RNA–Protein interactions for RNA: ENST00000563367.1

NME3-203, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 3

Gene NME3, Length 891 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-203ENST00000563367 Q1T7F1 81 aa10.03□□□□□ -0.8
NME3-203ENST00000563367 PP632Q6XCG6 107 aa10.03□□□□□ -0.8
NME3-203ENST00000563367 MT1MQ8N339 61 aa10.01□□□□□ -0.81
NME3-203ENST00000563367 K7ERS5 55 aa9.85□□□□□ -0.83
NME3-203ENST00000563367 KRTAP12-3P60328 96 aa9.84□□□□□ -0.83
NME3-203ENST00000563367 KRTAP4-3Q9BYR4 195 aa9.83□□□□□ -0.84
NME3-203ENST00000563367 KRTAP25-1Q3LHN0 102 aa9.8□□□□□ -0.84
NME3-203ENST00000563367 KRTAP4-9Q9BYQ8 210 aa9.76□□□□□ -0.85
NME3-203ENST00000563367 A6NED7 52 aa9.69□□□□□ -0.86
NME3-203ENST00000563367 KRTAP4-7Q9BYR0 210 aa9.65□□□□□ -0.86
NME3-203ENST00000563367 PCP4P48539 62 aa9.63□□□□□ -0.87
NME3-203ENST00000563367 RPS28P62857 69 aaKnown RBP9.62□□□□□ -0.87
NME3-203ENST00000563367 LCE1DQ5T752 114 aa9.55□□□□□ -0.88
NME3-203ENST00000563367 LCE4AQ5TA78 99 aa9.55□□□□□ -0.88
NME3-203ENST00000563367 MT4P47944 62 aa9.47□□□□□ -0.89
NME3-203ENST00000563367 KRTAP5-4Q6L8H1 288 aa9.45□□□□□ -0.9
NME3-203ENST00000563367 KRTAP23-1A1A580 65 aa9.44□□□□□ -0.9
NME3-203ENST00000563367 CDC42SE1Q9NRR8 79 aa9.37□□□□□ -0.91
NME3-203ENST00000563367 HMCN1Q96RW7 5635 aa9.33□□□□□ -0.92
NME3-203ENST00000563367 GPR98Q8WXG9 6306 aa9.32□□□□□ -0.92
NME3-203ENST00000563367 ROMO1P60602 79 aa9.27□□□□□ -0.93
NME3-203ENST00000563367 KRTAP15-1Q3LI76 137 aa9.25□□□□□ -0.93
NME3-203ENST00000563367 KRTAP4-6Q9BYQ5 205 aa9.24□□□□□ -0.93
NME3-203ENST00000563367 KRTAP19-4Q3LI73 84 aa9.22□□□□□ -0.93
NME3-203ENST00000563367 KRTAP5-5Q701N2 237 aaPredicted RBP9.17□□□□□ -0.94
NME3-203ENST00000563367 LOC100996750A0A140TA64 210 aa9.14□□□□□ -0.95
NME3-203ENST00000563367 LCE3CQ5T5A8 94 aa9.09□□□□□ -0.95
NME3-203ENST00000563367 AHNAK2Q8IVF2 5795 aa8.98□□□□□ -0.97
NME3-203ENST00000563367 KRTAP20-2Q3LI61 65 aa8.9□□□□□ -0.98
NME3-203ENST00000563367 SPRR5A0A1B0GTR4 108 aa8.85□□□□□ -0.99
NME3-203ENST00000563367 KRTAP12-4P60329 112 aa8.84□□□□□ -0.99
NME3-203ENST00000563367 KRTAP5-10Q6L8G5 202 aa8.77□□□□□ -1.01
NME3-203ENST00000563367 SYNE1Q8NF91 8797 aaKnown RBP8.76□□□□□ -1.01
NME3-203ENST00000563367 KRTAP5-3Q6L8H2 238 aa8.65□□□□□ -1.02
NME3-203ENST00000563367 KRTAP9-6A8MVA2 160 aa8.63□□□□□ -1.03
NME3-203ENST00000563367 MT1AP04731 61 aa8.57□□□□□ -1.04
NME3-203ENST00000563367 KRTAP6-1Q3LI64 71 aa8.54□□□□□ -1.04
NME3-203ENST00000563367 BRK1Q8WUW1 75 aa8.46□□□□□ -1.06
