RNA–Protein interactions for RNA: ENST00000562136.1

HERC2-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 2

Gene HERC2, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-202ENST00000562136 KRTAP5-7Q6L8G8 165 aa4.24□□□□□ -1.73
HERC2-202ENST00000562136 H7BZZ5 65 aa4.23□□□□□ -1.73
HERC2-202ENST00000562136 A8MU10 97 aa4.22□□□□□ -1.73
HERC2-202ENST00000562136 COX7CP15954 63 aa4.22□□□□□ -1.73
HERC2-202ENST00000562136 KRTAP5-3Q6L8H2 238 aa4.2□□□□□ -1.74
HERC2-202ENST00000562136 A0A1B0GU69 56 aa4.19□□□□□ -1.74
HERC2-202ENST00000562136 KRTAP4-7Q9BYR0 210 aa4.19□□□□□ -1.74
HERC2-202ENST00000562136 KRTAP5-5Q701N2 237 aaPredicted RBP4.18□□□□□ -1.74
HERC2-202ENST00000562136 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
HERC2-202ENST00000562136 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
HERC2-202ENST00000562136 KRTAP12-3P60328 96 aa4.15□□□□□ -1.75
HERC2-202ENST00000562136 KRTAP12-4P60329 112 aa4.04□□□□□ -1.76
HERC2-202ENST00000562136 KRTAP19-4Q3LI73 84 aa4□□□□□ -1.77
HERC2-202ENST00000562136 PRR15LQ9BU68 103 aa4□□□□□ -1.77
HERC2-202ENST00000562136 SYNE1Q8NF91 8797 aaKnown RBP3.99□□□□□ -1.77
HERC2-202ENST00000562136 LOC100996750A0A140TA64 210 aa3.98□□□□□ -1.77
HERC2-202ENST00000562136 LINC01558Q9Y6Z2 57 aa3.97□□□□□ -1.77
HERC2-202ENST00000562136 KRTAP25-1Q3LHN0 102 aa3.94□□□□□ -1.78
HERC2-202ENST00000562136 ATP5EP56381 51 aaPredicted RBP3.9□□□□□ -1.79
HERC2-202ENST00000562136 UQCR11O14957 56 aa3.89□□□□□ -1.79
HERC2-202ENST00000562136 ANAPC13Q9BS18 74 aa3.89□□□□□ -1.79
HERC2-202ENST00000562136 KRTAP5-2Q701N4 177 aa3.87□□□□□ -1.79
HERC2-202ENST00000562136 CCDC179H3BU77 68 aa3.86□□□□□ -1.79
HERC2-202ENST00000562136 KRTAP4-11Q9BYQ6 195 aa3.85□□□□□ -1.79
HERC2-202ENST00000562136 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
HERC2-202ENST00000562136 KRTAP15-1Q3LI76 137 aa3.82□□□□□ -1.8
HERC2-202ENST00000562136 LCE3CQ5T5A8 94 aa3.82□□□□□ -1.8
HERC2-202ENST00000562136 MT1AP04731 61 aa3.79□□□□□ -1.8
HERC2-202ENST00000562136 KRTAP6-1Q3LI64 71 aa3.77□□□□□ -1.81
HERC2-202ENST00000562136 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
HERC2-202ENST00000562136 KRTAP5-8O75690 187 aa3.74□□□□□ -1.81
HERC2-202ENST00000562136 TMEM258P61165 79 aa3.71□□□□□ -1.82
HERC2-202ENST00000562136 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
HERC2-202ENST00000562136 K7ERS5 55 aa3.7□□□□□ -1.82
HERC2-202ENST00000562136 MUC5ACP98088 5654 aa3.69□□□□□ -1.82
HERC2-202ENST00000562136 KRTAP9-4Q9BYQ2 154 aa3.68□□□□□ -1.82
HERC2-202ENST00000562136 AHNAKQ09666 5890 aaKnown RBP3.68□□□□□ -1.82
