RNA–Protein interactions for RNA: ENST00000563829.5

SCAMP2-204, Transcript of secretory carrier membrane protein 2, humanhuman

TSL 2

Gene SCAMP2, Length 3,162 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP2-204ENST00000563829 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
SCAMP2-204ENST00000563829 DSTQ03001 7570 aaKnown RBP4.02□□□□□ -1.77
SCAMP2-204ENST00000563829 KRTAP9-6A0A140TA67 174 aa4.01□□□□□ -1.77
SCAMP2-204ENST00000563829 KRTAP9-7A8MTY7 169 aa4.01□□□□□ -1.77
SCAMP2-204ENST00000563829 MT1EP04732 61 aa3.98□□□□□ -1.77
SCAMP2-204ENST00000563829 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
SCAMP2-204ENST00000563829 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
SCAMP2-204ENST00000563829 KRTAP19-4Q3LI73 84 aa3.95□□□□□ -1.78
SCAMP2-204ENST00000563829 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
SCAMP2-204ENST00000563829 MT1GP13640 62 aa3.93□□□□□ -1.78
SCAMP2-204ENST00000563829 KRTAP4-6Q9BYQ5 205 aa3.92□□□□□ -1.78
SCAMP2-204ENST00000563829 MUC12Q9UKN1 5478 aa3.9□□□□□ -1.79
SCAMP2-204ENST00000563829 KRTAP9-9Q9BYP9 154 aa3.89□□□□□ -1.79
SCAMP2-204ENST00000563829 KRTAP9-4Q9BYQ2 154 aa3.89□□□□□ -1.79
SCAMP2-204ENST00000563829 SSPOA2VEC9 5147 aa3.88□□□□□ -1.79
SCAMP2-204ENST00000563829 FCGBPQ9Y6R7 5405 aaPredicted RBP3.87□□□□□ -1.79
SCAMP2-204ENST00000563829 KRTAP4-12Q9BQ66 201 aa3.85□□□□□ -1.79
SCAMP2-204ENST00000563829 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.84□□□□□ -1.8
SCAMP2-204ENST00000563829 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
SCAMP2-204ENST00000563829 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
SCAMP2-204ENST00000563829 KRTAP4-9Q9BYQ8 210 aa3.81□□□□□ -1.8
SCAMP2-204ENST00000563829 LCE3BQ5TA77 95 aa3.77□□□□□ -1.81
SCAMP2-204ENST00000563829 MT1MQ8N339 61 aa3.7□□□□□ -1.82
SCAMP2-204ENST00000563829 PRM1P04553 51 aa3.69□□□□□ -1.82
SCAMP2-204ENST00000563829 SYNE2Q8WXH0 6885 aaKnown RBP3.66□□□□□ -1.82
SCAMP2-204ENST00000563829 KRTAP19-3Q7Z4W3 81 aa3.63□□□□□ -1.83
SCAMP2-204ENST00000563829 LCE3DQ9BYE3 92 aa3.61□□□□□ -1.83
SCAMP2-204ENST00000563829 LCE5AQ5TCM9 118 aa3.59□□□□□ -1.83
SCAMP2-204ENST00000563829 MACF1Q9UPN3 7388 aaKnown RBP3.59□□□□□ -1.84
SCAMP2-204ENST00000563829 LCE3EQ5T5B0 92 aa3.59□□□□□ -1.84
SCAMP2-204ENST00000563829 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
SCAMP2-204ENST00000563829 MT1AP04731 61 aa3.55□□□□□ -1.84
SCAMP2-204ENST00000563829 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
SCAMP2-204ENST00000563829 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
SCAMP2-204ENST00000563829 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
SCAMP2-204ENST00000563829 SPRR2FQ96RM1 72 aa3.45□□□□□ -1.86
SCAMP2-204ENST00000563829 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
