RNA–Protein interactions for RNA: ENST00000560754.1

RNF31-223, Transcript of ring finger protein 31, human

TSL 3

Gene RNF31, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RNF31-223	ENST00000560754		H7BZZ5	65 aa		4.61	□□□□□ -1.67
RNF31-223	ENST00000560754	COX7C	P15954	63 aa		4.6	□□□□□ -1.67
RNF31-223	ENST00000560754		A0A1B0GU69	56 aa		4.59	□□□□□ -1.67
RNF31-223	ENST00000560754	KRTAP5-7	Q6L8G8	165 aa		4.58	□□□□□ -1.68
RNF31-223	ENST00000560754	KRTAP5-3	Q6L8H2	238 aa		4.58	□□□□□ -1.68
RNF31-223	ENST00000560754	KRTAP4-7	Q9BYR0	210 aa		4.58	□□□□□ -1.68
RNF31-223	ENST00000560754	KRTAP12-3	P60328	96 aa		4.53	□□□□□ -1.68
RNF31-223	ENST00000560754	KRTAP20-2	Q3LI61	65 aa		4.52	□□□□□ -1.69
RNF31-223	ENST00000560754	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.52	□□□□□ -1.69
RNF31-223	ENST00000560754	SPRR5	A0A1B0GTR4	108 aa		4.5	□□□□□ -1.69
RNF31-223	ENST00000560754	KRTAP12-4	P60329	112 aa		4.42	□□□□□ -1.7
RNF31-223	ENST00000560754	PRR15L	Q9BU68	103 aa		4.37	□□□□□ -1.71
RNF31-223	ENST00000560754	LOC100996750	A0A140TA64	210 aa		4.35	□□□□□ -1.71
RNF31-223	ENST00000560754	KRTAP19-4	Q3LI73	84 aa		4.35	□□□□□ -1.71
RNF31-223	ENST00000560754	SYNE1	Q8NF91	8797 aa	Known RBP	4.34	□□□□□ -1.71
RNF31-223	ENST00000560754	LINC01558	Q9Y6Z2	57 aa		4.33	□□□□□ -1.72
RNF31-223	ENST00000560754	KRTAP25-1	Q3LHN0	102 aa		4.28	□□□□□ -1.72
RNF31-223	ENST00000560754	ANAPC13	Q9BS18	74 aa		4.26	□□□□□ -1.73
RNF31-223	ENST00000560754	UQCR11	O14957	56 aa		4.25	□□□□□ -1.73
RNF31-223	ENST00000560754	ATP5E	P56381	51 aa	Predicted RBP	4.23	□□□□□ -1.73
RNF31-223	ENST00000560754	CCDC179	H3BU77	68 aa		4.21	□□□□□ -1.74
RNF31-223	ENST00000560754	KRTAP4-11	Q9BYQ6	195 aa		4.19	□□□□□ -1.74
RNF31-223	ENST00000560754	KRTAP23-1	A1A580	65 aa		4.17	□□□□□ -1.74
RNF31-223	ENST00000560754	KRTAP15-1	Q3LI76	137 aa		4.17	□□□□□ -1.74
RNF31-223	ENST00000560754	LCE3C	Q5T5A8	94 aa		4.17	□□□□□ -1.74
RNF31-223	ENST00000560754	KRTAP5-2	Q701N4	177 aa		4.16	□□□□□ -1.74
RNF31-223	ENST00000560754	MIR22HG	Q0VDD5	57 aa		4.12	□□□□□ -1.75
RNF31-223	ENST00000560754	MT1A	P04731	61 aa		4.1	□□□□□ -1.75
RNF31-223	ENST00000560754	KRTAP6-1	Q3LI64	71 aa		4.1	□□□□□ -1.75
RNF31-223	ENST00000560754	KRTAP5-8	O75690	187 aa		4.07	□□□□□ -1.76
RNF31-223	ENST00000560754		K7ERS5	55 aa		4.06	□□□□□ -1.76
RNF31-223	ENST00000560754	TMEM258	P61165	79 aa		4.03	□□□□□ -1.76
RNF31-223	ENST00000560754	KRTAP9-4	Q9BYQ2	154 aa		4.03	□□□□□ -1.76
RNF31-223	ENST00000560754	OBSCN	Q5VST9	7968 aa		4	□□□□□ -1.77
RNF31-223	ENST00000560754	KRTAP9-6	A8MVA2	160 aa		3.96	□□□□□ -1.78
RNF31-223	ENST00000560754	KRTAP6-2	Q3LI66	62 aa		3.96	□□□□□ -1.78
RNF31-223	ENST00000560754	MUC5AC	P98088	5654 aa		3.94	□□□□□ -1.78
RNF31-223	ENST00000560754	PSPHP1	O15172	72 aa		3.89	□□□□□ -1.79