NME3-203ENST00000563367 KRTAP5-7Q6L8G8 165 aa8.4□□□□□ -1.06
NME3-203ENST00000563367 KRTAP5-2Q701N4 177 aa8.31□□□□□ -1.08
NME3-203ENST00000563367 KRTAP9-4Q9BYQ2 154 aa8.29□□□□□ -1.08
NME3-203ENST00000563367 KRTAP6-2Q3LI66 62 aa8.12□□□□□ -1.11
NME3-203ENST00000563367 KRTAP4-11Q9BYQ6 195 aa8.08□□□□□ -1.12
NME3-203ENST00000563367 PMAIP1Q13794 54 aa7.94□□□□□ -1.14
NME3-203ENST00000563367 KRTAP5-8O75690 187 aa7.82□□□□□ -1.16
NME3-203ENST00000563367 MT3P25713 68 aa7.82□□□□□ -1.16
NME3-203ENST00000563367 OBSCNQ5VST9 7968 aa7.74□□□□□ -1.17
NME3-203ENST00000563367 PRAC1Q96KF2 57 aa7.69□□□□□ -1.18
NME3-203ENST00000563367 KRTAP5-1Q6L8H4 278 aa7.43□□□□□ -1.22
NME3-203ENST00000563367 PRO0628Q9UI54 55 aa7.41□□□□□ -1.22
NME3-203ENST00000563367 KRTAP9-9Q9BYP9 154 aa7.34□□□□□ -1.23
NME3-203ENST00000563367 MUC5BQ9HC84 5762 aaPredicted RBP7.3□□□□□ -1.24
NME3-203ENST00000563367 AHNAKQ09666 5890 aaKnown RBP7.28□□□□□ -1.24
NME3-203ENST00000563367 MUC5ACP98088 5654 aa7.27□□□□□ -1.25
NME3-203ENST00000563367 LCE1EQ5T753 118 aa7.13□□□□□ -1.27
NME3-203ENST00000563367 KTN1-AS1Q86SY8 53 aa7.08□□□□□ -1.28
NME3-203ENST00000563367 SVIPQ8NHG7 77 aa6.79□□□□□ -1.32
NME3-203ENST00000563367 KRTAP4-2Q9BYR5 136 aa6.77□□□□□ -1.33
NME3-203ENST00000563367 LCE1BQ5T7P3 118 aa6.73□□□□□ -1.33
NME3-203ENST00000563367 LCE1CQ5T751 118 aa6.63□□□□□ -1.35
NME3-203ENST00000563367 LCE3DQ9BYE3 92 aa6.57□□□□□ -1.36
NME3-203ENST00000563367 LUZP6Q538Z0 58 aa6.38□□□□□ -1.39
NME3-203ENST00000563367 LCE3EQ5T5B0 92 aa6.21□□□□□ -1.42
NME3-203ENST00000563367 KRTAP4-12Q9BQ66 201 aa6.09□□□□□ -1.43
NME3-203ENST00000563367 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.06□□□□□ -1.44
NME3-203ENST00000563367 KRTAP5-11Q6L8G4 156 aa5.99□□□□□ -1.45
NME3-203ENST00000563367 LCE1FQ5T754 118 aa5.76□□□□□ -1.49
NME3-203ENST00000563367 KRTAP21-2Q3LI59 83 aa5.63□□□□□ -1.51
NME3-203ENST00000563367 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
NME3-203ENST00000563367 PHGR1C9JFL3 82 aa5.18□□□□□ -1.58
NME3-203ENST00000563367 KRTAP4-4Q9BYR3 166 aa5.16□□□□□ -1.58
NME3-203ENST00000563367 MUC19Q7Z5P9 8384 aa4.77□□□□□ -1.65
NME3-203ENST00000563367 PRM1P04553 51 aa4.77□□□□□ -1.65
NME3-203ENST00000563367 INE1O15225 51 aa4.16□□□□□ -1.74
NME3-203ENST00000563367 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
NME3-203ENST00000563367 KRTAP21-1Q3LI58 79 aa3.83□□□□□ -1.8
NME3-203ENST00000563367 H3BS24 57 aa3.77□□□□□ -1.81
NME3-203ENST00000563367 MUC16Q8WXI7 14507 aa3.35□□□□□ -1.87
Retrieved 78 of 20,778 RNA–protein pairs in 147.3 ms