RNA–Protein interactions for RNA: ENST00000563651.5

MSLN-204, Transcript of mesothelin, humanhuman

TSL 5

Gene MSLN, Length 1,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-204ENST00000563651 C10orf95Q9H7T3 257 aa6.9□□□□□ -1.3
MSLN-204ENST00000563651 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
MSLN-204ENST00000563651 PRR15LQ9BU68 103 aa6.88□□□□□ -1.31
MSLN-204ENST00000563651 LINC01558Q9Y6Z2 57 aa6.82□□□□□ -1.32
MSLN-204ENST00000563651 HMCN1Q96RW7 5635 aa6.77□□□□□ -1.33
MSLN-204ENST00000563651 KRTAP5-4Q6L8H1 288 aa6.75□□□□□ -1.33
MSLN-204ENST00000563651 KRTAP4-3Q9BYR4 195 aa6.75□□□□□ -1.33
MSLN-204ENST00000563651 PSPHP1O15172 72 aa6.69□□□□□ -1.34
MSLN-204ENST00000563651 KRTAP12-3P60328 96 aa6.67□□□□□ -1.34
MSLN-204ENST00000563651 V9GYY9 64 aa6.67□□□□□ -1.34
MSLN-204ENST00000563651 Q1T7F1 81 aa6.64□□□□□ -1.35
MSLN-204ENST00000563651 RPS28P62857 69 aaKnown RBP6.63□□□□□ -1.35
MSLN-204ENST00000563651 KRTAP4-6Q9BYQ5 205 aa6.63□□□□□ -1.35
MSLN-204ENST00000563651 UQCR11O14957 56 aa6.6□□□□□ -1.35
MSLN-204ENST00000563651 KRTAP5-10Q6L8G5 202 aa6.57□□□□□ -1.36
MSLN-204ENST00000563651 AHNAK2Q8IVF2 5795 aa6.56□□□□□ -1.36
MSLN-204ENST00000563651 KRTAP4-7Q9BYR0 210 aa6.54□□□□□ -1.36
MSLN-204ENST00000563651 MIR22HGQ0VDD5 57 aa6.52□□□□□ -1.37
MSLN-204ENST00000563651 KRTAP25-1Q3LHN0 102 aa6.49□□□□□ -1.37
MSLN-204ENST00000563651 A6NED7 52 aa6.47□□□□□ -1.37
MSLN-204ENST00000563651 K7ERS5 55 aa6.45□□□□□ -1.38
MSLN-204ENST00000563651 SPRR5A0A1B0GTR4 108 aa6.41□□□□□ -1.38
MSLN-204ENST00000563651 KRTAP12-4P60329 112 aa6.41□□□□□ -1.38
MSLN-204ENST00000563651 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.38
MSLN-204ENST00000563651 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
MSLN-204ENST00000563651 KRTAP5-3Q6L8H2 238 aa6.39□□□□□ -1.39
MSLN-204ENST00000563651 KRTAP5-5Q701N2 237 aaPredicted RBP6.38□□□□□ -1.39
MSLN-204ENST00000563651 KRTAP5-7Q6L8G8 165 aa6.36□□□□□ -1.39
MSLN-204ENST00000563651 KRTAP23-1A1A580 65 aa6.23□□□□□ -1.41
MSLN-204ENST00000563651 LOC100996750A0A140TA64 210 aa6.21□□□□□ -1.42
MSLN-204ENST00000563651 CDC42SE1Q9NRR8 79 aa6.21□□□□□ -1.42
MSLN-204ENST00000563651 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
MSLN-204ENST00000563651 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
MSLN-204ENST00000563651 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
MSLN-204ENST00000563651 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
MSLN-204ENST00000563651 ROMO1P60602 79 aa5.95□□□□□ -1.46
MSLN-204ENST00000563651 MT1AP04731 61 aa5.94□□□□□ -1.46
MSLN-204ENST00000563651 KRTAP4-11Q9BYQ6 195 aa5.91□□□□□ -1.46
