RNA–Protein interactions for RNA: ENST00000561277.5

TSPAN3-210, Transcript of tetraspanin 3, humanhuman

TSL 5 BASIC

Gene TSPAN3, Length 1,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-210ENST00000561277 DSTQ03001 7570 aaKnown RBP7.21□□□□□ -1.26
TSPAN3-210ENST00000561277 A6NED7 52 aa7.16□□□□□ -1.26
TSPAN3-210ENST00000561277 RPS28P62857 69 aaKnown RBP7.14□□□□□ -1.27
TSPAN3-210ENST00000561277 MT1GP13640 62 aa7.12□□□□□ -1.27
TSPAN3-210ENST00000561277 MT1LQ93083 61 aa7.11□□□□□ -1.27
TSPAN3-210ENST00000561277 PP632Q6XCG6 107 aa7.08□□□□□ -1.28
TSPAN3-210ENST00000561277 KRTAP25-1Q3LHN0 102 aa7.06□□□□□ -1.28
TSPAN3-210ENST00000561277 MT1MQ8N339 61 aa7.03□□□□□ -1.28
TSPAN3-210ENST00000561277 KRTAP12-3P60328 96 aa7.01□□□□□ -1.29
TSPAN3-210ENST00000561277 KRTAP4-3Q9BYR4 195 aa6.89□□□□□ -1.31
TSPAN3-210ENST00000561277 CDC42SE1Q9NRR8 79 aa6.87□□□□□ -1.31
TSPAN3-210ENST00000561277 KRTAP4-7Q9BYR0 210 aa6.81□□□□□ -1.32
TSPAN3-210ENST00000561277 ROMO1P60602 79 aa6.77□□□□□ -1.33
TSPAN3-210ENST00000561277 KRTAP23-1A1A580 65 aa6.76□□□□□ -1.33
TSPAN3-210ENST00000561277 KRTAP4-9Q9BYQ8 210 aa6.76□□□□□ -1.33
TSPAN3-210ENST00000561277 LCE4AQ5TA78 99 aa6.64□□□□□ -1.35
TSPAN3-210ENST00000561277 KRTAP15-1Q3LI76 137 aa6.61□□□□□ -1.35
TSPAN3-210ENST00000561277 LCE1DQ5T752 114 aa6.61□□□□□ -1.35
TSPAN3-210ENST00000561277 MT4P47944 62 aa6.6□□□□□ -1.35
TSPAN3-210ENST00000561277 KRTAP5-4Q6L8H1 288 aa6.54□□□□□ -1.36
TSPAN3-210ENST00000561277 HMCN1Q96RW7 5635 aa6.53□□□□□ -1.36
TSPAN3-210ENST00000561277 KRTAP19-4Q3LI73 84 aa6.52□□□□□ -1.36
TSPAN3-210ENST00000561277 LCE3CQ5T5A8 94 aa6.47□□□□□ -1.37
TSPAN3-210ENST00000561277 LOC100996750A0A140TA64 210 aa6.44□□□□□ -1.38
TSPAN3-210ENST00000561277 BRK1Q8WUW1 75 aa6.44□□□□□ -1.38
TSPAN3-210ENST00000561277 GPR98Q8WXG9 6306 aa6.42□□□□□ -1.38
TSPAN3-210ENST00000561277 KRTAP5-5Q701N2 237 aaPredicted RBP6.4□□□□□ -1.38
TSPAN3-210ENST00000561277 KRTAP4-6Q9BYQ5 205 aa6.4□□□□□ -1.38
TSPAN3-210ENST00000561277 AHNAK2Q8IVF2 5795 aa6.21□□□□□ -1.42
TSPAN3-210ENST00000561277 KRTAP12-4P60329 112 aa6.2□□□□□ -1.42
TSPAN3-210ENST00000561277 SYNE1Q8NF91 8797 aaKnown RBP6.19□□□□□ -1.42
TSPAN3-210ENST00000561277 KRTAP20-2Q3LI61 65 aa6.19□□□□□ -1.42
TSPAN3-210ENST00000561277 SPRR5A0A1B0GTR4 108 aa6.15□□□□□ -1.42
TSPAN3-210ENST00000561277 PRO0628Q9UI54 55 aa6.15□□□□□ -1.42
TSPAN3-210ENST00000561277 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
TSPAN3-210ENST00000561277 MT1AP04731 61 aa6.04□□□□□ -1.44
TSPAN3-210ENST00000561277 PMAIP1Q13794 54 aa6.03□□□□□ -1.44
TSPAN3-210ENST00000561277 KRTAP6-1Q3LI64 71 aa6.01□□□□□ -1.45
