RNA–Protein interactions for RNA: ENST00000561279.5

IDH3A-222, Transcript of isocitrate dehydrogenase 3 (NAD(+)) alpha, human

TSL 4

Gene IDH3A, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
IDH3A-222	ENST00000561279	LOC100996750	A0A140TA64	210 aa		4.72	□□□□□ -1.65
IDH3A-222	ENST00000561279		A8MU10	97 aa		4.69	□□□□□ -1.66
IDH3A-222	ENST00000561279	COX7C	P15954	63 aa		4.68	□□□□□ -1.66
IDH3A-222	ENST00000561279	KRTAP5-7	Q6L8G8	165 aa		4.67	□□□□□ -1.66
IDH3A-222	ENST00000561279		H7BZZ5	65 aa		4.65	□□□□□ -1.67
IDH3A-222	ENST00000561279	KRTAP5-3	Q6L8H2	238 aa		4.65	□□□□□ -1.67
IDH3A-222	ENST00000561279	KRTAP12-3	P60328	96 aa		4.63	□□□□□ -1.67
IDH3A-222	ENST00000561279	KRTAP4-7	Q9BYR0	210 aa		4.62	□□□□□ -1.67
IDH3A-222	ENST00000561279	KRTAP20-2	Q3LI61	65 aa		4.59	□□□□□ -1.67
IDH3A-222	ENST00000561279	SPRR5	A0A1B0GTR4	108 aa		4.58	□□□□□ -1.68
IDH3A-222	ENST00000561279	KRTAP12-4	P60329	112 aa		4.56	□□□□□ -1.68
IDH3A-222	ENST00000561279	PRR15L	Q9BU68	103 aa		4.56	□□□□□ -1.68
IDH3A-222	ENST00000561279	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.53	□□□□□ -1.68
IDH3A-222	ENST00000561279	KRTAP19-4	Q3LI73	84 aa		4.43	□□□□□ -1.7
IDH3A-222	ENST00000561279	KRTAP25-1	Q3LHN0	102 aa		4.4	□□□□□ -1.71
IDH3A-222	ENST00000561279	LINC01558	Q9Y6Z2	57 aa		4.4	□□□□□ -1.71
IDH3A-222	ENST00000561279	UQCR11	O14957	56 aa		4.38	□□□□□ -1.71
IDH3A-222	ENST00000561279	ANAPC13	Q9BS18	74 aa		4.38	□□□□□ -1.71
IDH3A-222	ENST00000561279	ATP5E	P56381	51 aa	Predicted RBP	4.36	□□□□□ -1.71
IDH3A-222	ENST00000561279	SYNE1	Q8NF91	8797 aa	Known RBP	4.36	□□□□□ -1.71
IDH3A-222	ENST00000561279		K7ERS5	55 aa		4.28	□□□□□ -1.72
IDH3A-222	ENST00000561279	KRTAP4-11	Q9BYQ6	195 aa		4.26	□□□□□ -1.73
IDH3A-222	ENST00000561279	CCDC179	H3BU77	68 aa		4.25	□□□□□ -1.73
IDH3A-222	ENST00000561279	KRTAP15-1	Q3LI76	137 aa		4.25	□□□□□ -1.73
IDH3A-222	ENST00000561279	MIR22HG	Q0VDD5	57 aa		4.24	□□□□□ -1.73
IDH3A-222	ENST00000561279	LCE3C	Q5T5A8	94 aa		4.24	□□□□□ -1.73
IDH3A-222	ENST00000561279	KRTAP23-1	A1A580	65 aa		4.23	□□□□□ -1.73
IDH3A-222	ENST00000561279	KRTAP5-2	Q701N4	177 aa		4.19	□□□□□ -1.74
IDH3A-222	ENST00000561279	MT1A	P04731	61 aa		4.18	□□□□□ -1.74
IDH3A-222	ENST00000561279	KRTAP6-1	Q3LI64	71 aa		4.14	□□□□□ -1.75
IDH3A-222	ENST00000561279	TMEM258	P61165	79 aa		4.12	□□□□□ -1.75
IDH3A-222	ENST00000561279	KRTAP5-8	O75690	187 aa		4.11	□□□□□ -1.75
IDH3A-222	ENST00000561279	KRTAP9-4	Q9BYQ2	154 aa		4.08	□□□□□ -1.76
IDH3A-222	ENST00000561279	KRTAP6-2	Q3LI66	62 aa		4.02	□□□□□ -1.77
IDH3A-222	ENST00000561279		V9GYY9	64 aa		4.02	□□□□□ -1.77
IDH3A-222	ENST00000561279	PSPHP1	O15172	72 aa		3.99	□□□□□ -1.77
IDH3A-222	ENST00000561279	RPS28	P62857	69 aa	Known RBP	3.99	□□□□□ -1.77