RNF31-223	ENST00000560754		Q1T7F1	81 aa		3.89	□□□□□ -1.79
RNF31-223	ENST00000560754	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.89	□□□□□ -1.79
RNF31-223	ENST00000560754		V9GYY9	64 aa		3.88	□□□□□ -1.79
RNF31-223	ENST00000560754	AHNAK	Q09666	5890 aa	Known RBP	3.88	□□□□□ -1.79
RNF31-223	ENST00000560754	KRTAP9-9	Q9BYP9	154 aa		3.86	□□□□□ -1.79
RNF31-223	ENST00000560754	RPS28	P62857	69 aa	Known RBP	3.82	□□□□□ -1.8
RNF31-223	ENST00000560754	CDC42SE1	Q9NRR8	79 aa		3.82	□□□□□ -1.8
RNF31-223	ENST00000560754	KRTAP5-1	Q6L8H4	278 aa		3.79	□□□□□ -1.8
RNF31-223	ENST00000560754	MT3	P25713	68 aa		3.77	□□□□□ -1.81
RNF31-223	ENST00000560754	ROMO1	P60602	79 aa		3.77	□□□□□ -1.81
RNF31-223	ENST00000560754		A6NED7	52 aa		3.73	□□□□□ -1.81
RNF31-223	ENST00000560754	SVIP	Q8NHG7	77 aa		3.66	□□□□□ -1.82
RNF31-223	ENST00000560754	PCP4	P48539	62 aa		3.56	□□□□□ -1.84
RNF31-223	ENST00000560754	LCE1E	Q5T753	118 aa		3.56	□□□□□ -1.84
RNF31-223	ENST00000560754	KRTAP4-2	Q9BYR5	136 aa		3.36	□□□□□ -1.87
RNF31-223	ENST00000560754	LCE1C	Q5T751	118 aa		3.3	□□□□□ -1.88
RNF31-223	ENST00000560754	LCE1B	Q5T7P3	118 aa		3.3	□□□□□ -1.88
RNF31-223	ENST00000560754	KRTAP4-12	Q9BQ66	201 aa		3.09	□□□□□ -1.91
RNF31-223	ENST00000560754	KRTAP5-11	Q6L8G4	156 aa		2.99	□□□□□ -1.93
RNF31-223	ENST00000560754	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	2.99	□□□□□ -1.93
RNF31-223	ENST00000560754	LCE1F	Q5T754	118 aa		2.98	□□□□□ -1.93
RNF31-223	ENST00000560754	LCE3D	Q9BYE3	92 aa		2.96	□□□□□ -1.94
RNF31-223	ENST00000560754	PRO0628	Q9UI54	55 aa		2.91	□□□□□ -1.94
RNF31-223	ENST00000560754	BRK1	Q8WUW1	75 aa		2.88	□□□□□ -1.95
RNF31-223	ENST00000560754	LCE3E	Q5T5B0	92 aa		2.74	□□□□□ -1.97
RNF31-223	ENST00000560754	PHGR1	C9JFL3	82 aa		2.73	□□□□□ -1.97
RNF31-223	ENST00000560754	PMAIP1	Q13794	54 aa		2.73	□□□□□ -1.97
RNF31-223	ENST00000560754	KRTAP21-2	Q3LI59	83 aa		2.73	□□□□□ -1.97
RNF31-223	ENST00000560754		H3BS24	57 aa		2.7	□□□□□ -1.98
RNF31-223	ENST00000560754	KTN1-AS1	Q86SY8	53 aa		2.67	□□□□□ -1.98
RNF31-223	ENST00000560754	PRAC1	Q96KF2	57 aa		2.67	□□□□□ -1.98
RNF31-223	ENST00000560754		A0A0A0MQY5	61 aa		2.58	□□□□□ -2
RNF31-223	ENST00000560754	KRTAP4-4	Q9BYR3	166 aa		2.49	□□□□□ -2.01
RNF31-223	ENST00000560754	MUC19	Q7Z5P9	8384 aa		2.47	□□□□□ -2.01
RNF31-223	ENST00000560754	LUZP6	Q538Z0	58 aa		2.3	□□□□□ -2.04
RNF31-223	ENST00000560754	KRTAP21-1	Q3LI58	79 aa		2.09	□□□□□ -2.07
RNF31-223	ENST00000560754	NDUFAF8	A1L188	74 aa		2.06	□□□□□ -2.08
RNF31-223	ENST00000560754	PRM1	P04553	51 aa		1.89	□□□□□ -2.11
RNF31-223	ENST00000560754	INE1	O15225	51 aa		1.78	□□□□□ -2.12
RNF31-223	ENST00000560754	MUC16	Q8WXI7	14507 aa		1.72	□□□□□ -2.13

Retrieved 78 of 20,778 RNA–protein pairs in 208.6 ms