RNA–Protein interactions for RNA: ENST00000560588.5

RMDN3-209, Transcript of regulator of microtubule dynamics 3, humanhuman

TSL 2

Gene RMDN3, Length 2,202 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN3-209ENST00000560588 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.84
RMDN3-209ENST00000560588 KMT2DO14686 5537 aa3.56□□□□□ -1.84
RMDN3-209ENST00000560588 KRTAP9-6A8MVA2 160 aa3.54□□□□□ -1.84
RMDN3-209ENST00000560588 KRTAP9-7A8MTY7 169 aa3.53□□□□□ -1.84
RMDN3-209ENST00000560588 KRTAP2-3P0C7H8 128 aa3.49□□□□□ -1.85
RMDN3-209ENST00000560588 KRTAP4-7Q9BYR0 210 aa3.49□□□□□ -1.85
RMDN3-209ENST00000560588 KRTAP2-4Q9BYR9 128 aa3.49□□□□□ -1.85
RMDN3-209ENST00000560588 KRTAP2-1Q9BYU5 128 aa3.49□□□□□ -1.85
RMDN3-209ENST00000560588 MT1GP13640 62 aa3.44□□□□□ -1.86
RMDN3-209ENST00000560588 KRTAP19-3Q7Z4W3 81 aa3.43□□□□□ -1.86
RMDN3-209ENST00000560588 FCGBPQ9Y6R7 5405 aaPredicted RBP3.42□□□□□ -1.86
RMDN3-209ENST00000560588 MT1MQ8N339 61 aa3.4□□□□□ -1.86
RMDN3-209ENST00000560588 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.37□□□□□ -1.87
RMDN3-209ENST00000560588 MACF1Q9UPN3 7388 aaKnown RBP3.35□□□□□ -1.87
RMDN3-209ENST00000560588 KRTAP5-3Q6L8H2 238 aa3.34□□□□□ -1.87
RMDN3-209ENST00000560588 LCE5AQ5TCM9 118 aa3.32□□□□□ -1.88
RMDN3-209ENST00000560588 SPRR2FQ96RM1 72 aa3.31□□□□□ -1.88
RMDN3-209ENST00000560588 KRTAP4-3Q9BYR4 195 aa3.31□□□□□ -1.88
RMDN3-209ENST00000560588 SYNE2Q8WXH0 6885 aaKnown RBP3.29□□□□□ -1.88
RMDN3-209ENST00000560588 MUC12Q9UKN1 5478 aa3.23□□□□□ -1.89
RMDN3-209ENST00000560588 GPR98Q8WXG9 6306 aa3.2□□□□□ -1.9
RMDN3-209ENST00000560588 KRTAP9-4Q9BYQ2 154 aa3.2□□□□□ -1.9
RMDN3-209ENST00000560588 KRTAP5-9P26371 169 aa3.17□□□□□ -1.9
RMDN3-209ENST00000560588 MDN1Q9NU22 5596 aa3.13□□□□□ -1.91
RMDN3-209ENST00000560588 LCE1AQ5T7P2 110 aa3.12□□□□□ -1.91
RMDN3-209ENST00000560588 NEBP20929 6669 aa3.11□□□□□ -1.91
RMDN3-209ENST00000560588 MT1AP04731 61 aa3.09□□□□□ -1.91
RMDN3-209ENST00000560588 KRTAP9-9Q9BYP9 154 aa3.08□□□□□ -1.92
RMDN3-209ENST00000560588 SPRR2EP22531 72 aa3.06□□□□□ -1.92
RMDN3-209ENST00000560588 SPRR2BP35325 72 aa3.06□□□□□ -1.92
RMDN3-209ENST00000560588 SPRR2AP35326 72 aa3.06□□□□□ -1.92
RMDN3-209ENST00000560588 DSTQ03001 7570 aaKnown RBP3.06□□□□□ -1.92
RMDN3-209ENST00000560588 KRTAP6-1Q3LI64 71 aa3.03□□□□□ -1.93
RMDN3-209ENST00000560588 LCE3BQ5TA77 95 aa3.03□□□□□ -1.93
RMDN3-209ENST00000560588 KRTAP5-5Q701N2 237 aaPredicted RBP3.03□□□□□ -1.93
RMDN3-209ENST00000560588 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
RMDN3-209ENST00000560588 KRTAP20-1Q3LI63 56 aa3.01□□□□□ -1.93
RMDN3-209ENST00000560588 LCE4AQ5TA78 99 aa2.99□□□□□ -1.93