IDH3A-222	ENST00000561279	KRTAP9-9	Q9BYP9	154 aa		3.99	□□□□□ -1.77
IDH3A-222	ENST00000561279	MUC5AC	P98088	5654 aa		3.98	□□□□□ -1.77
IDH3A-222	ENST00000561279	CDC42SE1	Q9NRR8	79 aa		3.97	□□□□□ -1.77
IDH3A-222	ENST00000561279	OBSCN	Q5VST9	7968 aa		3.97	□□□□□ -1.77
IDH3A-222	ENST00000561279		Q1T7F1	81 aa		3.95	□□□□□ -1.78
IDH3A-222	ENST00000561279	AHNAK	Q09666	5890 aa	Known RBP	3.94	□□□□□ -1.78
IDH3A-222	ENST00000561279	KRTAP9-6	A8MVA2	160 aa		3.93	□□□□□ -1.78
IDH3A-222	ENST00000561279	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.89	□□□□□ -1.79
IDH3A-222	ENST00000561279		A6NED7	52 aa		3.87	□□□□□ -1.79
IDH3A-222	ENST00000561279	MT3	P25713	68 aa		3.87	□□□□□ -1.79
IDH3A-222	ENST00000561279	ROMO1	P60602	79 aa		3.87	□□□□□ -1.79
IDH3A-222	ENST00000561279	KRTAP5-1	Q6L8H4	278 aa		3.8	□□□□□ -1.8
IDH3A-222	ENST00000561279	KRTAP4-12	Q9BQ66	201 aa		3.7	□□□□□ -1.82
IDH3A-222	ENST00000561279	KRTAP4-2	Q9BYR5	136 aa		3.66	□□□□□ -1.82
IDH3A-222	ENST00000561279	LCE1E	Q5T753	118 aa		3.61	□□□□□ -1.83
IDH3A-222	ENST00000561279	LCE1B	Q5T7P3	118 aa		3.4	□□□□□ -1.87
IDH3A-222	ENST00000561279	LCE1C	Q5T751	118 aa		3.34	□□□□□ -1.87
IDH3A-222	ENST00000561279	PCP4	P48539	62 aa		3.22	□□□□□ -1.89
IDH3A-222	ENST00000561279	LCE1F	Q5T754	118 aa		3.04	□□□□□ -1.92
IDH3A-222	ENST00000561279	KRTAP5-11	Q6L8G4	156 aa		3.03	□□□□□ -1.92
IDH3A-222	ENST00000561279	LCE3D	Q9BYE3	92 aa		3.02	□□□□□ -1.93
IDH3A-222	ENST00000561279	BRK1	Q8WUW1	75 aa		3	□□□□□ -1.93
IDH3A-222	ENST00000561279	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.99	□□□□□ -1.93
IDH3A-222	ENST00000561279		H3BS24	57 aa		2.95	□□□□□ -1.94
IDH3A-222	ENST00000561279	PHGR1	C9JFL3	82 aa		2.83	□□□□□ -1.96
IDH3A-222	ENST00000561279	PMAIP1	Q13794	54 aa		2.82	□□□□□ -1.96
IDH3A-222	ENST00000561279	LCE3E	Q5T5B0	92 aa		2.8	□□□□□ -1.96
IDH3A-222	ENST00000561279	KRTAP21-2	Q3LI59	83 aa		2.73	□□□□□ -1.97
IDH3A-222	ENST00000561279	PRAC1	Q96KF2	57 aa		2.73	□□□□□ -1.97
IDH3A-222	ENST00000561279	SVIP	Q8NHG7	77 aa		2.67	□□□□□ -1.98
IDH3A-222	ENST00000561279	KRTAP4-4	Q9BYR3	166 aa		2.53	□□□□□ -2
IDH3A-222	ENST00000561279	PRO0628	Q9UI54	55 aa		2.5	□□□□□ -2.01
IDH3A-222	ENST00000561279	LUZP6	Q538Z0	58 aa		2.47	□□□□□ -2.01
IDH3A-222	ENST00000561279	MUC19	Q7Z5P9	8384 aa		2.46	□□□□□ -2.01
IDH3A-222	ENST00000561279	KTN1-AS1	Q86SY8	53 aa		2.32	□□□□□ -2.04
IDH3A-222	ENST00000561279	KRTAP21-1	Q3LI58	79 aa		2.17	□□□□□ -2.06
IDH3A-222	ENST00000561279	PRM1	P04553	51 aa		1.94	□□□□□ -2.1
IDH3A-222	ENST00000561279	NDUFAF8	A1L188	74 aa		1.82	□□□□□ -2.12
IDH3A-222	ENST00000561279	MUC16	Q8WXI7	14507 aa		1.75	□□□□□ -2.13
IDH3A-222	ENST00000561279		A0A0A0MQY5	61 aa		1.71	□□□□□ -2.14
IDH3A-222	ENST00000561279	INE1	O15225	51 aa		1.41	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 39.8 ms