RNA–Protein interactions for RNA: ENST00000560856.5

SNRPA1-213, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 4

Gene SNRPA1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-213ENST00000560856 BRK1Q8WUW1 75 aa5.61□□□□□ -1.51
SNRPA1-213ENST00000560856 TNP1P09430 55 aa5.6□□□□□ -1.51
SNRPA1-213ENST00000560856 PSPHP1O15172 72 aa5.59□□□□□ -1.51
SNRPA1-213ENST00000560856 KRTAP19-3Q7Z4W3 81 aa5.59□□□□□ -1.51
SNRPA1-213ENST00000560856 MIR22HGQ0VDD5 57 aa5.58□□□□□ -1.52
SNRPA1-213ENST00000560856 LCE3AQ5TA76 89 aa5.57□□□□□ -1.52
SNRPA1-213ENST00000560856 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
SNRPA1-213ENST00000560856 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
SNRPA1-213ENST00000560856 KRTAP4-12Q9BQ66 201 aa5.55□□□□□ -1.52
SNRPA1-213ENST00000560856 MT1GP13640 62 aa5.48□□□□□ -1.53
SNRPA1-213ENST00000560856 MT1LQ93083 61 aa5.46□□□□□ -1.54
SNRPA1-213ENST00000560856 KTN1-AS1Q86SY8 53 aa5.43□□□□□ -1.54
SNRPA1-213ENST00000560856 KRTAP4-7Q9BYR0 210 aa5.43□□□□□ -1.54
SNRPA1-213ENST00000560856 DSTQ03001 7570 aaKnown RBP5.42□□□□□ -1.54
SNRPA1-213ENST00000560856 A6NED7 52 aa5.41□□□□□ -1.54
SNRPA1-213ENST00000560856 MT1MQ8N339 61 aa5.4□□□□□ -1.54
SNRPA1-213ENST00000560856 K7ERS5 55 aa5.39□□□□□ -1.55
SNRPA1-213ENST00000560856 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
SNRPA1-213ENST00000560856 PP632Q6XCG6 107 aa5.37□□□□□ -1.55
SNRPA1-213ENST00000560856 KRTAP12-3P60328 96 aa5.34□□□□□ -1.55
SNRPA1-213ENST00000560856 LCE1DQ5T752 114 aa5.31□□□□□ -1.56
SNRPA1-213ENST00000560856 GPR98Q8WXG9 6306 aa5.29□□□□□ -1.56
SNRPA1-213ENST00000560856 KRTAP4-3Q9BYR4 195 aa5.28□□□□□ -1.56
SNRPA1-213ENST00000560856 CDC42SE1Q9NRR8 79 aa5.24□□□□□ -1.57
SNRPA1-213ENST00000560856 KRTAP4-9Q9BYQ8 210 aa5.21□□□□□ -1.58
SNRPA1-213ENST00000560856 KRTAP23-1A1A580 65 aa5.2□□□□□ -1.58
SNRPA1-213ENST00000560856 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
SNRPA1-213ENST00000560856 ROMO1P60602 79 aa5.11□□□□□ -1.59
SNRPA1-213ENST00000560856 H3BS24 57 aa5.1□□□□□ -1.59
SNRPA1-213ENST00000560856 LCE4AQ5TA78 99 aa5.1□□□□□ -1.59
SNRPA1-213ENST00000560856 KRTAP5-4Q6L8H1 288 aa5.09□□□□□ -1.59
SNRPA1-213ENST00000560856 KRTAP19-4Q3LI73 84 aa5.05□□□□□ -1.6
SNRPA1-213ENST00000560856 KRTAP15-1Q3LI76 137 aa5.05□□□□□ -1.6
SNRPA1-213ENST00000560856 MT4P47944 62 aa5.01□□□□□ -1.61
SNRPA1-213ENST00000560856 HMCN1Q96RW7 5635 aa4.99□□□□□ -1.61
SNRPA1-213ENST00000560856 KRTAP5-5Q701N2 237 aaPredicted RBP4.96□□□□□ -1.62
SNRPA1-213ENST00000560856 KRTAP4-11Q9BYQ6 195 aa4.96□□□□□ -1.62
SNRPA1-213ENST00000560856 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