RMDN3-209ENST00000560588 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
RMDN3-209ENST00000560588 SPRR2DP22532 72 aa2.95□□□□□ -1.94
RMDN3-209ENST00000560588 LCE3DQ9BYE3 92 aa2.91□□□□□ -1.94
RMDN3-209ENST00000560588 MT3P25713 68 aa2.9□□□□□ -1.95
RMDN3-209ENST00000560588 KRTAP4-2Q9BYR5 136 aa2.9□□□□□ -1.95
RMDN3-209ENST00000560588 KRTAP4-12Q9BQ66 201 aa2.88□□□□□ -1.95
RMDN3-209ENST00000560588 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
RMDN3-209ENST00000560588 KRTAP4-9Q9BYQ8 210 aa2.87□□□□□ -1.95
RMDN3-209ENST00000560588 SYNE1Q8NF91 8797 aaKnown RBP2.79□□□□□ -1.96
RMDN3-209ENST00000560588 KRTAP2-2Q9BYT5 123 aa2.77□□□□□ -1.97
RMDN3-209ENST00000560588 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
RMDN3-209ENST00000560588 LCE1DQ5T752 114 aa2.75□□□□□ -1.97
RMDN3-209ENST00000560588 KRTAP6-2Q3LI66 62 aa2.73□□□□□ -1.97
RMDN3-209ENST00000560588 KRTAP5-4Q6L8H1 288 aa2.73□□□□□ -1.97
RMDN3-209ENST00000560588 PRM1P04553 51 aa2.64□□□□□ -1.99
RMDN3-209ENST00000560588 MUC5BQ9HC84 5762 aaPredicted RBP2.56□□□□□ -2
RMDN3-209ENST00000560588 AHNAK2Q8IVF2 5795 aa2.55□□□□□ -2
RMDN3-209ENST00000560588 KRTAP5-2Q701N4 177 aa2.55□□□□□ -2
RMDN3-209ENST00000560588 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
RMDN3-209ENST00000560588 KRTAP20-2Q3LI61 65 aa2.54□□□□□ -2
RMDN3-209ENST00000560588 KRTAP5-7Q6L8G8 165 aa2.53□□□□□ -2
RMDN3-209ENST00000560588 KRTAP4-11Q9BYQ6 195 aa2.53□□□□□ -2
RMDN3-209ENST00000560588 MT4P47944 62 aa2.52□□□□□ -2.01
RMDN3-209ENST00000560588 OBSCNQ5VST9 7968 aa2.51□□□□□ -2.01
RMDN3-209ENST00000560588 HMCN1Q96RW7 5635 aa2.46□□□□□ -2.02
RMDN3-209ENST00000560588 KRTAP5-10Q6L8G5 202 aa2.4□□□□□ -2.03
RMDN3-209ENST00000560588 LCE1EQ5T753 118 aa2.35□□□□□ -2.03
RMDN3-209ENST00000560588 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.3□□□□□ -2.04
RMDN3-209ENST00000560588 MUC5ACP98088 5654 aa2.24□□□□□ -2.05
RMDN3-209ENST00000560588 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
RMDN3-209ENST00000560588 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
RMDN3-209ENST00000560588 KRTAP5-1Q6L8H4 278 aa2.14□□□□□ -2.07
RMDN3-209ENST00000560588 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
RMDN3-209ENST00000560588 KRTAP21-2Q3LI59 83 aa1.97□□□□□ -2.09
RMDN3-209ENST00000560588 KRTAP5-11Q6L8G4 156 aa1.89□□□□□ -2.11
RMDN3-209ENST00000560588 KRTAP4-4Q9BYR3 166 aa1.83□□□□□ -2.12
RMDN3-209ENST00000560588 KRTAP21-1Q3LI58 79 aa1.69□□□□□ -2.14
RMDN3-209ENST00000560588 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
RMDN3-209ENST00000560588 MUC19Q7Z5P9 8384 aa1.48□□□□□ -2.17
RMDN3-209ENST00000560588 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 78 of 20,778 RNA–protein pairs in 116.1 ms