RNA–Protein interactions for RNA: ENST00000563505.5

STUB1-202, Transcript of STIP1 homology and U-box containing protein 1, humanhuman

TSL 2

Gene STUB1, Length 894 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STUB1-202ENST00000563505 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
STUB1-202ENST00000563505 MT4P47944 62 aa8.47□□□□□ -1.05
STUB1-202ENST00000563505 HMCN1Q96RW7 5635 aa8.42□□□□□ -1.06
STUB1-202ENST00000563505 KRTAP4-3Q9BYR4 195 aa8.41□□□□□ -1.06
STUB1-202ENST00000563505 KRTAP5-4Q6L8H1 288 aa8.3□□□□□ -1.08
STUB1-202ENST00000563505 UQCR11O14957 56 aa8.27□□□□□ -1.09
STUB1-202ENST00000563505 TMEM258P61165 79 aa8.27□□□□□ -1.09
STUB1-202ENST00000563505 KRTAP12-3P60328 96 aa8.25□□□□□ -1.09
STUB1-202ENST00000563505 AHNAK2Q8IVF2 5795 aa8.24□□□□□ -1.09
STUB1-202ENST00000563505 KRTAP5-10Q6L8G5 202 aa8.2□□□□□ -1.1
STUB1-202ENST00000563505 KRTAP4-6Q9BYQ5 205 aa8.19□□□□□ -1.1
STUB1-202ENST00000563505 KRTAP4-7Q9BYR0 210 aa8.19□□□□□ -1.1
STUB1-202ENST00000563505 MIR22HGQ0VDD5 57 aa8.08□□□□□ -1.12
STUB1-202ENST00000563505 KRTAP25-1Q3LHN0 102 aa8.04□□□□□ -1.12
STUB1-202ENST00000563505 KRTAP5-7Q6L8G8 165 aa7.95□□□□□ -1.14
STUB1-202ENST00000563505 KRTAP5-3Q6L8H2 238 aa7.93□□□□□ -1.14
STUB1-202ENST00000563505 KRTAP5-5Q701N2 237 aaPredicted RBP7.92□□□□□ -1.14
STUB1-202ENST00000563505 K7ERS5 55 aa7.89□□□□□ -1.15
STUB1-202ENST00000563505 PSPHP1O15172 72 aa7.86□□□□□ -1.15
STUB1-202ENST00000563505 KRTAP20-2Q3LI61 65 aa7.86□□□□□ -1.15
STUB1-202ENST00000563505 V9GYY9 64 aa7.85□□□□□ -1.15
STUB1-202ENST00000563505 Q1T7F1 81 aa7.83□□□□□ -1.16
STUB1-202ENST00000563505 SPRR5A0A1B0GTR4 108 aa7.81□□□□□ -1.16
STUB1-202ENST00000563505 KRTAP19-4Q3LI73 84 aa7.79□□□□□ -1.16
STUB1-202ENST00000563505 KRTAP23-1A1A580 65 aa7.77□□□□□ -1.17
STUB1-202ENST00000563505 LOC100996750A0A140TA64 210 aa7.76□□□□□ -1.17
STUB1-202ENST00000563505 SYNE1Q8NF91 8797 aaKnown RBP7.76□□□□□ -1.17
STUB1-202ENST00000563505 KRTAP12-4P60329 112 aa7.73□□□□□ -1.17
STUB1-202ENST00000563505 KRTAP15-1Q3LI76 137 aa7.68□□□□□ -1.18
STUB1-202ENST00000563505 LCE3CQ5T5A8 94 aa7.6□□□□□ -1.19
STUB1-202ENST00000563505 A6NED7 52 aa7.56□□□□□ -1.2
STUB1-202ENST00000563505 CDC42SE1Q9NRR8 79 aa7.48□□□□□ -1.21
STUB1-202ENST00000563505 ROMO1P60602 79 aa7.39□□□□□ -1.23
STUB1-202ENST00000563505 MT1AP04731 61 aa7.32□□□□□ -1.24
STUB1-202ENST00000563505 RPS28P62857 69 aaKnown RBP7.32□□□□□ -1.24
STUB1-202ENST00000563505 KRTAP6-1Q3LI64 71 aa7.29□□□□□ -1.24
STUB1-202ENST00000563505 KRTAP4-11Q9BYQ6 195 aa7.27□□□□□ -1.25
STUB1-202ENST00000563505 KRTAP5-2Q701N4 177 aa7.24□□□□□ -1.25
