RNA–Protein interactions for RNA: ENST00000563047.1

GGA2-204, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 2, humanhuman

TSL 5

Gene GGA2, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA2-204ENST00000563047 KRTAP5-7Q6L8G8 165 aa7.15□□□□□ -1.26
GGA2-204ENST00000563047 KRTAP4-7Q9BYR0 210 aa7.15□□□□□ -1.26
GGA2-204ENST00000563047 KRTAP5-3Q6L8H2 238 aa7.14□□□□□ -1.27
GGA2-204ENST00000563047 A0A1B0GU69 56 aa7.07□□□□□ -1.28
GGA2-204ENST00000563047 KRTAP20-2Q3LI61 65 aa7.05□□□□□ -1.28
GGA2-204ENST00000563047 H7BZZ5 65 aa7.04□□□□□ -1.28
GGA2-204ENST00000563047 COX7CP15954 63 aa7.02□□□□□ -1.29
GGA2-204ENST00000563047 KRTAP12-3P60328 96 aa7□□□□□ -1.29
GGA2-204ENST00000563047 KRTAP5-5Q701N2 237 aaPredicted RBP6.99□□□□□ -1.29
GGA2-204ENST00000563047 SPRR5A0A1B0GTR4 108 aa6.95□□□□□ -1.3
GGA2-204ENST00000563047 KRTAP12-4P60329 112 aa6.86□□□□□ -1.31
GGA2-204ENST00000563047 LOC100996750A0A140TA64 210 aa6.79□□□□□ -1.32
GGA2-204ENST00000563047 SYNE1Q8NF91 8797 aaKnown RBP6.74□□□□□ -1.33
GGA2-204ENST00000563047 PRR15LQ9BU68 103 aa6.71□□□□□ -1.34
GGA2-204ENST00000563047 LINC01558Q9Y6Z2 57 aa6.61□□□□□ -1.35
GGA2-204ENST00000563047 KRTAP25-1Q3LHN0 102 aa6.57□□□□□ -1.36
GGA2-204ENST00000563047 KRTAP19-4Q3LI73 84 aa6.55□□□□□ -1.36
GGA2-204ENST00000563047 ANAPC13Q9BS18 74 aa6.52□□□□□ -1.37
GGA2-204ENST00000563047 KRTAP4-11Q9BYQ6 195 aa6.52□□□□□ -1.37
GGA2-204ENST00000563047 UQCR11O14957 56 aa6.51□□□□□ -1.37
GGA2-204ENST00000563047 CCDC179H3BU77 68 aa6.46□□□□□ -1.38
GGA2-204ENST00000563047 ATP5EP56381 51 aaPredicted RBP6.45□□□□□ -1.38
GGA2-204ENST00000563047 KRTAP5-2Q701N4 177 aa6.45□□□□□ -1.38
GGA2-204ENST00000563047 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
GGA2-204ENST00000563047 LCE3CQ5T5A8 94 aa6.42□□□□□ -1.38
GGA2-204ENST00000563047 KRTAP6-1Q3LI64 71 aa6.38□□□□□ -1.39
GGA2-204ENST00000563047 MT1AP04731 61 aa6.37□□□□□ -1.39
GGA2-204ENST00000563047 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
GGA2-204ENST00000563047 KRTAP5-8O75690 187 aa6.32□□□□□ -1.4
GGA2-204ENST00000563047 KRTAP23-1A1A580 65 aa6.31□□□□□ -1.4
GGA2-204ENST00000563047 K7ERS5 55 aa6.24□□□□□ -1.41
GGA2-204ENST00000563047 KRTAP9-4Q9BYQ2 154 aa6.2□□□□□ -1.42
GGA2-204ENST00000563047 MUC5ACP98088 5654 aa6.18□□□□□ -1.42
GGA2-204ENST00000563047 MUC5BQ9HC84 5762 aaPredicted RBP6.18□□□□□ -1.42
GGA2-204ENST00000563047 KRTAP6-2Q3LI66 62 aa6.16□□□□□ -1.42
GGA2-204ENST00000563047 AHNAKQ09666 5890 aaKnown RBP6.15□□□□□ -1.42
GGA2-204ENST00000563047 TMEM258P61165 79 aa6.14□□□□□ -1.43
