RNA–Protein interactions for RNA: ENST00000563348.1

TRADD-203, Transcript of TNFRSF1A associated via death domain, humanhuman

TSL 2

Gene TRADD, Length 833 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRADD-203ENST00000563348 MT1GP13640 62 aa6.87□□□□□ -1.31
TRADD-203ENST00000563348 UQCR11O14957 56 aa6.84□□□□□ -1.31
TRADD-203ENST00000563348 LCE3AQ5TA76 89 aa6.83□□□□□ -1.32
TRADD-203ENST00000563348 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
TRADD-203ENST00000563348 MT1LQ93083 61 aa6.78□□□□□ -1.32
TRADD-203ENST00000563348 PSPHP1O15172 72 aa6.73□□□□□ -1.33
TRADD-203ENST00000563348 MT1MQ8N339 61 aa6.73□□□□□ -1.33
TRADD-203ENST00000563348 PMAIP1Q13794 54 aa6.7□□□□□ -1.34
TRADD-203ENST00000563348 MIR22HGQ0VDD5 57 aa6.68□□□□□ -1.34
TRADD-203ENST00000563348 KRTAP4-9Q9BYQ8 210 aa6.63□□□□□ -1.35
TRADD-203ENST00000563348 KRTAP12-3P60328 96 aa6.59□□□□□ -1.35
TRADD-203ENST00000563348 CDC42SE1Q9NRR8 79 aa6.58□□□□□ -1.36
TRADD-203ENST00000563348 KRTAP4-3Q9BYR4 195 aa6.57□□□□□ -1.36
TRADD-203ENST00000563348 A6NED7 52 aa6.55□□□□□ -1.36
TRADD-203ENST00000563348 K7ERS5 55 aa6.54□□□□□ -1.36
TRADD-203ENST00000563348 KRTAP25-1Q3LHN0 102 aa6.54□□□□□ -1.36
TRADD-203ENST00000563348 KTN1-AS1Q86SY8 53 aa6.52□□□□□ -1.37
TRADD-203ENST00000563348 LCE4AQ5TA78 99 aa6.51□□□□□ -1.37
TRADD-203ENST00000563348 GPR98Q8WXG9 6306 aa6.49□□□□□ -1.37
TRADD-203ENST00000563348 LCE1DQ5T752 114 aa6.47□□□□□ -1.37
TRADD-203ENST00000563348 KRTAP4-7Q9BYR0 210 aa6.44□□□□□ -1.38
TRADD-203ENST00000563348 HMCN1Q96RW7 5635 aa6.41□□□□□ -1.38
TRADD-203ENST00000563348 MT4P47944 62 aa6.41□□□□□ -1.38
TRADD-203ENST00000563348 KRTAP5-4Q6L8H1 288 aa6.41□□□□□ -1.38
TRADD-203ENST00000563348 KRTAP23-1A1A580 65 aa6.32□□□□□ -1.4
TRADD-203ENST00000563348 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
TRADD-203ENST00000563348 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
TRADD-203ENST00000563348 KRTAP15-1Q3LI76 137 aa6.18□□□□□ -1.42
TRADD-203ENST00000563348 KRTAP5-5Q701N2 237 aaPredicted RBP6.18□□□□□ -1.42
TRADD-203ENST00000563348 AHNAK2Q8IVF2 5795 aa6.16□□□□□ -1.42
TRADD-203ENST00000563348 ROMO1P60602 79 aa6.12□□□□□ -1.43
TRADD-203ENST00000563348 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
TRADD-203ENST00000563348 LCE3CQ5T5A8 94 aa6.07□□□□□ -1.44
TRADD-203ENST00000563348 PRAC1Q96KF2 57 aa6.07□□□□□ -1.44
TRADD-203ENST00000563348 SYNE1Q8NF91 8797 aaKnown RBP6.04□□□□□ -1.44
TRADD-203ENST00000563348 KRTAP20-2Q3LI61 65 aa6.03□□□□□ -1.44
TRADD-203ENST00000563348 SPRR5A0A1B0GTR4 108 aa6.02□□□□□ -1.45
TRADD-203ENST00000563348 KRTAP12-4P60329 112 aa6.01□□□□□ -1.45
