RNA–Protein interactions for RNA: ENST00000560599.5

HMBOX1-215, Transcript of homeobox containing 1, humanhuman

TSL 5

Gene HMBOX1, Length 1,426 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-215ENST00000560599 KRTAP9-6A8MVA2 160 aa6.48□□□□□ -1.37
HMBOX1-215ENST00000560599 MT1GP13640 62 aa6.45□□□□□ -1.38
HMBOX1-215ENST00000560599 MT1MQ8N339 61 aa6.42□□□□□ -1.38
HMBOX1-215ENST00000560599 CRCT1Q9UGL9 99 aa6.42□□□□□ -1.38
HMBOX1-215ENST00000560599 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
HMBOX1-215ENST00000560599 LCE5AQ5TCM9 118 aa6.3□□□□□ -1.4
HMBOX1-215ENST00000560599 KRTAP4-3Q9BYR4 195 aa6.25□□□□□ -1.41
HMBOX1-215ENST00000560599 KRTAP2-3P0C7H8 128 aa6.22□□□□□ -1.41
HMBOX1-215ENST00000560599 KRTAP2-4Q9BYR9 128 aa6.22□□□□□ -1.41
HMBOX1-215ENST00000560599 KRTAP2-1Q9BYU5 128 aa6.22□□□□□ -1.41
HMBOX1-215ENST00000560599 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
HMBOX1-215ENST00000560599 INE1O15225 51 aa6.17□□□□□ -1.42
HMBOX1-215ENST00000560599 MACF1Q9UPN3 7388 aaKnown RBP6.15□□□□□ -1.43
HMBOX1-215ENST00000560599 MUC12Q9UKN1 5478 aa6.14□□□□□ -1.43
HMBOX1-215ENST00000560599 LOC100996750A0A140TA64 210 aa6.1□□□□□ -1.43
HMBOX1-215ENST00000560599 LCE1AQ5T7P2 110 aa6.07□□□□□ -1.44
HMBOX1-215ENST00000560599 SPRR2EP22531 72 aa6.01□□□□□ -1.45
HMBOX1-215ENST00000560599 SPRR2BP35325 72 aa6.01□□□□□ -1.45
HMBOX1-215ENST00000560599 SPRR2AP35326 72 aa6.01□□□□□ -1.45
HMBOX1-215ENST00000560599 KRTAP6-3Q3LI67 103 aa5.94□□□□□ -1.46
HMBOX1-215ENST00000560599 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.93□□□□□ -1.46
HMBOX1-215ENST00000560599 KRTAP9-6A0A140TA67 174 aa5.91□□□□□ -1.46
HMBOX1-215ENST00000560599 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
HMBOX1-215ENST00000560599 SPRR2DP22532 72 aa5.78□□□□□ -1.48
HMBOX1-215ENST00000560599 MT1AP04731 61 aa5.76□□□□□ -1.49
HMBOX1-215ENST00000560599 MDN1Q9NU22 5596 aa5.75□□□□□ -1.49
HMBOX1-215ENST00000560599 KRTAP5-5Q701N2 237 aaPredicted RBP5.73□□□□□ -1.49
HMBOX1-215ENST00000560599 KRTAP6-1Q3LI64 71 aa5.66□□□□□ -1.5
HMBOX1-215ENST00000560599 LCE3BQ5TA77 95 aa5.62□□□□□ -1.51
HMBOX1-215ENST00000560599 DSTQ03001 7570 aaKnown RBP5.55□□□□□ -1.52
HMBOX1-215ENST00000560599 KRTAP4-6Q9BYQ5 205 aa5.48□□□□□ -1.53
HMBOX1-215ENST00000560599 KRTAP9-7A8MTY7 169 aa5.46□□□□□ -1.54
HMBOX1-215ENST00000560599 KRTAP9-4Q9BYQ2 154 aa5.41□□□□□ -1.54
HMBOX1-215ENST00000560599 NEBP20929 6669 aa5.36□□□□□ -1.55
HMBOX1-215ENST00000560599 KRTAP12-4P60329 112 aa5.31□□□□□ -1.56
HMBOX1-215ENST00000560599 KRTAP4-9Q9BYQ8 210 aa5.31□□□□□ -1.56
HMBOX1-215ENST00000560599 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
HMBOX1-215ENST00000560599 SYNE1Q8NF91 8797 aaKnown RBP5.28□□□□□ -1.56
