RNA–Protein interactions for RNA: ENST00000563418.2

CLK3-212, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 10,498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-212ENST00000563418 EPPK1P58107 5090 aaKnown RBP1.88□□□□□ -2.11
CLK3-212ENST00000563418 KRTAP19-2Q3LHN2 52 aa1.87□□□□□ -2.11
CLK3-212ENST00000563418 KRTAP19-3Q7Z4W3 81 aa1.85□□□□□ -2.11
CLK3-212ENST00000563418 KRTAP9-3Q9BYQ3 159 aa1.84□□□□□ -2.11
CLK3-212ENST00000563418 MUC17Q685J3 4493 aa1.84□□□□□ -2.12
CLK3-212ENST00000563418 KRTAP4-8A0A0G2JLE6 195 aa1.82□□□□□ -2.12
CLK3-212ENST00000563418 KRTAP4-8Q9BYQ9 185 aa1.82□□□□□ -2.12
CLK3-212ENST00000563418 KRTAP4-7Q9BYR0 210 aa1.81□□□□□ -2.12
CLK3-212ENST00000563418 HMCN2Q8NDA2 5059 aa1.81□□□□□ -2.12
CLK3-212ENST00000563418 LRP2P98164 4655 aa1.81□□□□□ -2.12
CLK3-212ENST00000563418 MT1MQ8N339 61 aa1.79□□□□□ -2.12
CLK3-212ENST00000563418 KRTAP9-6A8MVA2 160 aa1.78□□□□□ -2.12
CLK3-212ENST00000563418 MT4P47944 62 aa1.77□□□□□ -2.13
CLK3-212ENST00000563418 LPAP08519 4548 aa1.77□□□□□ -2.13
CLK3-212ENST00000563418 KRTAP19-7Q3SYF9 63 aa1.76□□□□□ -2.13
CLK3-212ENST00000563418 KRTAP6-2Q3LI66 62 aa1.74□□□□□ -2.13
CLK3-212ENST00000563418 KRTAP9-1A8MXZ3 250 aaPredicted RBP1.73□□□□□ -2.13
CLK3-212ENST00000563418 GPR98Q8WXG9 6306 aa1.73□□□□□ -2.13
CLK3-212ENST00000563418 KRTAP2-2Q9BYT5 123 aa1.72□□□□□ -2.13
CLK3-212ENST00000563418 KRTAP6-3Q3LI67 103 aa1.72□□□□□ -2.13
CLK3-212ENST00000563418 LCE2AQ5TA79 106 aaPredicted RBP1.72□□□□□ -2.13
CLK3-212ENST00000563418 LOC100996750A0A140TA64 210 aa1.71□□□□□ -2.14
CLK3-212ENST00000563418 USH2AO75445 5202 aa1.7□□□□□ -2.14
CLK3-212ENST00000563418 KRTAP19-6Q3LI70 58 aa1.69□□□□□ -2.14
CLK3-212ENST00000563418 MUC2Q02817 5179 aa1.69□□□□□ -2.14
CLK3-212ENST00000563418 SSPOA2VEC9 5147 aa1.67□□□□□ -2.14
CLK3-212ENST00000563418 FAT4Q6V0I7 4981 aa1.66□□□□□ -2.14
CLK3-212ENST00000563418 LCE1AQ5T7P2 110 aa1.64□□□□□ -2.15
CLK3-212ENST00000563418 KRTAP4-9Q9BYQ8 210 aa1.64□□□□□ -2.15
CLK3-212ENST00000563418 SYNE1Q8NF91 8797 aaKnown RBP1.62□□□□□ -2.15
CLK3-212ENST00000563418 SYNE2Q8WXH0 6885 aaKnown RBP1.62□□□□□ -2.15
CLK3-212ENST00000563418 KRTAP4-3Q9BYR4 195 aa1.61□□□□□ -2.15
CLK3-212ENST00000563418 LCE4AQ5TA78 99 aa1.6□□□□□ -2.15
CLK3-212ENST00000563418 MUC12Q9UKN1 5478 aa1.59□□□□□ -2.15
CLK3-212ENST00000563418 LCE5AQ5TCM9 118 aa1.58□□□□□ -2.16
CLK3-212ENST00000563418 FSIP2Q5CZC0 6907 aa1.58□□□□□ -2.16
CLK3-212ENST00000563418 KRTAP6-1Q3LI64 71 aa1.57□□□□□ -2.16
CLK3-212ENST00000563418 KRTAP9-4Q9BYQ2 154 aa1.57□□□□□ -2.16
