RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 PCP4P48539 62 aa7.25□□□□□ -1.25
CMTM3-206ENST00000563672 K7ERS5 55 aa7.24□□□□□ -1.25
CMTM3-206ENST00000563672 MT1LQ93083 61 aa7.24□□□□□ -1.25
CMTM3-206ENST00000563672 RPS28P62857 69 aaKnown RBP7.22□□□□□ -1.25
CMTM3-206ENST00000563672 PP632Q6XCG6 107 aa7.2□□□□□ -1.26
CMTM3-206ENST00000563672 KRTAP25-1Q3LHN0 102 aa7.16□□□□□ -1.26
CMTM3-206ENST00000563672 MT1MQ8N339 61 aa7.16□□□□□ -1.26
CMTM3-206ENST00000563672 A6NED7 52 aa7.14□□□□□ -1.27
CMTM3-206ENST00000563672 KRTAP12-3P60328 96 aa7.11□□□□□ -1.27
CMTM3-206ENST00000563672 KRTAP4-3Q9BYR4 195 aa6.99□□□□□ -1.29
CMTM3-206ENST00000563672 KRTAP23-1A1A580 65 aa6.93□□□□□ -1.3
CMTM3-206ENST00000563672 KRTAP4-7Q9BYR0 210 aa6.9□□□□□ -1.3
CMTM3-206ENST00000563672 CDC42SE1Q9NRR8 79 aa6.88□□□□□ -1.31
CMTM3-206ENST00000563672 KRTAP4-9Q9BYQ8 210 aa6.87□□□□□ -1.31
CMTM3-206ENST00000563672 ROMO1P60602 79 aa6.81□□□□□ -1.32
CMTM3-206ENST00000563672 LCE4AQ5TA78 99 aa6.81□□□□□ -1.32
CMTM3-206ENST00000563672 KRTAP19-4Q3LI73 84 aa6.75□□□□□ -1.33
CMTM3-206ENST00000563672 LCE1DQ5T752 114 aa6.75□□□□□ -1.33
CMTM3-206ENST00000563672 KRTAP5-4Q6L8H1 288 aa6.74□□□□□ -1.33
CMTM3-206ENST00000563672 HMCN1Q96RW7 5635 aa6.71□□□□□ -1.33
CMTM3-206ENST00000563672 KRTAP15-1Q3LI76 137 aa6.71□□□□□ -1.34
CMTM3-206ENST00000563672 MT4P47944 62 aa6.67□□□□□ -1.34
CMTM3-206ENST00000563672 GPR98Q8WXG9 6306 aa6.62□□□□□ -1.35
CMTM3-206ENST00000563672 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
CMTM3-206ENST00000563672 LCE3CQ5T5A8 94 aa6.57□□□□□ -1.36
CMTM3-206ENST00000563672 KRTAP4-6Q9BYQ5 205 aa6.54□□□□□ -1.36
CMTM3-206ENST00000563672 LOC100996750A0A140TA64 210 aa6.52□□□□□ -1.37
CMTM3-206ENST00000563672 AHNAK2Q8IVF2 5795 aa6.41□□□□□ -1.38
CMTM3-206ENST00000563672 SPRR5A0A1B0GTR4 108 aa6.33□□□□□ -1.4
CMTM3-206ENST00000563672 KRTAP20-2Q3LI61 65 aa6.33□□□□□ -1.4
CMTM3-206ENST00000563672 SYNE1Q8NF91 8797 aaKnown RBP6.33□□□□□ -1.4
CMTM3-206ENST00000563672 KRTAP12-4P60329 112 aa6.32□□□□□ -1.4
CMTM3-206ENST00000563672 BRK1Q8WUW1 75 aa6.31□□□□□ -1.4
CMTM3-206ENST00000563672 KRTAP9-6A8MVA2 160 aa6.22□□□□□ -1.41
CMTM3-206ENST00000563672 KRTAP5-10Q6L8G5 202 aa6.18□□□□□ -1.42
CMTM3-206ENST00000563672 MT1AP04731 61 aa6.16□□□□□ -1.42
CMTM3-206ENST00000563672 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
CMTM3-206ENST00000563672 KRTAP6-1Q3LI64 71 aa6.11□□□□□ -1.43
CMTM3-206ENST00000563672 PMAIP1Q13794 54 aa5.95□□□□□ -1.46
CMTM3-206ENST00000563672 KRTAP5-2Q701N4 177 aa5.94□□□□□ -1.46
