RNA–Protein interactions for RNA: ENST00000563856.1

CBFA2T3-205, Transcript of CBFA2/RUNX1 translocation partner 3, humanhuman

TSL 2

Gene CBFA2T3, Length 2,380 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBFA2T3-205ENST00000563856 KRTAP4-8Q9BYQ9 185 aa6.4□□□□□ -1.38
CBFA2T3-205ENST00000563856 KMT2DO14686 5537 aa6.35□□□□□ -1.39
CBFA2T3-205ENST00000563856 KRTAP4-7Q9BYR0 210 aa6.29□□□□□ -1.4
CBFA2T3-205ENST00000563856 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
CBFA2T3-205ENST00000563856 MACF1Q9UPN3 7388 aaKnown RBP6.28□□□□□ -1.4
CBFA2T3-205ENST00000563856 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.18□□□□□ -1.42
CBFA2T3-205ENST00000563856 MT1LQ93083 61 aa6.17□□□□□ -1.42
CBFA2T3-205ENST00000563856 SYNE2Q8WXH0 6885 aaKnown RBP6.11□□□□□ -1.43
CBFA2T3-205ENST00000563856 MT1EP04732 61 aa6.09□□□□□ -1.43
CBFA2T3-205ENST00000563856 KRTAP5-9P26371 169 aa6.07□□□□□ -1.44
CBFA2T3-205ENST00000563856 SPRR2FQ96RM1 72 aa6.06□□□□□ -1.44
CBFA2T3-205ENST00000563856 KRTAP12-4P60329 112 aa6.04□□□□□ -1.44
CBFA2T3-205ENST00000563856 KRTAP6-3Q3LI67 103 aa6.01□□□□□ -1.45
CBFA2T3-205ENST00000563856 MUC12Q9UKN1 5478 aa5.92□□□□□ -1.46
CBFA2T3-205ENST00000563856 KRTAP19-3Q7Z4W3 81 aa5.88□□□□□ -1.47
CBFA2T3-205ENST00000563856 KRTAP9-7A8MTY7 169 aa5.87□□□□□ -1.47
CBFA2T3-205ENST00000563856 LOC100996750A0A140TA64 210 aa5.84□□□□□ -1.47
CBFA2T3-205ENST00000563856 LCE1AQ5T7P2 110 aa5.82□□□□□ -1.48
CBFA2T3-205ENST00000563856 MT1GP13640 62 aa5.81□□□□□ -1.48
CBFA2T3-205ENST00000563856 LCE5AQ5TCM9 118 aa5.81□□□□□ -1.48
CBFA2T3-205ENST00000563856 SPRR2EP22531 72 aa5.78□□□□□ -1.48
CBFA2T3-205ENST00000563856 SPRR2BP35325 72 aa5.78□□□□□ -1.48
CBFA2T3-205ENST00000563856 SPRR2AP35326 72 aa5.78□□□□□ -1.48
CBFA2T3-205ENST00000563856 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
CBFA2T3-205ENST00000563856 MT1MQ8N339 61 aa5.74□□□□□ -1.49
CBFA2T3-205ENST00000563856 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
CBFA2T3-205ENST00000563856 NEBP20929 6669 aa5.63□□□□□ -1.51
CBFA2T3-205ENST00000563856 SPRR2DP22532 72 aa5.58□□□□□ -1.52
CBFA2T3-205ENST00000563856 MT1AP04731 61 aa5.56□□□□□ -1.52
CBFA2T3-205ENST00000563856 LCE3BQ5TA77 95 aa5.52□□□□□ -1.53
CBFA2T3-205ENST00000563856 KRTAP4-9Q9BYQ8 210 aa5.44□□□□□ -1.54
CBFA2T3-205ENST00000563856 PRM1P04553 51 aa5.43□□□□□ -1.54
CBFA2T3-205ENST00000563856 LCE3DQ9BYE3 92 aa5.42□□□□□ -1.54
CBFA2T3-205ENST00000563856 LCE3EQ5T5B0 92 aa5.42□□□□□ -1.54
CBFA2T3-205ENST00000563856 DSTQ03001 7570 aaKnown RBP5.4□□□□□ -1.55
CBFA2T3-205ENST00000563856 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
CBFA2T3-205ENST00000563856 SYNE1Q8NF91 8797 aaKnown RBP5.23□□□□□ -1.57
CBFA2T3-205ENST00000563856 KRTAP6-1Q3LI64 71 aa5.22□□□□□ -1.57
