RNA–Protein interactions for RNA: ENST00000562729.5

CHRFAM7A-204, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 4

Gene CHRFAM7A, Length 573 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-204ENST00000562729 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
CHRFAM7A-204ENST00000562729 SPATA8Q6RVD6 105 aa3.63□□□□□ -1.83
CHRFAM7A-204ENST00000562729 H7BZZ5 65 aa3.62□□□□□ -1.83
CHRFAM7A-204ENST00000562729 ANAPC13Q9BS18 74 aa3.62□□□□□ -1.83
CHRFAM7A-204ENST00000562729 A0A1B0GU69 56 aa3.61□□□□□ -1.83
CHRFAM7A-204ENST00000562729 NDUFAF8A1L188 74 aa3.61□□□□□ -1.83
CHRFAM7A-204ENST00000562729 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
CHRFAM7A-204ENST00000562729 CYSTM1Q9H1C7 97 aa3.59□□□□□ -1.83
CHRFAM7A-204ENST00000562729 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
CHRFAM7A-204ENST00000562729 SMIM26A0A096LP01 95 aa3.56□□□□□ -1.84
CHRFAM7A-204ENST00000562729 PRR15LQ9BU68 103 aa3.53□□□□□ -1.84
CHRFAM7A-204ENST00000562729 KRTAP12-1P59990 96 aa3.52□□□□□ -1.85
CHRFAM7A-204ENST00000562729 ATP5EP56381 51 aaPredicted RBP3.5□□□□□ -1.85
CHRFAM7A-204ENST00000562729 CCDC179H3BU77 68 aa3.49□□□□□ -1.85
CHRFAM7A-204ENST00000562729 A8MU10 97 aa3.48□□□□□ -1.85
CHRFAM7A-204ENST00000562729 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
CHRFAM7A-204ENST00000562729 MT1EP04732 61 aa3.44□□□□□ -1.86
CHRFAM7A-204ENST00000562729 KRTAP19-7Q3SYF9 63 aa3.44□□□□□ -1.86
CHRFAM7A-204ENST00000562729 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
CHRFAM7A-204ENST00000562729 TNP1P09430 55 aa3.42□□□□□ -1.86
CHRFAM7A-204ENST00000562729 KRTAP19-5Q3LI72 72 aa3.42□□□□□ -1.86
CHRFAM7A-204ENST00000562729 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
CHRFAM7A-204ENST00000562729 DSTQ03001 7570 aaKnown RBP3.39□□□□□ -1.87
CHRFAM7A-204ENST00000562729 TMEM258P61165 79 aa3.39□□□□□ -1.87
CHRFAM7A-204ENST00000562729 LINC01558Q9Y6Z2 57 aa3.39□□□□□ -1.87
CHRFAM7A-204ENST00000562729 LCE3CQ5T5A8 94 aa3.38□□□□□ -1.87
CHRFAM7A-204ENST00000562729 UQCR11O14957 56 aa3.37□□□□□ -1.87
CHRFAM7A-204ENST00000562729 MT1GP13640 62 aa3.36□□□□□ -1.87
CHRFAM7A-204ENST00000562729 C10orf95Q9H7T3 257 aa3.35□□□□□ -1.87
CHRFAM7A-204ENST00000562729 LCE3AQ5TA76 89 aa3.34□□□□□ -1.87
CHRFAM7A-204ENST00000562729 KRTAP5-2Q701N4 177 aa3.32□□□□□ -1.88
CHRFAM7A-204ENST00000562729 K7ERS5 55 aa3.31□□□□□ -1.88
CHRFAM7A-204ENST00000562729 MIR22HGQ0VDD5 57 aa3.29□□□□□ -1.88
CHRFAM7A-204ENST00000562729 MT1MQ8N339 61 aa3.29□□□□□ -1.88
CHRFAM7A-204ENST00000562729 MT1LQ93083 61 aa3.29□□□□□ -1.88
CHRFAM7A-204ENST00000562729 V9GYY9 64 aa3.26□□□□□ -1.89
CHRFAM7A-204ENST00000562729 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
CHRFAM7A-204ENST00000562729 GPR98Q8WXG9 6306 aa3.24□□□□□ -1.89