TRADD-203ENST00000563348 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
TRADD-203ENST00000563348 KRTAP5-3Q6L8H2 238 aa5.88□□□□□ -1.47
TRADD-203ENST00000563348 MT1AP04731 61 aa5.77□□□□□ -1.49
TRADD-203ENST00000563348 KRTAP5-7Q6L8G8 165 aa5.76□□□□□ -1.49
TRADD-203ENST00000563348 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
TRADD-203ENST00000563348 KRTAP6-1Q3LI64 71 aa5.72□□□□□ -1.49
TRADD-203ENST00000563348 KRTAP5-2Q701N4 177 aa5.62□□□□□ -1.51
TRADD-203ENST00000563348 H3BS24 57 aa5.58□□□□□ -1.52
TRADD-203ENST00000563348 KRTAP9-4Q9BYQ2 154 aa5.58□□□□□ -1.52
TRADD-203ENST00000563348 KRTAP4-11Q9BYQ6 195 aa5.5□□□□□ -1.53
TRADD-203ENST00000563348 KRTAP6-2Q3LI66 62 aa5.46□□□□□ -1.54
TRADD-203ENST00000563348 KRTAP5-8O75690 187 aa5.31□□□□□ -1.56
TRADD-203ENST00000563348 MT3P25713 68 aa5.29□□□□□ -1.56
TRADD-203ENST00000563348 OBSCNQ5VST9 7968 aa5.29□□□□□ -1.56
TRADD-203ENST00000563348 NDUFAF8A1L188 74 aa5.16□□□□□ -1.58
TRADD-203ENST00000563348 MUC5BQ9HC84 5762 aaPredicted RBP5.12□□□□□ -1.59
TRADD-203ENST00000563348 AHNAKQ09666 5890 aaKnown RBP5.1□□□□□ -1.59
TRADD-203ENST00000563348 MUC5ACP98088 5654 aa5.05□□□□□ -1.6
TRADD-203ENST00000563348 KRTAP5-1Q6L8H4 278 aa5.03□□□□□ -1.6
TRADD-203ENST00000563348 KRTAP9-9Q9BYP9 154 aa5.02□□□□□ -1.61
TRADD-203ENST00000563348 LUZP6Q538Z0 58 aa4.86□□□□□ -1.63
TRADD-203ENST00000563348 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
TRADD-203ENST00000563348 A0A0A0MQY5 61 aa4.75□□□□□ -1.65
TRADD-203ENST00000563348 KRTAP4-2Q9BYR5 136 aa4.56□□□□□ -1.68
TRADD-203ENST00000563348 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
TRADD-203ENST00000563348 LCE1CQ5T751 118 aa4.49□□□□□ -1.69
TRADD-203ENST00000563348 LCE3DQ9BYE3 92 aa4.39□□□□□ -1.71
TRADD-203ENST00000563348 INE1O15225 51 aa4.36□□□□□ -1.71
TRADD-203ENST00000563348 LCE3EQ5T5B0 92 aa4.14□□□□□ -1.75
TRADD-203ENST00000563348 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
TRADD-203ENST00000563348 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
TRADD-203ENST00000563348 KRTAP5-11Q6L8G4 156 aa4.05□□□□□ -1.76
TRADD-203ENST00000563348 LCE1FQ5T754 118 aa3.95□□□□□ -1.78
TRADD-203ENST00000563348 KRTAP21-2Q3LI59 83 aa3.78□□□□□ -1.8
TRADD-203ENST00000563348 PHGR1C9JFL3 82 aa3.5□□□□□ -1.85
TRADD-203ENST00000563348 KRTAP4-4Q9BYR3 166 aa3.44□□□□□ -1.86
TRADD-203ENST00000563348 MUC19Q7Z5P9 8384 aa3.27□□□□□ -1.89
TRADD-203ENST00000563348 PRM1P04553 51 aa3.12□□□□□ -1.91
TRADD-203ENST00000563348 KRTAP21-1Q3LI58 79 aa2.65□□□□□ -1.99
TRADD-203ENST00000563348 MUC16Q8WXI7 14507 aa2.28□□□□□ -2.04
Retrieved 78 of 20,778 RNA–protein pairs in 520.3 ms