RNA–Protein interactions for RNA: ENST00000562998.1

CDH11-206, Transcript of cadherin 11, humanhuman

TSL 4

Gene CDH11, Length 568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11-206ENST00000562998 MT1LQ93083 61 aa6.67□□□□□ -1.34
CDH11-206ENST00000562998 PCP4P48539 62 aa6.65□□□□□ -1.34
CDH11-206ENST00000562998 RPS28P62857 69 aaKnown RBP6.65□□□□□ -1.34
CDH11-206ENST00000562998 DSTQ03001 7570 aaKnown RBP6.63□□□□□ -1.35
CDH11-206ENST00000562998 PP632Q6XCG6 107 aa6.6□□□□□ -1.35
CDH11-206ENST00000562998 MT1MQ8N339 61 aa6.6□□□□□ -1.35
CDH11-206ENST00000562998 K7ERS5 55 aa6.59□□□□□ -1.35
CDH11-206ENST00000562998 KRTAP25-1Q3LHN0 102 aa6.58□□□□□ -1.36
CDH11-206ENST00000562998 KRTAP12-3P60328 96 aa6.54□□□□□ -1.36
CDH11-206ENST00000562998 A6NED7 52 aa6.52□□□□□ -1.37
CDH11-206ENST00000562998 KRTAP4-3Q9BYR4 195 aa6.43□□□□□ -1.38
CDH11-206ENST00000562998 KRTAP23-1A1A580 65 aa6.39□□□□□ -1.39
CDH11-206ENST00000562998 KRTAP4-7Q9BYR0 210 aa6.35□□□□□ -1.39
CDH11-206ENST00000562998 KRTAP4-9Q9BYQ8 210 aa6.3□□□□□ -1.4
CDH11-206ENST00000562998 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
CDH11-206ENST00000562998 LCE4AQ5TA78 99 aa6.27□□□□□ -1.41
CDH11-206ENST00000562998 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
CDH11-206ENST00000562998 ROMO1P60602 79 aa6.24□□□□□ -1.41
CDH11-206ENST00000562998 KRTAP19-4Q3LI73 84 aa6.23□□□□□ -1.41
CDH11-206ENST00000562998 LCE1DQ5T752 114 aa6.21□□□□□ -1.42
CDH11-206ENST00000562998 H3BS24 57 aa6.2□□□□□ -1.42
CDH11-206ENST00000562998 GPR98Q8WXG9 6306 aa6.17□□□□□ -1.42
CDH11-206ENST00000562998 KRTAP15-1Q3LI76 137 aa6.17□□□□□ -1.42
CDH11-206ENST00000562998 HMCN1Q96RW7 5635 aa6.14□□□□□ -1.43
CDH11-206ENST00000562998 MT4P47944 62 aa6.12□□□□□ -1.43
CDH11-206ENST00000562998 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
CDH11-206ENST00000562998 LCE3CQ5T5A8 94 aa6.05□□□□□ -1.44
CDH11-206ENST00000562998 KRTAP4-6Q9BYQ5 205 aa6.03□□□□□ -1.44
CDH11-206ENST00000562998 LOC100996750A0A140TA64 210 aa6□□□□□ -1.45
CDH11-206ENST00000562998 SPRR5A0A1B0GTR4 108 aa5.84□□□□□ -1.47
CDH11-206ENST00000562998 KRTAP20-2Q3LI61 65 aa5.84□□□□□ -1.47
CDH11-206ENST00000562998 AHNAK2Q8IVF2 5795 aa5.83□□□□□ -1.48
CDH11-206ENST00000562998 KRTAP12-4P60329 112 aa5.8□□□□□ -1.48
CDH11-206ENST00000562998 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
CDH11-206ENST00000562998 BRK1Q8WUW1 75 aa5.76□□□□□ -1.49
CDH11-206ENST00000562998 KRTAP9-6A8MVA2 160 aa5.75□□□□□ -1.49
CDH11-206ENST00000562998 KRTAP5-10Q6L8G5 202 aa5.72□□□□□ -1.49
CDH11-206ENST00000562998 KRTAP5-3Q6L8H2 238 aa5.7□□□□□ -1.5