CMTM3-206ENST00000563672 KRTAP9-4Q9BYQ2 154 aa5.94□□□□□ -1.46
CMTM3-206ENST00000563672 KRTAP5-7Q6L8G8 165 aa5.91□□□□□ -1.46
CMTM3-206ENST00000563672 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
CMTM3-206ENST00000563672 KRTAP4-11Q9BYQ6 195 aa5.73□□□□□ -1.49
CMTM3-206ENST00000563672 PRAC1Q96KF2 57 aa5.7□□□□□ -1.5
CMTM3-206ENST00000563672 PRO0628Q9UI54 55 aa5.64□□□□□ -1.51
CMTM3-206ENST00000563672 MT3P25713 68 aa5.63□□□□□ -1.51
CMTM3-206ENST00000563672 OBSCNQ5VST9 7968 aa5.55□□□□□ -1.52
CMTM3-206ENST00000563672 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
CMTM3-206ENST00000563672 H3BS24 57 aa5.4□□□□□ -1.54
CMTM3-206ENST00000563672 KTN1-AS1Q86SY8 53 aa5.35□□□□□ -1.55
CMTM3-206ENST00000563672 MUC5ACP98088 5654 aa5.29□□□□□ -1.56
CMTM3-206ENST00000563672 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
CMTM3-206ENST00000563672 MUC5BQ9HC84 5762 aaPredicted RBP5.27□□□□□ -1.57
CMTM3-206ENST00000563672 AHNAKQ09666 5890 aaKnown RBP5.27□□□□□ -1.57
CMTM3-206ENST00000563672 KRTAP9-9Q9BYP9 154 aa5.2□□□□□ -1.58
CMTM3-206ENST00000563672 LCE1EQ5T753 118 aa5.14□□□□□ -1.59
CMTM3-206ENST00000563672 SVIPQ8NHG7 77 aa5.08□□□□□ -1.6
CMTM3-206ENST00000563672 KRTAP4-2Q9BYR5 136 aa4.84□□□□□ -1.63
CMTM3-206ENST00000563672 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
CMTM3-206ENST00000563672 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
CMTM3-206ENST00000563672 LCE3DQ9BYE3 92 aa4.77□□□□□ -1.65
CMTM3-206ENST00000563672 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
CMTM3-206ENST00000563672 KRTAP4-12Q9BQ66 201 aa4.67□□□□□ -1.66
CMTM3-206ENST00000563672 LCE3EQ5T5B0 92 aa4.52□□□□□ -1.69
CMTM3-206ENST00000563672 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.37□□□□□ -1.71
CMTM3-206ENST00000563672 KRTAP5-11Q6L8G4 156 aa4.29□□□□□ -1.72
CMTM3-206ENST00000563672 LCE1FQ5T754 118 aa4.13□□□□□ -1.75
CMTM3-206ENST00000563672 KRTAP21-2Q3LI59 83 aa4.04□□□□□ -1.76
CMTM3-206ENST00000563672 NDUFAF8A1L188 74 aa3.98□□□□□ -1.77
CMTM3-206ENST00000563672 A0A0A0MQY5 61 aa3.71□□□□□ -1.82
CMTM3-206ENST00000563672 PHGR1C9JFL3 82 aa3.71□□□□□ -1.82
CMTM3-206ENST00000563672 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
CMTM3-206ENST00000563672 PRM1P04553 51 aa3.48□□□□□ -1.85
CMTM3-206ENST00000563672 MUC19Q7Z5P9 8384 aa3.42□□□□□ -1.86
CMTM3-206ENST00000563672 INE1O15225 51 aa3.31□□□□□ -1.88
CMTM3-206ENST00000563672 KRTAP21-1Q3LI58 79 aa2.72□□□□□ -1.97
CMTM3-206ENST00000563672 MUC16Q8WXI7 14507 aa2.46□□□□□ -2.01
Retrieved 78 of 20,778 RNA–protein pairs in 131.5 ms