
NME3-206ENST00000564252 ATP5EP56381 51 aaPredicted RBP7.72□□□□□ -1.17
NME3-206ENST00000564252 KRTAP12-4P60329 112 aa7.68□□□□□ -1.18
NME3-206ENST00000564252 SYNE1Q8NF91 8797 aaKnown RBP7.65□□□□□ -1.18
NME3-206ENST00000564252 LOC100996750A0A140TA64 210 aa7.65□□□□□ -1.18
NME3-206ENST00000564252 UQCR11O14957 56 aa7.64□□□□□ -1.19
NME3-206ENST00000564252 KRTAP25-1Q3LHN0 102 aa7.61□□□□□ -1.19
NME3-206ENST00000564252 KRTAP19-4Q3LI73 84 aa7.5□□□□□ -1.21
NME3-206ENST00000564252 MIR22HGQ0VDD5 57 aa7.44□□□□□ -1.22
NME3-206ENST00000564252 PCP4P48539 62 aa7.43□□□□□ -1.22
NME3-206ENST00000564252 TMEM258P61165 79 aa7.39□□□□□ -1.23
NME3-206ENST00000564252 KRTAP15-1Q3LI76 137 aa7.36□□□□□ -1.23
NME3-206ENST00000564252 K7ERS5 55 aa7.33□□□□□ -1.24
NME3-206ENST00000564252 LCE3CQ5T5A8 94 aa7.33□□□□□ -1.24
NME3-206ENST00000564252 KRTAP23-1A1A580 65 aa7.31□□□□□ -1.24
NME3-206ENST00000564252 KRTAP4-11Q9BYQ6 195 aa7.24□□□□□ -1.25
NME3-206ENST00000564252 KRTAP5-2Q701N4 177 aa7.23□□□□□ -1.25
NME3-206ENST00000564252 MT1AP04731 61 aa7.2□□□□□ -1.26
NME3-206ENST00000564252 KRTAP6-1Q3LI64 71 aa7.19□□□□□ -1.26
NME3-206ENST00000564252 PSPHP1O15172 72 aa7.12□□□□□ -1.27
NME3-206ENST00000564252 V9GYY9 64 aa7.05□□□□□ -1.28
NME3-206ENST00000564252 KRTAP5-8O75690 187 aa7.02□□□□□ -1.29
NME3-206ENST00000564252 Q1T7F1 81 aa7.01□□□□□ -1.29
NME3-206ENST00000564252 KRTAP9-4Q9BYQ2 154 aa6.99□□□□□ -1.29
NME3-206ENST00000564252 KRTAP9-6A8MVA2 160 aa6.97□□□□□ -1.29
NME3-206ENST00000564252 KRTAP6-2Q3LI66 62 aa6.92□□□□□ -1.3
NME3-206ENST00000564252 CDC42SE1Q9NRR8 79 aa6.92□□□□□ -1.3
NME3-206ENST00000564252 OBSCNQ5VST9 7968 aa6.89□□□□□ -1.31
NME3-206ENST00000564252 MUC5BQ9HC84 5762 aaPredicted RBP6.88□□□□□ -1.31
NME3-206ENST00000564252 AHNAKQ09666 5890 aaKnown RBP6.87□□□□□ -1.31
NME3-206ENST00000564252 MUC5ACP98088 5654 aa6.87□□□□□ -1.31
NME3-206ENST00000564252 A6NED7 52 aa6.84□□□□□ -1.31
NME3-206ENST00000564252 RPS28P62857 69 aaKnown RBP6.83□□□□□ -1.32
NME3-206ENST00000564252 ROMO1P60602 79 aa6.8□□□□□ -1.32
NME3-206ENST00000564252 KRTAP9-9Q9BYP9 154 aa6.68□□□□□ -1.34
NME3-206ENST00000564252 MT3P25713 68 aa6.59□□□□□ -1.35
NME3-206ENST00000564252 KRTAP5-1Q6L8H4 278 aa6.54□□□□□ -1.36
NME3-206ENST00000564252 LCE1EQ5T753 118 aa6.13□□□□□ -1.43
NME3-206ENST00000564252 BRK1Q8WUW1 75 aa6.07□□□□□ -1.44
NME3-206ENST00000564252 PRO0628Q9UI54 55 aa5.99□□□□□ -1.45
NME3-206ENST00000564252 KRTAP4-2Q9BYR5 136 aa5.85□□□□□ -1.47
NME3-206ENST00000564252 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
NME3-206ENST00000564252 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
NME3-206ENST00000564252 LCE1CQ5T751 118 aa5.7□□□□□ -1.5
NME3-206ENST00000564252 KTN1-AS1Q86SY8 53 aa5.54□□□□□ -1.52
NME3-206ENST00000564252 SVIPQ8NHG7 77 aa5.53□□□□□ -1.52
NME3-206ENST00000564252 KRTAP4-12Q9BQ66 201 aa5.4□□□□□ -1.54
NME3-206ENST00000564252 PRAC1Q96KF2 57 aa5.31□□□□□ -1.56
NME3-206ENST00000564252 LCE3DQ9BYE3 92 aa5.21□□□□□ -1.58
NME3-206ENST00000564252 KRTAP5-11Q6L8G4 156 aa5.2□□□□□ -1.58
NME3-206ENST00000564252 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.16□□□□□ -1.58
NME3-206ENST00000564252 LCE1FQ5T754 118 aa5.11□□□□□ -1.59
NME3-206ENST00000564252 LCE3EQ5T5B0 92 aa4.85□□□□□ -1.63
NME3-206ENST00000564252 KRTAP21-2Q3LI59 83 aa4.75□□□□□ -1.65
NME3-206ENST00000564252 PHGR1C9JFL3 82 aa4.74□□□□□ -1.65
NME3-206ENST00000564252 LUZP6Q538Z0 58 aa4.44□□□□□ -1.7
NME3-206ENST00000564252 KRTAP4-4Q9BYR3 166 aa4.39□□□□□ -1.71
NME3-206ENST00000564252 MUC19Q7Z5P9 8384 aa4.28□□□□□ -1.72
NME3-206ENST00000564252 NDUFAF8A1L188 74 aa4.27□□□□□ -1.73
NME3-206ENST00000564252 A0A0A0MQY5 61 aa3.85□□□□□ -1.79
NME3-206ENST00000564252 H3BS24 57 aa3.77□□□□□ -1.81
NME3-206ENST00000564252 INE1O15225 51 aa3.62□□□□□ -1.83
NME3-206ENST00000564252 KRTAP21-1Q3LI58 79 aa3.6□□□□□ -1.83
NME3-206ENST00000564252 PRM1P04553 51 aa3.47□□□□□ -1.85
NME3-206ENST00000564252 MUC16Q8WXI7 14507 aa3.03□□□□□ -1.92
Retrieved 78 of 20,778 RNA–protein pairs in 6.5 ms