HERC2-202ENST00000562136 KRTAP9-6A8MVA2 160 aa3.64□□□□□ -1.83
HERC2-202ENST00000562136 KRTAP6-2Q3LI66 62 aa3.63□□□□□ -1.83
HERC2-202ENST00000562136 OBSCNQ5VST9 7968 aa3.58□□□□□ -1.84
HERC2-202ENST00000562136 Q1T7F1 81 aa3.56□□□□□ -1.84
HERC2-202ENST00000562136 V9GYY9 64 aa3.55□□□□□ -1.84
HERC2-202ENST00000562136 PSPHP1O15172 72 aa3.54□□□□□ -1.84
HERC2-202ENST00000562136 KRTAP9-9Q9BYP9 154 aa3.53□□□□□ -1.84
HERC2-202ENST00000562136 CDC42SE1Q9NRR8 79 aa3.5□□□□□ -1.85
HERC2-202ENST00000562136 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
HERC2-202ENST00000562136 RPS28P62857 69 aaKnown RBP3.47□□□□□ -1.85
HERC2-202ENST00000562136 MT3P25713 68 aa3.46□□□□□ -1.86
HERC2-202ENST00000562136 PCP4P48539 62 aa3.45□□□□□ -1.86
HERC2-202ENST00000562136 ROMO1P60602 79 aa3.44□□□□□ -1.86
HERC2-202ENST00000562136 H3BS24 57 aa3.43□□□□□ -1.86
HERC2-202ENST00000562136 A6NED7 52 aa3.4□□□□□ -1.87
HERC2-202ENST00000562136 LCE1EQ5T753 118 aa3.28□□□□□ -1.88
HERC2-202ENST00000562136 A0A0A0MQY5 61 aa3.14□□□□□ -1.91
HERC2-202ENST00000562136 KRTAP4-2Q9BYR5 136 aa3.11□□□□□ -1.91
HERC2-202ENST00000562136 LCE1CQ5T751 118 aa3.04□□□□□ -1.92
HERC2-202ENST00000562136 LCE1BQ5T7P3 118 aa3.04□□□□□ -1.92
HERC2-202ENST00000562136 KRTAP4-12Q9BQ66 201 aa2.9□□□□□ -1.95
HERC2-202ENST00000562136 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
HERC2-202ENST00000562136 KRTAP5-11Q6L8G4 156 aa2.77□□□□□ -1.97
HERC2-202ENST00000562136 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
HERC2-202ENST00000562136 LCE3DQ9BYE3 92 aa2.69□□□□□ -1.98
HERC2-202ENST00000562136 BRK1Q8WUW1 75 aa2.62□□□□□ -1.99
HERC2-202ENST00000562136 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
HERC2-202ENST00000562136 PRAC1Q96KF2 57 aa2.58□□□□□ -2
HERC2-202ENST00000562136 KRTAP21-2Q3LI59 83 aa2.52□□□□□ -2.01
HERC2-202ENST00000562136 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
HERC2-202ENST00000562136 LCE3EQ5T5B0 92 aa2.5□□□□□ -2.01
HERC2-202ENST00000562136 PMAIP1Q13794 54 aa2.48□□□□□ -2.01
HERC2-202ENST00000562136 NDUFAF8A1L188 74 aa2.33□□□□□ -2.04
HERC2-202ENST00000562136 KTN1-AS1Q86SY8 53 aa2.3□□□□□ -2.04
HERC2-202ENST00000562136 LUZP6Q538Z0 58 aa2.28□□□□□ -2.04
HERC2-202ENST00000562136 KRTAP4-4Q9BYR3 166 aa2.25□□□□□ -2.05
HERC2-202ENST00000562136 MUC19Q7Z5P9 8384 aa2.22□□□□□ -2.05
HERC2-202ENST00000562136 KRTAP21-1Q3LI58 79 aa1.93□□□□□ -2.1
HERC2-202ENST00000562136 PRM1P04553 51 aa1.73□□□□□ -2.13
HERC2-202ENST00000562136 INE1O15225 51 aa1.72□□□□□ -2.13
HERC2-202ENST00000562136 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 29.3 ms