STUB1-202ENST00000563505 KRTAP9-6A8MVA2 160 aa7.21□□□□□ -1.26
STUB1-202ENST00000563505 KRTAP9-4Q9BYQ2 154 aa7.09□□□□□ -1.27
STUB1-202ENST00000563505 KRTAP5-8O75690 187 aa7.03□□□□□ -1.28
STUB1-202ENST00000563505 PCP4P48539 62 aa7.01□□□□□ -1.29
STUB1-202ENST00000563505 KRTAP6-2Q3LI66 62 aa6.97□□□□□ -1.29
STUB1-202ENST00000563505 MUC5ACP98088 5654 aa6.85□□□□□ -1.31
STUB1-202ENST00000563505 OBSCNQ5VST9 7968 aa6.84□□□□□ -1.31
STUB1-202ENST00000563505 AHNAKQ09666 5890 aaKnown RBP6.84□□□□□ -1.31
STUB1-202ENST00000563505 MUC5BQ9HC84 5762 aaPredicted RBP6.84□□□□□ -1.32
STUB1-202ENST00000563505 KRTAP9-9Q9BYP9 154 aa6.76□□□□□ -1.33
STUB1-202ENST00000563505 MT3P25713 68 aa6.69□□□□□ -1.34
STUB1-202ENST00000563505 KRTAP5-1Q6L8H4 278 aa6.53□□□□□ -1.36
STUB1-202ENST00000563505 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
STUB1-202ENST00000563505 LCE1EQ5T753 118 aa6.19□□□□□ -1.42
STUB1-202ENST00000563505 PMAIP1Q13794 54 aa5.93□□□□□ -1.46
STUB1-202ENST00000563505 KRTAP4-2Q9BYR5 136 aa5.87□□□□□ -1.47
STUB1-202ENST00000563505 PRAC1Q96KF2 57 aa5.8□□□□□ -1.48
STUB1-202ENST00000563505 LCE1BQ5T7P3 118 aa5.79□□□□□ -1.48
STUB1-202ENST00000563505 LCE1CQ5T751 118 aa5.75□□□□□ -1.49
STUB1-202ENST00000563505 SVIPQ8NHG7 77 aa5.62□□□□□ -1.51
STUB1-202ENST00000563505 H3BS24 57 aa5.5□□□□□ -1.53
STUB1-202ENST00000563505 LCE3DQ9BYE3 92 aa5.44□□□□□ -1.54
STUB1-202ENST00000563505 KRTAP4-12Q9BQ66 201 aa5.39□□□□□ -1.55
STUB1-202ENST00000563505 PRO0628Q9UI54 55 aa5.33□□□□□ -1.56
STUB1-202ENST00000563505 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.23□□□□□ -1.57
STUB1-202ENST00000563505 KRTAP5-11Q6L8G4 156 aa5.2□□□□□ -1.58
STUB1-202ENST00000563505 LCE1FQ5T754 118 aa5.16□□□□□ -1.58
STUB1-202ENST00000563505 KTN1-AS1Q86SY8 53 aa5.15□□□□□ -1.59
STUB1-202ENST00000563505 LCE3EQ5T5B0 92 aa5.11□□□□□ -1.59
STUB1-202ENST00000563505 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
STUB1-202ENST00000563505 KRTAP21-2Q3LI59 83 aa4.83□□□□□ -1.64
STUB1-202ENST00000563505 PHGR1C9JFL3 82 aa4.8□□□□□ -1.64
STUB1-202ENST00000563505 A0A0A0MQY5 61 aa4.46□□□□□ -1.7
STUB1-202ENST00000563505 KRTAP4-4Q9BYR3 166 aa4.4□□□□□ -1.71
STUB1-202ENST00000563505 MUC19Q7Z5P9 8384 aa4.24□□□□□ -1.73
STUB1-202ENST00000563505 PRM1P04553 51 aa3.77□□□□□ -1.81
STUB1-202ENST00000563505 NDUFAF8A1L188 74 aa3.71□□□□□ -1.82
STUB1-202ENST00000563505 KRTAP21-1Q3LI58 79 aa3.66□□□□□ -1.82
STUB1-202ENST00000563505 MUC16Q8WXI7 14507 aa3.02□□□□□ -1.93
STUB1-202ENST00000563505 INE1O15225 51 aa2.98□□□□□ -1.93
Retrieved 78 of 20,778 RNA–protein pairs in 120.2 ms