CLK3-212ENST00000563418 LCE1BQ5T7P3 118 aa1.55□□□□□ -2.16
CLK3-212ENST00000563418 MDN1Q9NU22 5596 aa1.53□□□□□ -2.16
CLK3-212ENST00000563418 KRTAP9-9Q9BYP9 154 aa1.53□□□□□ -2.16
CLK3-212ENST00000563418 LCE1DQ5T752 114 aa1.52□□□□□ -2.17
CLK3-212ENST00000563418 MACF1Q9UPN3 7388 aaKnown RBP1.52□□□□□ -2.17
CLK3-212ENST00000563418 NEBP20929 6669 aa1.51□□□□□ -2.17
CLK3-212ENST00000563418 LCE1EQ5T753 118 aa1.51□□□□□ -2.17
CLK3-212ENST00000563418 LCE1CQ5T751 118 aa1.48□□□□□ -2.17
CLK3-212ENST00000563418 LCE1FQ5T754 118 aa1.48□□□□□ -2.17
CLK3-212ENST00000563418 KRTAP5-5Q701N2 237 aaPredicted RBP1.48□□□□□ -2.17
CLK3-212ENST00000563418 KMT2DO14686 5537 aa1.45□□□□□ -2.18
CLK3-212ENST00000563418 AHNAK2Q8IVF2 5795 aa1.44□□□□□ -2.18
CLK3-212ENST00000563418 FCGBPQ9Y6R7 5405 aaPredicted RBP1.43□□□□□ -2.18
CLK3-212ENST00000563418 AHNAKQ09666 5890 aaKnown RBP1.41□□□□□ -2.18
CLK3-212ENST00000563418 KRTAP4-11Q9BYQ6 195 aa1.37□□□□□ -2.19
CLK3-212ENST00000563418 KRTAP4-6Q9BYQ5 205 aa1.36□□□□□ -2.19
CLK3-212ENST00000563418 OBSCNQ5VST9 7968 aa1.35□□□□□ -2.19
CLK3-212ENST00000563418 DSTQ03001 7570 aaKnown RBP1.35□□□□□ -2.19
CLK3-212ENST00000563418 MUC5BQ9HC84 5762 aaPredicted RBP1.3□□□□□ -2.2
CLK3-212ENST00000563418 HMCN1Q96RW7 5635 aa1.26□□□□□ -2.21
CLK3-212ENST00000563418 KRTAP5-9P26371 169 aa1.24□□□□□ -2.21
CLK3-212ENST00000563418 KRTAP4-2Q9BYR5 136 aa1.23□□□□□ -2.21
CLK3-212ENST00000563418 KRTAP4-12Q9BQ66 201 aa1.23□□□□□ -2.21
CLK3-212ENST00000563418 MUC19Q7Z5P9 8384 aa1.16□□□□□ -2.22
CLK3-212ENST00000563418 KRTAP20-2Q3LI61 65 aa1.15□□□□□ -2.23
CLK3-212ENST00000563418 KRTAP5-4Q6L8H1 288 aa1.14□□□□□ -2.23
CLK3-212ENST00000563418 KRTAP5-3Q6L8H2 238 aa1.14□□□□□ -2.23
CLK3-212ENST00000563418 KRTAP5-10Q6L8G5 202 aa1.11□□□□□ -2.23
CLK3-212ENST00000563418 MUC5ACP98088 5654 aa1.08□□□□□ -2.24
CLK3-212ENST00000563418 PHGR1C9JFL3 82 aa1.07□□□□□ -2.24
CLK3-212ENST00000563418 KRTAP21-1Q3LI58 79 aa1.06□□□□□ -2.24
CLK3-212ENST00000563418 KRTAP4-4Q9BYR3 166 aa1□□□□□ -2.25
CLK3-212ENST00000563418 KRTAP5-7Q6L8G8 165 aa0.97□□□□□ -2.25
CLK3-212ENST00000563418 KRTAP5-8O75690 187 aa0.97□□□□□ -2.25
CLK3-212ENST00000563418 KRTAP5-2Q701N4 177 aa0.96□□□□□ -2.26
CLK3-212ENST00000563418 KRTAP5-1Q6L8H4 278 aa0.93□□□□□ -2.26
CLK3-212ENST00000563418 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.88□□□□□ -2.27
CLK3-212ENST00000563418 KRTAP21-2Q3LI59 83 aa0.87□□□□□ -2.27
CLK3-212ENST00000563418 KRTAP5-11Q6L8G4 156 aa0.86□□□□□ -2.27
CLK3-212ENST00000563418 MUC16Q8WXI7 14507 aa0.64□□□□□ -2.31
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms