RNA–Protein interactions for RNA: ENST00000560555.1

ALDH1A3-206, Transcript of aldehyde dehydrogenase 1 family member A3, humanhuman

TSL 1 (best)

Gene ALDH1A3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALDH1A3-206ENST00000560555 LCE5AQ5TCM9 118 aa4.47□□□□□ -1.69
ALDH1A3-206ENST00000560555 PSPHP1O15172 72 aa4.46□□□□□ -1.7
ALDH1A3-206ENST00000560555 PCP4P48539 62 aa4.46□□□□□ -1.7
ALDH1A3-206ENST00000560555 LCE3AQ5TA76 89 aa4.44□□□□□ -1.7
ALDH1A3-206ENST00000560555 AHNAK2Q8IVF2 5795 aa4.44□□□□□ -1.7
ALDH1A3-206ENST00000560555 MIR22HGQ0VDD5 57 aa4.43□□□□□ -1.7
ALDH1A3-206ENST00000560555 KRTAP19-4Q3LI73 84 aa4.43□□□□□ -1.7
ALDH1A3-206ENST00000560555 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
ALDH1A3-206ENST00000560555 HMCN1Q96RW7 5635 aa4.42□□□□□ -1.7
ALDH1A3-206ENST00000560555 RPS28P62857 69 aaKnown RBP4.41□□□□□ -1.7
ALDH1A3-206ENST00000560555 KRTAP5-7Q6L8G8 165 aa4.41□□□□□ -1.7
ALDH1A3-206ENST00000560555 TNP1P09430 55 aa4.4□□□□□ -1.71
ALDH1A3-206ENST00000560555 MT4P47944 62 aa4.4□□□□□ -1.71
ALDH1A3-206ENST00000560555 V9GYY9 64 aa4.4□□□□□ -1.71
ALDH1A3-206ENST00000560555 MT1LQ93083 61 aa4.35□□□□□ -1.71
ALDH1A3-206ENST00000560555 MT1GP13640 62 aa4.34□□□□□ -1.71
ALDH1A3-206ENST00000560555 LCE4AQ5TA78 99 aa4.33□□□□□ -1.72
ALDH1A3-206ENST00000560555 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
ALDH1A3-206ENST00000560555 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
ALDH1A3-206ENST00000560555 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
ALDH1A3-206ENST00000560555 MT1MQ8N339 61 aa4.3□□□□□ -1.72
ALDH1A3-206ENST00000560555 KRTAP4-3Q9BYR4 195 aa4.26□□□□□ -1.73
ALDH1A3-206ENST00000560555 KRTAP5-3Q6L8H2 238 aa4.25□□□□□ -1.73
ALDH1A3-206ENST00000560555 A6NED7 52 aa4.24□□□□□ -1.73
ALDH1A3-206ENST00000560555 KRTAP12-3P60328 96 aa4.24□□□□□ -1.73
ALDH1A3-206ENST00000560555 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
ALDH1A3-206ENST00000560555 KRTAP4-7Q9BYR0 210 aa4.21□□□□□ -1.74
ALDH1A3-206ENST00000560555 K7ERS5 55 aa4.18□□□□□ -1.74
ALDH1A3-206ENST00000560555 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
ALDH1A3-206ENST00000560555 KRTAP5-4Q6L8H1 288 aa4.16□□□□□ -1.74
ALDH1A3-206ENST00000560555 KRTAP23-1A1A580 65 aa4.13□□□□□ -1.75
ALDH1A3-206ENST00000560555 CDC42SE1Q9NRR8 79 aa4.12□□□□□ -1.75
ALDH1A3-206ENST00000560555 ROMO1P60602 79 aa4.06□□□□□ -1.76
ALDH1A3-206ENST00000560555 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
ALDH1A3-206ENST00000560555 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
ALDH1A3-206ENST00000560555 KRTAP20-2Q3LI61 65 aa3.97□□□□□ -1.77
ALDH1A3-206ENST00000560555 LCE3CQ5T5A8 94 aa3.94□□□□□ -1.78
ALDH1A3-206ENST00000560555 KRTAP4-11Q9BYQ6 195 aa3.9□□□□□ -1.79
ALDH1A3-206ENST00000560555 KRTAP4-2Q9BYR5 136 aa3.86□□□□□ -1.79
ALDH1A3-206ENST00000560555 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
ALDH1A3-206ENST00000560555 KRTAP9-6A8MVA2 160 aa3.84□□□□□ -1.79
ALDH1A3-206ENST00000560555 AHNAKQ09666 5890 aaKnown RBP3.8□□□□□ -1.8
ALDH1A3-206ENST00000560555 MUC5ACP98088 5654 aa3.78□□□□□ -1.8
ALDH1A3-206ENST00000560555 BRK1Q8WUW1 75 aa3.78□□□□□ -1.8
ALDH1A3-206ENST00000560555 KRTAP12-4P60329 112 aa3.77□□□□□ -1.81
ALDH1A3-206ENST00000560555 KRTAP5-8O75690 187 aa3.7□□□□□ -1.82
ALDH1A3-206ENST00000560555 KRTAP6-1Q3LI64 71 aa3.7□□□□□ -1.82
ALDH1A3-206ENST00000560555 MUC5BQ9HC84 5762 aaPredicted RBP3.7□□□□□ -1.82
ALDH1A3-206ENST00000560555 MT1AP04731 61 aa3.69□□□□□ -1.82
ALDH1A3-206ENST00000560555 KRTAP5-2Q701N4 177 aa3.58□□□□□ -1.84
ALDH1A3-206ENST00000560555 PMAIP1Q13794 54 aa3.57□□□□□ -1.84
ALDH1A3-206ENST00000560555 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
ALDH1A3-206ENST00000560555 KRTAP6-2Q3LI66 62 aa3.47□□□□□ -1.85
ALDH1A3-206ENST00000560555 OBSCNQ5VST9 7968 aa3.42□□□□□ -1.86
ALDH1A3-206ENST00000560555 PRO0628Q9UI54 55 aa3.41□□□□□ -1.86
ALDH1A3-206ENST00000560555 SVIPQ8NHG7 77 aa3.34□□□□□ -1.87
ALDH1A3-206ENST00000560555 MT3P25713 68 aa3.32□□□□□ -1.88
ALDH1A3-206ENST00000560555 KRTAP5-1Q6L8H4 278 aa3.29□□□□□ -1.88
ALDH1A3-206ENST00000560555 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
ALDH1A3-206ENST00000560555 A0A0A0MQY5 61 aa3.1□□□□□ -1.91
ALDH1A3-206ENST00000560555 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
ALDH1A3-206ENST00000560555 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
ALDH1A3-206ENST00000560555 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
ALDH1A3-206ENST00000560555 LCE3DQ9BYE3 92 aa2.83□□□□□ -1.96
ALDH1A3-206ENST00000560555 LUZP6Q538Z0 58 aa2.74□□□□□ -1.97
ALDH1A3-206ENST00000560555 LCE3EQ5T5B0 92 aa2.69□□□□□ -1.98
ALDH1A3-206ENST00000560555 PHGR1C9JFL3 82 aa2.65□□□□□ -1.99
ALDH1A3-206ENST00000560555 KRTAP5-11Q6L8G4 156 aa2.65□□□□□ -1.99
ALDH1A3-206ENST00000560555 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.63□□□□□ -1.99
ALDH1A3-206ENST00000560555 LCE1FQ5T754 118 aa2.58□□□□□ -2
ALDH1A3-206ENST00000560555 NDUFAF8A1L188 74 aa2.56□□□□□ -2
ALDH1A3-206ENST00000560555 KRTAP21-2Q3LI59 83 aa2.47□□□□□ -2.01
ALDH1A3-206ENST00000560555 KRTAP4-4Q9BYR3 166 aa2.21□□□□□ -2.06
ALDH1A3-206ENST00000560555 MUC19Q7Z5P9 8384 aa2.15□□□□□ -2.07
ALDH1A3-206ENST00000560555 PRM1P04553 51 aa2.11□□□□□ -2.07
ALDH1A3-206ENST00000560555 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
ALDH1A3-206ENST00000560555 INE1O15225 51 aa1.89□□□□□ -2.11
ALDH1A3-206ENST00000560555 MUC16Q8WXI7 14507 aa1.54□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 51.7 ms