RNA–Protein interactions for RNA: ENST00000563945.1

HERC2-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-204ENST00000563945 SMIM26A0A096LP01 95 aa7.2□□□□□ -1.26
HERC2-204ENST00000563945 LCE3AQ5TA76 89 aa7.19□□□□□ -1.26
HERC2-204ENST00000563945 TNP1P09430 55 aa7.18□□□□□ -1.26
HERC2-204ENST00000563945 CCDC179H3BU77 68 aa7.08□□□□□ -1.28
HERC2-204ENST00000563945 A0A1B0GU69 56 aa7.07□□□□□ -1.28
HERC2-204ENST00000563945 KRTAP5-7Q6L8G8 165 aa7.07□□□□□ -1.28
HERC2-204ENST00000563945 KRTAP5-3Q6L8H2 238 aa7.06□□□□□ -1.28
HERC2-204ENST00000563945 A8MU10 97 aa7.05□□□□□ -1.28
HERC2-204ENST00000563945 KRTAP4-7Q9BYR0 210 aa6.99□□□□□ -1.29
HERC2-204ENST00000563945 H7BZZ5 65 aa6.96□□□□□ -1.3
HERC2-204ENST00000563945 RPS28P62857 69 aaKnown RBP6.95□□□□□ -1.3
HERC2-204ENST00000563945 KRTAP12-3P60328 96 aa6.94□□□□□ -1.3
HERC2-204ENST00000563945 KRTAP20-2Q3LI61 65 aa6.94□□□□□ -1.3
HERC2-204ENST00000563945 SPRR5A0A1B0GTR4 108 aa6.88□□□□□ -1.31
HERC2-204ENST00000563945 KRTAP12-4P60329 112 aa6.88□□□□□ -1.31
HERC2-204ENST00000563945 TMEM258P61165 79 aa6.87□□□□□ -1.31
HERC2-204ENST00000563945 ATP5EP56381 51 aaPredicted RBP6.84□□□□□ -1.31
HERC2-204ENST00000563945 KRTAP5-5Q701N2 237 aaPredicted RBP6.81□□□□□ -1.32
HERC2-204ENST00000563945 PRR15LQ9BU68 103 aa6.78□□□□□ -1.32
HERC2-204ENST00000563945 LOC100996750A0A140TA64 210 aa6.64□□□□□ -1.35
HERC2-204ENST00000563945 SYNE1Q8NF91 8797 aaKnown RBP6.64□□□□□ -1.35
HERC2-204ENST00000563945 KRTAP25-1Q3LHN0 102 aa6.55□□□□□ -1.36
HERC2-204ENST00000563945 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
HERC2-204ENST00000563945 LINC01558Q9Y6Z2 57 aa6.51□□□□□ -1.37
HERC2-204ENST00000563945 UQCR11O14957 56 aa6.5□□□□□ -1.37
HERC2-204ENST00000563945 PRO0628Q9UI54 55 aa6.47□□□□□ -1.37
HERC2-204ENST00000563945 KRTAP4-11Q9BYQ6 195 aa6.45□□□□□ -1.38
HERC2-204ENST00000563945 V9GYY9 64 aa6.39□□□□□ -1.39
HERC2-204ENST00000563945 K7ERS5 55 aa6.37□□□□□ -1.39
HERC2-204ENST00000563945 Q1T7F1 81 aa6.37□□□□□ -1.39
HERC2-204ENST00000563945 KRTAP15-1Q3LI76 137 aa6.36□□□□□ -1.39
HERC2-204ENST00000563945 LCE3CQ5T5A8 94 aa6.35□□□□□ -1.39
HERC2-204ENST00000563945 MIR22HGQ0VDD5 57 aa6.3□□□□□ -1.4
HERC2-204ENST00000563945 KRTAP5-2Q701N4 177 aa6.3□□□□□ -1.4
HERC2-204ENST00000563945 MT1AP04731 61 aa6.28□□□□□ -1.4
HERC2-204ENST00000563945 KRTAP23-1A1A580 65 aa6.25□□□□□ -1.41
HERC2-204ENST00000563945 KRTAP6-1Q3LI64 71 aa6.25□□□□□ -1.41
HERC2-204ENST00000563945 AHNAKQ09666 5890 aaKnown RBP6.23□□□□□ -1.41
HERC2-204ENST00000563945 PSPHP1O15172 72 aa6.22□□□□□ -1.41