HMBOX1-215ENST00000560599 LCE3DQ9BYE3 92 aa5.23□□□□□ -1.57
HMBOX1-215ENST00000560599 MT3P25713 68 aa5.2□□□□□ -1.58
HMBOX1-215ENST00000560599 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.58
HMBOX1-215ENST00000560599 LCE3EQ5T5B0 92 aa5.15□□□□□ -1.58
HMBOX1-215ENST00000560599 LCE4AQ5TA78 99 aa5.14□□□□□ -1.59
HMBOX1-215ENST00000560599 KRTAP2-2Q9BYT5 123 aa5.02□□□□□ -1.61
HMBOX1-215ENST00000560599 KRTAP4-12Q9BQ66 201 aa4.99□□□□□ -1.61
HMBOX1-215ENST00000560599 MT4P47944 62 aa4.97□□□□□ -1.61
HMBOX1-215ENST00000560599 KRTAP20-2Q3LI61 65 aa4.94□□□□□ -1.62
HMBOX1-215ENST00000560599 KRTAP20-1Q3LI63 56 aa4.93□□□□□ -1.62
HMBOX1-215ENST00000560599 KRTAP5-2Q701N4 177 aa4.88□□□□□ -1.63
HMBOX1-215ENST00000560599 LCE1DQ5T752 114 aa4.82□□□□□ -1.64
HMBOX1-215ENST00000560599 KRTAP9-9Q9BYP9 154 aa4.78□□□□□ -1.64
HMBOX1-215ENST00000560599 KRTAP5-3Q6L8H2 238 aa4.72□□□□□ -1.65
HMBOX1-215ENST00000560599 HMCN1Q96RW7 5635 aa4.68□□□□□ -1.66
HMBOX1-215ENST00000560599 PRM1P04553 51 aa4.67□□□□□ -1.66
HMBOX1-215ENST00000560599 OBSCNQ5VST9 7968 aa4.49□□□□□ -1.69
HMBOX1-215ENST00000560599 LCE1EQ5T753 118 aa4.4□□□□□ -1.7
HMBOX1-215ENST00000560599 KRTAP4-11Q9BYQ6 195 aa4.29□□□□□ -1.72
HMBOX1-215ENST00000560599 KRTAP4-2Q9BYR5 136 aa4.27□□□□□ -1.73
HMBOX1-215ENST00000560599 KRTAP5-10Q6L8G5 202 aa4.15□□□□□ -1.74
HMBOX1-215ENST00000560599 LCE1BQ5T7P3 118 aa4.14□□□□□ -1.75
HMBOX1-215ENST00000560599 MUC5ACP98088 5654 aa4.14□□□□□ -1.75
HMBOX1-215ENST00000560599 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
HMBOX1-215ENST00000560599 LCE1CQ5T751 118 aa4.1□□□□□ -1.75
HMBOX1-215ENST00000560599 AHNAK2Q8IVF2 5795 aa4.03□□□□□ -1.76
HMBOX1-215ENST00000560599 KRTAP5-8O75690 187 aa4□□□□□ -1.77
HMBOX1-215ENST00000560599 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
HMBOX1-215ENST00000560599 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.88□□□□□ -1.79
HMBOX1-215ENST00000560599 KRTAP21-2Q3LI59 83 aa3.69□□□□□ -1.82
HMBOX1-215ENST00000560599 KRTAP5-11Q6L8G4 156 aa3.61□□□□□ -1.83
HMBOX1-215ENST00000560599 MUC5BQ9HC84 5762 aaPredicted RBP3.46□□□□□ -1.86
HMBOX1-215ENST00000560599 GPR98Q8WXG9 6306 aa3.42□□□□□ -1.86
HMBOX1-215ENST00000560599 KRTAP4-4Q9BYR3 166 aa3.24□□□□□ -1.89
HMBOX1-215ENST00000560599 LCE1FQ5T754 118 aa3.15□□□□□ -1.91
HMBOX1-215ENST00000560599 PHGR1C9JFL3 82 aa3.06□□□□□ -1.92
HMBOX1-215ENST00000560599 AHNAKQ09666 5890 aaKnown RBP2.93□□□□□ -1.94
HMBOX1-215ENST00000560599 KRTAP21-1Q3LI58 79 aa2.92□□□□□ -1.94
HMBOX1-215ENST00000560599 MUC19Q7Z5P9 8384 aa2.6□□□□□ -1.99
HMBOX1-215ENST00000560599 MUC16Q8WXI7 14507 aa2.06□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 101 ms