SNRPA1-213ENST00000560856 LCE3CQ5T5A8 94 aa4.94□□□□□ -1.62
SNRPA1-213ENST00000560856 PRAC1Q96KF2 57 aa4.84□□□□□ -1.63
SNRPA1-213ENST00000560856 AHNAK2Q8IVF2 5795 aa4.82□□□□□ -1.64
SNRPA1-213ENST00000560856 SYNE1Q8NF91 8797 aaKnown RBP4.81□□□□□ -1.64
SNRPA1-213ENST00000560856 KRTAP20-2Q3LI61 65 aa4.76□□□□□ -1.65
SNRPA1-213ENST00000560856 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
SNRPA1-213ENST00000560856 KRTAP5-10Q6L8G5 202 aa4.74□□□□□ -1.65
SNRPA1-213ENST00000560856 KRTAP9-6A8MVA2 160 aa4.72□□□□□ -1.65
SNRPA1-213ENST00000560856 KRTAP12-4P60329 112 aa4.72□□□□□ -1.65
SNRPA1-213ENST00000560856 MT1AP04731 61 aa4.64□□□□□ -1.67
SNRPA1-213ENST00000560856 KRTAP6-1Q3LI64 71 aa4.62□□□□□ -1.67
SNRPA1-213ENST00000560856 KRTAP5-7Q6L8G8 165 aa4.58□□□□□ -1.68
SNRPA1-213ENST00000560856 A0A0A0MQY5 61 aa4.49□□□□□ -1.69
SNRPA1-213ENST00000560856 KRTAP5-2Q701N4 177 aa4.49□□□□□ -1.69
SNRPA1-213ENST00000560856 KRTAP6-2Q3LI66 62 aa4.36□□□□□ -1.71
SNRPA1-213ENST00000560856 NDUFAF8A1L188 74 aa4.3□□□□□ -1.72
SNRPA1-213ENST00000560856 MT3P25713 68 aa4.22□□□□□ -1.73
SNRPA1-213ENST00000560856 LUZP6Q538Z0 58 aa4.22□□□□□ -1.73
SNRPA1-213ENST00000560856 KRTAP5-8O75690 187 aa4.18□□□□□ -1.74
SNRPA1-213ENST00000560856 OBSCNQ5VST9 7968 aa4.14□□□□□ -1.75
SNRPA1-213ENST00000560856 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
SNRPA1-213ENST00000560856 MUC5ACP98088 5654 aa4.03□□□□□ -1.76
SNRPA1-213ENST00000560856 MUC5BQ9HC84 5762 aaPredicted RBP4.01□□□□□ -1.77
SNRPA1-213ENST00000560856 KRTAP5-1Q6L8H4 278 aa3.99□□□□□ -1.77
SNRPA1-213ENST00000560856 LCE1EQ5T753 118 aa3.86□□□□□ -1.79
SNRPA1-213ENST00000560856 INE1O15225 51 aa3.74□□□□□ -1.81
SNRPA1-213ENST00000560856 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.59□□□□□ -1.83
SNRPA1-213ENST00000560856 LCE1CQ5T751 118 aa3.58□□□□□ -1.84
SNRPA1-213ENST00000560856 LCE1BQ5T7P3 118 aa3.58□□□□□ -1.84
SNRPA1-213ENST00000560856 LCE3DQ9BYE3 92 aa3.58□□□□□ -1.84
SNRPA1-213ENST00000560856 LCE3EQ5T5B0 92 aa3.39□□□□□ -1.87
SNRPA1-213ENST00000560856 KRTAP5-11Q6L8G4 156 aa3.32□□□□□ -1.88
SNRPA1-213ENST00000560856 LCE1FQ5T754 118 aa3.1□□□□□ -1.91
SNRPA1-213ENST00000560856 KRTAP21-2Q3LI59 83 aa3.06□□□□□ -1.92
SNRPA1-213ENST00000560856 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SNRPA1-213ENST00000560856 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
SNRPA1-213ENST00000560856 PRM1P04553 51 aa2.63□□□□□ -1.99
SNRPA1-213ENST00000560856 MUC19Q7Z5P9 8384 aa2.57□□□□□ -2
SNRPA1-213ENST00000560856 KRTAP21-1Q3LI58 79 aa2.03□□□□□ -2.08
SNRPA1-213ENST00000560856 MUC16Q8WXI7 14507 aa1.85□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 144.2 ms