TSPAN3-210ENST00000561277 KRTAP5-10Q6L8G5 202 aa6□□□□□ -1.45
TSPAN3-210ENST00000561277 KRTAP5-3Q6L8H2 238 aa5.98□□□□□ -1.45
TSPAN3-210ENST00000561277 KRTAP9-4Q9BYQ2 154 aa5.8□□□□□ -1.48
TSPAN3-210ENST00000561277 PRAC1Q96KF2 57 aa5.78□□□□□ -1.48
TSPAN3-210ENST00000561277 KRTAP5-2Q701N4 177 aa5.77□□□□□ -1.49
TSPAN3-210ENST00000561277 KRTAP5-7Q6L8G8 165 aa5.73□□□□□ -1.49
TSPAN3-210ENST00000561277 KRTAP6-2Q3LI66 62 aa5.71□□□□□ -1.5
TSPAN3-210ENST00000561277 KTN1-AS1Q86SY8 53 aa5.64□□□□□ -1.51
TSPAN3-210ENST00000561277 KRTAP4-11Q9BYQ6 195 aa5.59□□□□□ -1.51
TSPAN3-210ENST00000561277 OBSCNQ5VST9 7968 aa5.54□□□□□ -1.52
TSPAN3-210ENST00000561277 MT3P25713 68 aa5.51□□□□□ -1.53
TSPAN3-210ENST00000561277 KRTAP5-8O75690 187 aa5.39□□□□□ -1.55
TSPAN3-210ENST00000561277 H3BS24 57 aa5.23□□□□□ -1.57
TSPAN3-210ENST00000561277 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.59
TSPAN3-210ENST00000561277 KRTAP9-9Q9BYP9 154 aa5.08□□□□□ -1.6
TSPAN3-210ENST00000561277 MUC5BQ9HC84 5762 aaPredicted RBP5.06□□□□□ -1.6
TSPAN3-210ENST00000561277 MUC5ACP98088 5654 aa5.04□□□□□ -1.6
TSPAN3-210ENST00000561277 AHNAKQ09666 5890 aaKnown RBP5.02□□□□□ -1.61
TSPAN3-210ENST00000561277 LCE1EQ5T753 118 aa4.99□□□□□ -1.61
TSPAN3-210ENST00000561277 LUZP6Q538Z0 58 aa4.8□□□□□ -1.64
TSPAN3-210ENST00000561277 LCE1BQ5T7P3 118 aa4.75□□□□□ -1.65
TSPAN3-210ENST00000561277 KRTAP4-2Q9BYR5 136 aa4.71□□□□□ -1.66
TSPAN3-210ENST00000561277 LCE3DQ9BYE3 92 aa4.7□□□□□ -1.66
TSPAN3-210ENST00000561277 LCE1CQ5T751 118 aa4.64□□□□□ -1.67
TSPAN3-210ENST00000561277 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
TSPAN3-210ENST00000561277 LCE3EQ5T5B0 92 aa4.46□□□□□ -1.7
TSPAN3-210ENST00000561277 NDUFAF8A1L188 74 aa4.44□□□□□ -1.7
TSPAN3-210ENST00000561277 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
TSPAN3-210ENST00000561277 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.23□□□□□ -1.73
TSPAN3-210ENST00000561277 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
TSPAN3-210ENST00000561277 LCE1FQ5T754 118 aa3.99□□□□□ -1.77
TSPAN3-210ENST00000561277 KRTAP21-2Q3LI59 83 aa3.93□□□□□ -1.78
TSPAN3-210ENST00000561277 INE1O15225 51 aa3.78□□□□□ -1.8
TSPAN3-210ENST00000561277 KRTAP4-4Q9BYR3 166 aa3.63□□□□□ -1.83
TSPAN3-210ENST00000561277 PHGR1C9JFL3 82 aa3.61□□□□□ -1.83
TSPAN3-210ENST00000561277 PRM1P04553 51 aa3.49□□□□□ -1.85
TSPAN3-210ENST00000561277 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
TSPAN3-210ENST00000561277 KRTAP21-1Q3LI58 79 aa2.64□□□□□ -1.99
TSPAN3-210ENST00000561277 MUC16Q8WXI7 14507 aa2.33□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 1131.7 ms