CDH11-206ENST00000562998 MT1AP04731 61 aa5.68□□□□□ -1.5
CDH11-206ENST00000562998 KRTAP6-1Q3LI64 71 aa5.64□□□□□ -1.51
CDH11-206ENST00000562998 KRTAP4-12Q9BQ66 201 aa5.54□□□□□ -1.52
CDH11-206ENST00000562998 KRTAP5-2Q701N4 177 aa5.51□□□□□ -1.53
CDH11-206ENST00000562998 A0A0A0MQY5 61 aa5.49□□□□□ -1.53
CDH11-206ENST00000562998 KRTAP9-4Q9BYQ2 154 aa5.48□□□□□ -1.53
CDH11-206ENST00000562998 KRTAP5-7Q6L8G8 165 aa5.46□□□□□ -1.54
CDH11-206ENST00000562998 PMAIP1Q13794 54 aa5.43□□□□□ -1.54
CDH11-206ENST00000562998 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
CDH11-206ENST00000562998 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
CDH11-206ENST00000562998 KRTAP9-9Q9BYP9 154 aa5.27□□□□□ -1.57
CDH11-206ENST00000562998 PRO0628Q9UI54 55 aa5.27□□□□□ -1.57
CDH11-206ENST00000562998 PRAC1Q96KF2 57 aa5.22□□□□□ -1.57
CDH11-206ENST00000562998 MT3P25713 68 aa5.17□□□□□ -1.58
CDH11-206ENST00000562998 KRTAP5-8O75690 187 aa5.13□□□□□ -1.59
CDH11-206ENST00000562998 OBSCNQ5VST9 7968 aa5.06□□□□□ -1.6
CDH11-206ENST00000562998 KTN1-AS1Q86SY8 53 aa4.92□□□□□ -1.62
CDH11-206ENST00000562998 KRTAP5-1Q6L8H4 278 aa4.9□□□□□ -1.63
CDH11-206ENST00000562998 MUC5BQ9HC84 5762 aaPredicted RBP4.78□□□□□ -1.64
CDH11-206ENST00000562998 MUC5ACP98088 5654 aa4.78□□□□□ -1.64
CDH11-206ENST00000562998 LCE1EQ5T753 118 aa4.75□□□□□ -1.65
CDH11-206ENST00000562998 AHNAKQ09666 5890 aaKnown RBP4.72□□□□□ -1.65
CDH11-206ENST00000562998 KRTAP4-2Q9BYR5 136 aa4.69□□□□□ -1.66
CDH11-206ENST00000562998 LCE1CQ5T751 118 aa4.41□□□□□ -1.7
CDH11-206ENST00000562998 LCE1BQ5T7P3 118 aa4.41□□□□□ -1.7
CDH11-206ENST00000562998 LCE3DQ9BYE3 92 aa4.37□□□□□ -1.71
CDH11-206ENST00000562998 LUZP6Q538Z0 58 aa4.32□□□□□ -1.72
CDH11-206ENST00000562998 LCE3EQ5T5B0 92 aa4.15□□□□□ -1.75
CDH11-206ENST00000562998 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.06□□□□□ -1.76
CDH11-206ENST00000562998 KRTAP5-11Q6L8G4 156 aa3.98□□□□□ -1.77
CDH11-206ENST00000562998 NDUFAF8A1L188 74 aa3.9□□□□□ -1.79
CDH11-206ENST00000562998 LCE1FQ5T754 118 aa3.82□□□□□ -1.8
CDH11-206ENST00000562998 KRTAP21-2Q3LI59 83 aa3.74□□□□□ -1.81
CDH11-206ENST00000562998 PHGR1C9JFL3 82 aa3.43□□□□□ -1.86
CDH11-206ENST00000562998 KRTAP4-4Q9BYR3 166 aa3.33□□□□□ -1.88
CDH11-206ENST00000562998 INE1O15225 51 aa3.26□□□□□ -1.89
CDH11-206ENST00000562998 PRM1P04553 51 aa3.19□□□□□ -1.9
CDH11-206ENST00000562998 MUC19Q7Z5P9 8384 aa3.08□□□□□ -1.92
CDH11-206ENST00000562998 KRTAP21-1Q3LI58 79 aa2.49□□□□□ -2.01
CDH11-206ENST00000562998 MUC16Q8WXI7 14507 aa2.27□□□□□ -2.05
Retrieved 78 of 20,778 RNA–protein pairs in 61 ms