RNA–Protein interactions for RNA: ENST00000562791.1

CHD9-206, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 242 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-206ENST00000562791 CUBNO60494 3623 aa1.61□□□□□ -2.15
CHD9-206ENST00000562791 CEP295Q9C0D2 2601 aa1.6□□□□□ -2.15
CHD9-206ENST00000562791 HERC2O95714 4834 aa1.6□□□□□ -2.15
CHD9-206ENST00000562791 ZNF469Q96JG9 3925 aaPredicted RBP1.59□□□□□ -2.15
CHD9-206ENST00000562791 PLECQ15149 4684 aaKnown RBP1.59□□□□□ -2.15
CHD9-206ENST00000562791 KRTAP8-1Q8IUC2 63 aa1.59□□□□□ -2.15
CHD9-206ENST00000562791 LRP1Q07954 4544 aaKnown RBP1.59□□□□□ -2.16
CHD9-206ENST00000562791 KRTAP2-3P0C7H8 128 aa1.58□□□□□ -2.16
CHD9-206ENST00000562791 KRTAP2-4Q9BYR9 128 aa1.58□□□□□ -2.16
CHD9-206ENST00000562791 KRTAP2-1Q9BYU5 128 aa1.58□□□□□ -2.16
CHD9-206ENST00000562791 DYNC1H1Q14204 4646 aaKnown RBP1.57□□□□□ -2.16
CHD9-206ENST00000562791 FAT4Q6V0I7 4981 aa1.55□□□□□ -2.16
CHD9-206ENST00000562791 FAT2Q9NYQ8 4349 aa1.54□□□□□ -2.16
CHD9-206ENST00000562791 M0R2T5 61 aa1.53□□□□□ -2.16
CHD9-206ENST00000562791 FSIP2Q5CZC0 6907 aa1.52□□□□□ -2.17
CHD9-206ENST00000562791 TNXBP22105 4242 aa1.51□□□□□ -2.17
CHD9-206ENST00000562791 STARD9Q9P2P6 4700 aa1.51□□□□□ -2.17
CHD9-206ENST00000562791 NSD1Q96L73 2696 aaPredicted RBP1.49□□□□□ -2.17
CHD9-206ENST00000562791 KRTAP10-4P60372 401 aaPredicted RBP1.49□□□□□ -2.17
CHD9-206ENST00000562791 NEBP20929 6669 aa1.49□□□□□ -2.17
CHD9-206ENST00000562791 SSPOA2VEC9 5147 aa1.47□□□□□ -2.17
CHD9-206ENST00000562791 TENM3Q9P273 2699 aa1.47□□□□□ -2.17
CHD9-206ENST00000562791 LPAP08519 4548 aa1.47□□□□□ -2.17
CHD9-206ENST00000562791 MACF1Q9UPN3 7388 aaKnown RBP1.46□□□□□ -2.18
CHD9-206ENST00000562791 AHNAK2Q8IVF2 5795 aa1.46□□□□□ -2.18
CHD9-206ENST00000562791 PKHD1P08F94 4074 aa1.45□□□□□ -2.18
CHD9-206ENST00000562791 MGAM2Q2M2H8 2515 aa1.45□□□□□ -2.18
CHD9-206ENST00000562791 SYNE2Q8WXH0 6885 aaKnown RBP1.45□□□□□ -2.18
CHD9-206ENST00000562791 J3QKU1 62 aa1.45□□□□□ -2.18
CHD9-206ENST00000562791 LRP1BQ9NZR2 4599 aa1.44□□□□□ -2.18
CHD9-206ENST00000562791 SMR3BP02814 79 aaPredicted RBP1.43□□□□□ -2.18
CHD9-206ENST00000562791 KRTAP20-1Q3LI63 56 aa1.43□□□□□ -2.18
CHD9-206ENST00000562791 MUC17Q685J3 4493 aa1.42□□□□□ -2.18
CHD9-206ENST00000562791 FAT1Q14517 4588 aa1.41□□□□□ -2.18
CHD9-206ENST00000562791 RNF213Q63HN8 5207 aa1.38□□□□□ -2.19
CHD9-206ENST00000562791 AHNAKQ09666 5890 aaKnown RBP1.37□□□□□ -2.19
CHD9-206ENST00000562791 KRTAP19-5Q3LI72 72 aa1.35□□□□□ -2.19