HERC2-204ENST00000563945 KRTAP5-8O75690 187 aa6.2□□□□□ -1.42
HERC2-204ENST00000563945 MUC5ACP98088 5654 aa6.17□□□□□ -1.42
HERC2-204ENST00000563945 BRK1Q8WUW1 75 aa6.16□□□□□ -1.42
HERC2-204ENST00000563945 MUC5BQ9HC84 5762 aaPredicted RBP6.13□□□□□ -1.43
HERC2-204ENST00000563945 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
HERC2-204ENST00000563945 OBSCNQ5VST9 7968 aa6.09□□□□□ -1.43
HERC2-204ENST00000563945 KRTAP6-2Q3LI66 62 aa6.08□□□□□ -1.44
HERC2-204ENST00000563945 KRTAP9-9Q9BYP9 154 aa6.06□□□□□ -1.44
HERC2-204ENST00000563945 A6NED7 52 aa6.05□□□□□ -1.44
HERC2-204ENST00000563945 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
HERC2-204ENST00000563945 CDC42SE1Q9NRR8 79 aa5.93□□□□□ -1.46
HERC2-204ENST00000563945 KRTAP9-6A8MVA2 160 aa5.91□□□□□ -1.46
HERC2-204ENST00000563945 KTN1-AS1Q86SY8 53 aa5.9□□□□□ -1.46
HERC2-204ENST00000563945 MT3P25713 68 aa5.82□□□□□ -1.48
HERC2-204ENST00000563945 ROMO1P60602 79 aa5.76□□□□□ -1.49
HERC2-204ENST00000563945 KRTAP5-1Q6L8H4 278 aa5.74□□□□□ -1.49
HERC2-204ENST00000563945 LCE1EQ5T753 118 aa5.39□□□□□ -1.55
HERC2-204ENST00000563945 PRAC1Q96KF2 57 aa5.27□□□□□ -1.57
HERC2-204ENST00000563945 LCE1BQ5T7P3 118 aa5.18□□□□□ -1.58
HERC2-204ENST00000563945 KRTAP4-2Q9BYR5 136 aa5.09□□□□□ -1.59
HERC2-204ENST00000563945 H3BS24 57 aa5.03□□□□□ -1.6
HERC2-204ENST00000563945 LCE1CQ5T751 118 aa5□□□□□ -1.61
HERC2-204ENST00000563945 KRTAP4-12Q9BQ66 201 aa4.82□□□□□ -1.64
HERC2-204ENST00000563945 NDUFAF8A1L188 74 aa4.58□□□□□ -1.68
HERC2-204ENST00000563945 LCE1FQ5T754 118 aa4.55□□□□□ -1.68
HERC2-204ENST00000563945 KRTAP5-11Q6L8G4 156 aa4.55□□□□□ -1.68
HERC2-204ENST00000563945 LCE3DQ9BYE3 92 aa4.52□□□□□ -1.69
HERC2-204ENST00000563945 LUZP6Q538Z0 58 aa4.47□□□□□ -1.69
HERC2-204ENST00000563945 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
HERC2-204ENST00000563945 A0A0A0MQY5 61 aa4.4□□□□□ -1.71
HERC2-204ENST00000563945 PHGR1C9JFL3 82 aa4.32□□□□□ -1.72
HERC2-204ENST00000563945 LCE3EQ5T5B0 92 aa4.19□□□□□ -1.74
HERC2-204ENST00000563945 KRTAP21-2Q3LI59 83 aa4.09□□□□□ -1.75
HERC2-204ENST00000563945 INE1O15225 51 aa4.05□□□□□ -1.76
HERC2-204ENST00000563945 KRTAP4-4Q9BYR3 166 aa3.87□□□□□ -1.79
HERC2-204ENST00000563945 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
HERC2-204ENST00000563945 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
HERC2-204ENST00000563945 PRM1P04553 51 aa2.9□□□□□ -1.95
HERC2-204ENST00000563945 MUC16Q8WXI7 14507 aa2.59□□□□□ -1.99
Retrieved 78 of 20,778 RNA–protein pairs in 162.4 ms