CBFA2T3-205ENST00000563856 KRTAP20-1Q3LI63 56 aa5.21□□□□□ -1.58
CBFA2T3-205ENST00000563856 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
CBFA2T3-205ENST00000563856 KRTAP4-6Q9BYQ5 205 aa5.08□□□□□ -1.6
CBFA2T3-205ENST00000563856 KRTAP6-2Q3LI66 62 aa5.07□□□□□ -1.6
CBFA2T3-205ENST00000563856 KRTAP5-4Q6L8H1 288 aa5.05□□□□□ -1.6
CBFA2T3-205ENST00000563856 LCE4AQ5TA78 99 aa4.97□□□□□ -1.61
CBFA2T3-205ENST00000563856 MT4P47944 62 aa4.82□□□□□ -1.64
CBFA2T3-205ENST00000563856 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
CBFA2T3-205ENST00000563856 LCE1DQ5T752 114 aa4.78□□□□□ -1.64
CBFA2T3-205ENST00000563856 KRTAP20-2Q3LI61 65 aa4.7□□□□□ -1.66
CBFA2T3-205ENST00000563856 HMCN1Q96RW7 5635 aa4.7□□□□□ -1.66
CBFA2T3-205ENST00000563856 MT3P25713 68 aa4.64□□□□□ -1.67
CBFA2T3-205ENST00000563856 KRTAP5-2Q701N4 177 aa4.56□□□□□ -1.68
CBFA2T3-205ENST00000563856 KRTAP5-3Q6L8H2 238 aa4.55□□□□□ -1.68
CBFA2T3-205ENST00000563856 LCE1EQ5T753 118 aa4.44□□□□□ -1.7
CBFA2T3-205ENST00000563856 OBSCNQ5VST9 7968 aa4.37□□□□□ -1.71
CBFA2T3-205ENST00000563856 AHNAK2Q8IVF2 5795 aa4.22□□□□□ -1.73
CBFA2T3-205ENST00000563856 KRTAP4-11Q9BYQ6 195 aa4.11□□□□□ -1.75
CBFA2T3-205ENST00000563856 KRTAP5-10Q6L8G5 202 aa4.06□□□□□ -1.76
CBFA2T3-205ENST00000563856 KRTAP5-8O75690 187 aa3.97□□□□□ -1.77
CBFA2T3-205ENST00000563856 KRTAP5-1Q6L8H4 278 aa3.95□□□□□ -1.78
CBFA2T3-205ENST00000563856 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
CBFA2T3-205ENST00000563856 KRTAP9-9Q9BYP9 154 aa3.9□□□□□ -1.79
CBFA2T3-205ENST00000563856 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
CBFA2T3-205ENST00000563856 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
CBFA2T3-205ENST00000563856 KRTAP5-7Q6L8G8 165 aa3.84□□□□□ -1.79
CBFA2T3-205ENST00000563856 KRTAP4-12Q9BQ66 201 aa3.81□□□□□ -1.8
CBFA2T3-205ENST00000563856 LCE1CQ5T751 118 aa3.75□□□□□ -1.81
CBFA2T3-205ENST00000563856 LCE1BQ5T7P3 118 aa3.75□□□□□ -1.81
CBFA2T3-205ENST00000563856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
CBFA2T3-205ENST00000563856 KRTAP21-1Q3LI58 79 aa3.51□□□□□ -1.85
CBFA2T3-205ENST00000563856 LCE1FQ5T754 118 aa3.49□□□□□ -1.85
CBFA2T3-205ENST00000563856 MUC5BQ9HC84 5762 aaPredicted RBP3.41□□□□□ -1.86
CBFA2T3-205ENST00000563856 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
CBFA2T3-205ENST00000563856 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
CBFA2T3-205ENST00000563856 AHNAKQ09666 5890 aaKnown RBP3.22□□□□□ -1.89
CBFA2T3-205ENST00000563856 KRTAP4-4Q9BYR3 166 aa3.02□□□□□ -1.93
CBFA2T3-205ENST00000563856 MUC19Q7Z5P9 8384 aa3.01□□□□□ -1.93
CBFA2T3-205ENST00000563856 PHGR1C9JFL3 82 aa2.86□□□□□ -1.95
CBFA2T3-205ENST00000563856 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 12.4 ms