CHRFAM7A-204ENST00000562729 PSPHP1O15172 72 aa3.23□□□□□ -1.89
CHRFAM7A-204ENST00000562729 MT4P47944 62 aa3.21□□□□□ -1.9
CHRFAM7A-204ENST00000562729 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
CHRFAM7A-204ENST00000562729 Q1T7F1 81 aa3.16□□□□□ -1.9
CHRFAM7A-204ENST00000562729 A6NED7 52 aa3.15□□□□□ -1.91
CHRFAM7A-204ENST00000562729 HMCN1Q96RW7 5635 aa3.12□□□□□ -1.91
CHRFAM7A-204ENST00000562729 LCE3EQ5T5B0 92 aa3.09□□□□□ -1.91
CHRFAM7A-204ENST00000562729 CDC42SE1Q9NRR8 79 aa3.08□□□□□ -1.92
CHRFAM7A-204ENST00000562729 ROMO1P60602 79 aa3.01□□□□□ -1.93
CHRFAM7A-204ENST00000562729 RPS28P62857 69 aaKnown RBP3.01□□□□□ -1.93
CHRFAM7A-204ENST00000562729 AHNAK2Q8IVF2 5795 aa3.01□□□□□ -1.93
CHRFAM7A-204ENST00000562729 KRTAP12-4P60329 112 aa3□□□□□ -1.93
CHRFAM7A-204ENST00000562729 KRTAP5-5Q701N2 237 aaPredicted RBP2.96□□□□□ -1.94
CHRFAM7A-204ENST00000562729 KRTAP20-2Q3LI61 65 aa2.95□□□□□ -1.94
CHRFAM7A-204ENST00000562729 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
CHRFAM7A-204ENST00000562729 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
CHRFAM7A-204ENST00000562729 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
CHRFAM7A-204ENST00000562729 KRTAP5-7Q6L8G8 165 aa2.83□□□□□ -1.96
CHRFAM7A-204ENST00000562729 MT1AP04731 61 aa2.8□□□□□ -1.96
CHRFAM7A-204ENST00000562729 LCE1CQ5T751 118 aa2.8□□□□□ -1.96
CHRFAM7A-204ENST00000562729 LCE1BQ5T7P3 118 aa2.8□□□□□ -1.96
CHRFAM7A-204ENST00000562729 KRTAP6-1Q3LI64 71 aa2.78□□□□□ -1.96
CHRFAM7A-204ENST00000562729 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
CHRFAM7A-204ENST00000562729 BRK1Q8WUW1 75 aa2.7□□□□□ -1.98
CHRFAM7A-204ENST00000562729 KRTAP6-2Q3LI66 62 aa2.68□□□□□ -1.98
CHRFAM7A-204ENST00000562729 LCE3DQ9BYE3 92 aa2.57□□□□□ -2
CHRFAM7A-204ENST00000562729 PMAIP1Q13794 54 aa2.53□□□□□ -2
CHRFAM7A-204ENST00000562729 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
CHRFAM7A-204ENST00000562729 MUC5ACP98088 5654 aa2.48□□□□□ -2.01
CHRFAM7A-204ENST00000562729 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
CHRFAM7A-204ENST00000562729 MUC19Q7Z5P9 8384 aa2.42□□□□□ -2.02
CHRFAM7A-204ENST00000562729 PRO0628Q9UI54 55 aa2.29□□□□□ -2.04
CHRFAM7A-204ENST00000562729 KTN1-AS1Q86SY8 53 aa2.21□□□□□ -2.06
CHRFAM7A-204ENST00000562729 LUZP6Q538Z0 58 aa2.14□□□□□ -2.07
CHRFAM7A-204ENST00000562729 KRTAP21-2Q3LI59 83 aa2.04□□□□□ -2.08
CHRFAM7A-204ENST00000562729 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
CHRFAM7A-204ENST00000562729 PRM1P04553 51 aa1.53□□□□□ -2.16
CHRFAM7A-204ENST00000562729 KRTAP21-1Q3LI58 79 aa1.34□□□□□ -2.19
CHRFAM7A-204ENST00000562729 INE1O15225 51 aa1.3□□□□□ -2.2
CHRFAM7A-204ENST00000562729 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 51.8 ms