CHD9-206ENST00000562791 HMCN2Q8NDA2 5059 aa1.35□□□□□ -2.19
CHD9-206ENST00000562791 MUC5BQ9HC84 5762 aaPredicted RBP1.34□□□□□ -2.2
CHD9-206ENST00000562791 SPRR2GQ9BYE4 73 aa1.31□□□□□ -2.2
CHD9-206ENST00000562791 PRM1P04553 51 aa1.3□□□□□ -2.2
CHD9-206ENST00000562791 KMT2DO14686 5537 aa1.28□□□□□ -2.2
CHD9-206ENST00000562791 LRP2P98164 4655 aa1.26□□□□□ -2.21
CHD9-206ENST00000562791 MT1AP04731 61 aa1.25□□□□□ -2.21
CHD9-206ENST00000562791 KRTAP19-2Q3LHN2 52 aa1.23□□□□□ -2.21
CHD9-206ENST00000562791 KRTAP19-8Q3LI54 63 aa1.2□□□□□ -2.22
CHD9-206ENST00000562791 MT1XP80297 61 aa1.18□□□□□ -2.22
CHD9-206ENST00000562791 MT1EP04732 61 aa1.17□□□□□ -2.22
CHD9-206ENST00000562791 KRTAP5-10Q6L8G5 202 aa1.17□□□□□ -2.22
CHD9-206ENST00000562791 DSTQ03001 7570 aaKnown RBP1.17□□□□□ -2.22
CHD9-206ENST00000562791 MUC5ACP98088 5654 aa1.16□□□□□ -2.22
CHD9-206ENST00000562791 SYNE1Q8NF91 8797 aaKnown RBP1.16□□□□□ -2.22
CHD9-206ENST00000562791 MUC12Q9UKN1 5478 aa1.15□□□□□ -2.22
CHD9-206ENST00000562791 MDN1Q9NU22 5596 aa1.15□□□□□ -2.23
CHD9-206ENST00000562791 MUC16Q8WXI7 14507 aa1.15□□□□□ -2.23
CHD9-206ENST00000562791 MT1LQ93083 61 aa1.13□□□□□ -2.23
CHD9-206ENST00000562791 USH2AO75445 5202 aa1.13□□□□□ -2.23
CHD9-206ENST00000562791 KRTAP6-2Q3LI66 62 aa1.12□□□□□ -2.23
CHD9-206ENST00000562791 SPRR2BP35325 72 aa1.11□□□□□ -2.23
CHD9-206ENST00000562791 SPRR2AP35326 72 aa1.11□□□□□ -2.23
CHD9-206ENST00000562791 SPRR2FQ96RM1 72 aa1.11□□□□□ -2.23
CHD9-206ENST00000562791 SPRR2DP22532 72 aa1.09□□□□□ -2.23
CHD9-206ENST00000562791 MT1BP07438 61 aa1.08□□□□□ -2.24
CHD9-206ENST00000562791 MT1HL1P0DM35 61 aa1.08□□□□□ -2.24
CHD9-206ENST00000562791 KRTAP19-7Q3SYF9 63 aa1.05□□□□□ -2.24
CHD9-206ENST00000562791 SPRR2EP22531 72 aa1.04□□□□□ -2.24
CHD9-206ENST00000562791 MT1HP80294 61 aa1.02□□□□□ -2.25
CHD9-206ENST00000562791 KRTAP19-3Q7Z4W3 81 aa1.02□□□□□ -2.25
CHD9-206ENST00000562791 MT2AP02795 61 aa0.97□□□□□ -2.25
CHD9-206ENST00000562791 MT1FP04733 61 aa0.97□□□□□ -2.25
CHD9-206ENST00000562791 MT1GP13640 62 aa0.95□□□□□ -2.26
CHD9-206ENST00000562791 KRTAP21-1Q3LI58 79 aa0.95□□□□□ -2.26
CHD9-206ENST00000562791 MT1MQ8N339 61 aa0.9□□□□□ -2.27
CHD9-206ENST00000562791 KRTAP6-1Q3LI64 71 aa0.87□□□□□ -2.27
CHD9-206ENST00000562791 KRTAP19-6Q3LI70 58 aa0.76□□□□□ -2.29
CHD9-206ENST00000562791 PHGR1C9JFL3 82 aa0.72□□□□□ -2.29
CHD9-206ENST00000562791 MT4P47944 62 aa0.65□□□□□ -2.31
CHD9-206ENST00000562791 KRTAP20-2Q3LI61 65 aa0.39□□□□□ -2.35
Retrieved 78 of 20,778 RNA–protein pairs in 163.7 ms