SCAMP2-204ENST00000563829 KRTAP6-2Q3LI66 62 aa3.42□□□□□ -1.86
SCAMP2-204ENST00000563829 LCE1DQ5T752 114 aa3.42□□□□□ -1.86
SCAMP2-204ENST00000563829 LCE1AQ5T7P2 110 aa3.4□□□□□ -1.86
SCAMP2-204ENST00000563829 KRTAP2-2Q9BYT5 123 aa3.31□□□□□ -1.88
SCAMP2-204ENST00000563829 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
SCAMP2-204ENST00000563829 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SCAMP2-204ENST00000563829 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
SCAMP2-204ENST00000563829 SPRR2EP22531 72 aa3.08□□□□□ -1.92
SCAMP2-204ENST00000563829 SPRR2BP35325 72 aa3.08□□□□□ -1.92
SCAMP2-204ENST00000563829 SPRR2AP35326 72 aa3.08□□□□□ -1.92
SCAMP2-204ENST00000563829 LCE1FQ5T754 118 aa3.08□□□□□ -1.92
SCAMP2-204ENST00000563829 MT3P25713 68 aa3.01□□□□□ -1.93
SCAMP2-204ENST00000563829 SPRR2DP22532 72 aa2.92□□□□□ -1.94
SCAMP2-204ENST00000563829 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
SCAMP2-204ENST00000563829 MUC19Q7Z5P9 8384 aa2.79□□□□□ -1.96
SCAMP2-204ENST00000563829 MT4P47944 62 aa2.77□□□□□ -1.97
SCAMP2-204ENST00000563829 NEBP20929 6669 aa2.69□□□□□ -1.98
SCAMP2-204ENST00000563829 MUC5ACP98088 5654 aa2.67□□□□□ -1.98
SCAMP2-204ENST00000563829 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.98
SCAMP2-204ENST00000563829 HMCN1Q96RW7 5635 aa2.61□□□□□ -1.99
SCAMP2-204ENST00000563829 KRTAP5-4Q6L8H1 288 aa2.55□□□□□ -2
SCAMP2-204ENST00000563829 KRTAP5-10Q6L8G5 202 aa2.55□□□□□ -2
SCAMP2-204ENST00000563829 LCE1BQ5T7P3 118 aa2.51□□□□□ -2.01
SCAMP2-204ENST00000563829 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
SCAMP2-204ENST00000563829 KRTAP5-2Q701N4 177 aa2.41□□□□□ -2.02
SCAMP2-204ENST00000563829 KRTAP5-1Q6L8H4 278 aa2.38□□□□□ -2.03
SCAMP2-204ENST00000563829 KRTAP20-1Q3LI63 56 aa2.3□□□□□ -2.04
SCAMP2-204ENST00000563829 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
SCAMP2-204ENST00000563829 KRTAP5-11Q6L8G4 156 aa2.27□□□□□ -2.05
SCAMP2-204ENST00000563829 GPR98Q8WXG9 6306 aa2.21□□□□□ -2.06
SCAMP2-204ENST00000563829 KRTAP21-2Q3LI59 83 aa2.19□□□□□ -2.06
SCAMP2-204ENST00000563829 KRTAP4-4Q9BYR3 166 aa2.18□□□□□ -2.06
SCAMP2-204ENST00000563829 MUC5BQ9HC84 5762 aaPredicted RBP2.17□□□□□ -2.06
SCAMP2-204ENST00000563829 LCE1CQ5T751 118 aa2.16□□□□□ -2.06
SCAMP2-204ENST00000563829 AHNAK2Q8IVF2 5795 aa2.13□□□□□ -2.07
SCAMP2-204ENST00000563829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
SCAMP2-204ENST00000563829 KRTAP5-8O75690 187 aa1.87□□□□□ -2.11
SCAMP2-204ENST00000563829 KRTAP5-7Q6L8G8 165 aa1.83□□□□□ -2.12
SCAMP2-204ENST00000563829 AHNAKQ09666 5890 aaKnown RBP1.81□□□□□ -2.12
SCAMP2-204ENST00000563829 PHGR1C9JFL3 82 aa1.58□□□□□ -2.16
SCAMP2-204ENST00000563829 MUC16Q8WXI7 14507 aa1.17□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 6.1 ms