MSLN-204ENST00000563651 KRTAP6-1Q3LI64 71 aa5.87□□□□□ -1.47
MSLN-204ENST00000563651 KRTAP5-2Q701N4 177 aa5.87□□□□□ -1.47
MSLN-204ENST00000563651 KRTAP9-4Q9BYQ2 154 aa5.76□□□□□ -1.49
MSLN-204ENST00000563651 PMAIP1Q13794 54 aa5.68□□□□□ -1.5
MSLN-204ENST00000563651 KRTAP5-8O75690 187 aa5.67□□□□□ -1.5
MSLN-204ENST00000563651 KRTAP6-2Q3LI66 62 aa5.67□□□□□ -1.5
MSLN-204ENST00000563651 KRTAP9-6A8MVA2 160 aa5.65□□□□□ -1.5
MSLN-204ENST00000563651 PRO0628Q9UI54 55 aa5.57□□□□□ -1.52
MSLN-204ENST00000563651 KRTAP9-9Q9BYP9 154 aa5.52□□□□□ -1.53
MSLN-204ENST00000563651 MUC5ACP98088 5654 aa5.51□□□□□ -1.53
MSLN-204ENST00000563651 MT3P25713 68 aa5.49□□□□□ -1.53
MSLN-204ENST00000563651 AHNAKQ09666 5890 aaKnown RBP5.49□□□□□ -1.53
MSLN-204ENST00000563651 OBSCNQ5VST9 7968 aa5.47□□□□□ -1.53
MSLN-204ENST00000563651 PRAC1Q96KF2 57 aa5.44□□□□□ -1.54
MSLN-204ENST00000563651 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
MSLN-204ENST00000563651 KRTAP5-1Q6L8H4 278 aa5.29□□□□□ -1.56
MSLN-204ENST00000563651 KTN1-AS1Q86SY8 53 aa5.26□□□□□ -1.57
MSLN-204ENST00000563651 SVIPQ8NHG7 77 aa5.12□□□□□ -1.59
MSLN-204ENST00000563651 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
MSLN-204ENST00000563651 LCE1BQ5T7P3 118 aa4.79□□□□□ -1.64
MSLN-204ENST00000563651 KRTAP4-2Q9BYR5 136 aa4.73□□□□□ -1.65
MSLN-204ENST00000563651 LCE1CQ5T751 118 aa4.7□□□□□ -1.66
MSLN-204ENST00000563651 LUZP6Q538Z0 58 aa4.46□□□□□ -1.7
MSLN-204ENST00000563651 LCE3DQ9BYE3 92 aa4.4□□□□□ -1.71
MSLN-204ENST00000563651 KRTAP4-12Q9BQ66 201 aa4.36□□□□□ -1.71
MSLN-204ENST00000563651 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
MSLN-204ENST00000563651 LCE1FQ5T754 118 aa4.24□□□□□ -1.73
MSLN-204ENST00000563651 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
MSLN-204ENST00000563651 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
MSLN-204ENST00000563651 NDUFAF8A1L188 74 aa4.05□□□□□ -1.76
MSLN-204ENST00000563651 PHGR1C9JFL3 82 aa3.88□□□□□ -1.79
MSLN-204ENST00000563651 KRTAP21-2Q3LI59 83 aa3.86□□□□□ -1.79
MSLN-204ENST00000563651 KRTAP4-4Q9BYR3 166 aa3.55□□□□□ -1.84
MSLN-204ENST00000563651 A0A0A0MQY5 61 aa3.39□□□□□ -1.87
MSLN-204ENST00000563651 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
MSLN-204ENST00000563651 INE1O15225 51 aa3.22□□□□□ -1.89
MSLN-204ENST00000563651 PRM1P04553 51 aa3.11□□□□□ -1.91
MSLN-204ENST00000563651 H3BS24 57 aa3.1□□□□□ -1.91
MSLN-204ENST00000563651 KRTAP21-1Q3LI58 79 aa2.98□□□□□ -1.93
MSLN-204ENST00000563651 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 78 of 20,778 RNA–protein pairs in 66.6 ms