GGA2-204ENST00000563047 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
GGA2-204ENST00000563047 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
GGA2-204ENST00000563047 KRTAP9-9Q9BYP9 154 aa6.03□□□□□ -1.44
GGA2-204ENST00000563047 PSPHP1O15172 72 aa5.99□□□□□ -1.45
GGA2-204ENST00000563047 Q1T7F1 81 aa5.9□□□□□ -1.46
GGA2-204ENST00000563047 V9GYY9 64 aa5.89□□□□□ -1.47
GGA2-204ENST00000563047 CDC42SE1Q9NRR8 79 aa5.88□□□□□ -1.47
GGA2-204ENST00000563047 RPS28P62857 69 aaKnown RBP5.87□□□□□ -1.47
GGA2-204ENST00000563047 KRTAP5-1Q6L8H4 278 aa5.87□□□□□ -1.47
GGA2-204ENST00000563047 MT3P25713 68 aa5.83□□□□□ -1.48
GGA2-204ENST00000563047 ROMO1P60602 79 aa5.77□□□□□ -1.49
GGA2-204ENST00000563047 A6NED7 52 aa5.74□□□□□ -1.49
GGA2-204ENST00000563047 LCE1EQ5T753 118 aa5.45□□□□□ -1.54
GGA2-204ENST00000563047 KRTAP4-2Q9BYR5 136 aa5.22□□□□□ -1.57
GGA2-204ENST00000563047 LCE1BQ5T7P3 118 aa5.17□□□□□ -1.58
GGA2-204ENST00000563047 LCE1CQ5T751 118 aa5.07□□□□□ -1.6
GGA2-204ENST00000563047 KRTAP4-12Q9BQ66 201 aa4.86□□□□□ -1.63
GGA2-204ENST00000563047 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
GGA2-204ENST00000563047 PCP4P48539 62 aa4.58□□□□□ -1.68
GGA2-204ENST00000563047 LCE1FQ5T754 118 aa4.57□□□□□ -1.68
GGA2-204ENST00000563047 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.57□□□□□ -1.68
GGA2-204ENST00000563047 LCE3DQ9BYE3 92 aa4.54□□□□□ -1.68
GGA2-204ENST00000563047 BRK1Q8WUW1 75 aa4.41□□□□□ -1.7
GGA2-204ENST00000563047 PHGR1C9JFL3 82 aa4.31□□□□□ -1.72
GGA2-204ENST00000563047 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
GGA2-204ENST00000563047 LCE3EQ5T5B0 92 aa4.2□□□□□ -1.74
GGA2-204ENST00000563047 PRAC1Q96KF2 57 aa4.14□□□□□ -1.75
GGA2-204ENST00000563047 PMAIP1Q13794 54 aa4.11□□□□□ -1.75
GGA2-204ENST00000563047 KRTAP4-4Q9BYR3 166 aa3.92□□□□□ -1.78
GGA2-204ENST00000563047 MUC19Q7Z5P9 8384 aa3.78□□□□□ -1.8
GGA2-204ENST00000563047 LUZP6Q538Z0 58 aa3.51□□□□□ -1.85
GGA2-204ENST00000563047 KTN1-AS1Q86SY8 53 aa3.34□□□□□ -1.87
GGA2-204ENST00000563047 PRO0628Q9UI54 55 aa3.34□□□□□ -1.87
GGA2-204ENST00000563047 SVIPQ8NHG7 77 aa3.33□□□□□ -1.88
GGA2-204ENST00000563047 KRTAP21-1Q3LI58 79 aa3.27□□□□□ -1.89
GGA2-204ENST00000563047 PRM1P04553 51 aa2.94□□□□□ -1.94
GGA2-204ENST00000563047 MUC16Q8WXI7 14507 aa2.67□□□□□ -1.98
GGA2-204ENST00000563047 H3BS24 57 aa2.31□□□□□ -2.04
GGA2-204ENST00000563047 NDUFAF8A1L188 74 aa2.3□□□□□ -2.04
GGA2-204ENST00000563047 A0A0A0MQY5 61 aa1.98□□□□□ -2.09
GGA2-204ENST00000563047 INE1O15225 51 aa1.84□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 10.4 ms