RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 KMT2DO14686 5537 aa3.3□□□□□ -1.88
TRAF3-209ENST00000560463 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
TRAF3-209ENST00000560463 KRTAP4-9Q9BYQ8 210 aa3.28□□□□□ -1.88
TRAF3-209ENST00000560463 MACF1Q9UPN3 7388 aaKnown RBP3.23□□□□□ -1.89
TRAF3-209ENST00000560463 KRTAP12-3P60328 96 aa3.22□□□□□ -1.89
TRAF3-209ENST00000560463 KRTAP4-11Q9BYQ6 195 aa3.21□□□□□ -1.9
TRAF3-209ENST00000560463 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
TRAF3-209ENST00000560463 KRTAP19-7Q3SYF9 63 aa3.18□□□□□ -1.9
TRAF3-209ENST00000560463 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
TRAF3-209ENST00000560463 MT1EP04732 61 aa3.14□□□□□ -1.91
TRAF3-209ENST00000560463 KRTAP5-9P26371 169 aa3.14□□□□□ -1.91
TRAF3-209ENST00000560463 KRTAP4-2Q9BYR5 136 aa3.14□□□□□ -1.91
TRAF3-209ENST00000560463 SPRR2FQ96RM1 72 aa3.12□□□□□ -1.91
TRAF3-209ENST00000560463 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
TRAF3-209ENST00000560463 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.91
TRAF3-209ENST00000560463 MT1LQ93083 61 aa3.07□□□□□ -1.92
TRAF3-209ENST00000560463 MUC12Q9UKN1 5478 aa3.05□□□□□ -1.92
TRAF3-209ENST00000560463 KRTAP19-3Q7Z4W3 81 aa3.04□□□□□ -1.92
TRAF3-209ENST00000560463 MT1GP13640 62 aa3.03□□□□□ -1.92
TRAF3-209ENST00000560463 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
TRAF3-209ENST00000560463 LCE1AQ5T7P2 110 aa2.99□□□□□ -1.93
TRAF3-209ENST00000560463 SPRR2EP22531 72 aa2.98□□□□□ -1.93
TRAF3-209ENST00000560463 SPRR2BP35325 72 aa2.98□□□□□ -1.93
TRAF3-209ENST00000560463 SPRR2AP35326 72 aa2.98□□□□□ -1.93
TRAF3-209ENST00000560463 SPRR5A0A1B0GTR4 108 aa2.96□□□□□ -1.94
TRAF3-209ENST00000560463 MT1MQ8N339 61 aa2.96□□□□□ -1.94
TRAF3-209ENST00000560463 MDN1Q9NU22 5596 aa2.95□□□□□ -1.94
TRAF3-209ENST00000560463 SPRR2DP22532 72 aa2.88□□□□□ -1.95
TRAF3-209ENST00000560463 KRTAP4-3Q9BYR4 195 aa2.85□□□□□ -1.95
TRAF3-209ENST00000560463 DSTQ03001 7570 aaKnown RBP2.84□□□□□ -1.95
TRAF3-209ENST00000560463 LUZP6Q538Z0 58 aa2.84□□□□□ -1.95
TRAF3-209ENST00000560463 NEBP20929 6669 aa2.83□□□□□ -1.96
TRAF3-209ENST00000560463 KRTAP9-6A8MVA2 160 aa2.8□□□□□ -1.96
TRAF3-209ENST00000560463 KRTAP2-3P0C7H8 128 aa2.74□□□□□ -1.97
TRAF3-209ENST00000560463 KRTAP2-4Q9BYR9 128 aa2.74□□□□□ -1.97
TRAF3-209ENST00000560463 KRTAP20-1Q3LI63 56 aa2.69□□□□□ -1.98
TRAF3-209ENST00000560463 KRTAP5-5Q701N2 237 aaPredicted RBP2.68□□□□□ -1.98
TRAF3-209ENST00000560463 KRTAP2-2Q9BYT5 123 aa2.68□□□□□ -1.98
TRAF3-209ENST00000560463 KRTAP2-1Q9BYU5 128 aa2.68□□□□□ -1.98
TRAF3-209ENST00000560463 NDUFAF8A1L188 74 aa2.67□□□□□ -1.98
TRAF3-209ENST00000560463 MT3P25713 68 aa2.65□□□□□ -1.99
TRAF3-209ENST00000560463 KRTAP5-3Q6L8H2 238 aa2.65□□□□□ -1.99
TRAF3-209ENST00000560463 MT1AP04731 61 aa2.62□□□□□ -1.99
TRAF3-209ENST00000560463 KRTAP5-4Q6L8H1 288 aa2.61□□□□□ -1.99
TRAF3-209ENST00000560463 KRTAP6-1Q3LI64 71 aa2.57□□□□□ -2
TRAF3-209ENST00000560463 KRTAP12-4P60329 112 aa2.53□□□□□ -2
TRAF3-209ENST00000560463 SYNE1Q8NF91 8797 aaKnown RBP2.52□□□□□ -2.01
TRAF3-209ENST00000560463 MT4P47944 62 aa2.47□□□□□ -2.01
TRAF3-209ENST00000560463 KRTAP20-2Q3LI61 65 aa2.42□□□□□ -2.02
TRAF3-209ENST00000560463 HMCN1Q96RW7 5635 aa2.4□□□□□ -2.03
TRAF3-209ENST00000560463 KRTAP6-2Q3LI66 62 aa2.38□□□□□ -2.03
TRAF3-209ENST00000560463 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
TRAF3-209ENST00000560463 LCE1FQ5T754 118 aa2.34□□□□□ -2.03
TRAF3-209ENST00000560463 INE1O15225 51 aa2.27□□□□□ -2.05
TRAF3-209ENST00000560463 LCE1EQ5T753 118 aa2.26□□□□□ -2.05
TRAF3-209ENST00000560463 LCE3DQ9BYE3 92 aa2.26□□□□□ -2.05
TRAF3-209ENST00000560463 LCE3EQ5T5B0 92 aa2.19□□□□□ -2.06
TRAF3-209ENST00000560463 OBSCNQ5VST9 7968 aa2.17□□□□□ -2.06
TRAF3-209ENST00000560463 AHNAK2Q8IVF2 5795 aa2.17□□□□□ -2.06
TRAF3-209ENST00000560463 KRTAP5-11Q6L8G4 156 aa2.14□□□□□ -2.07
TRAF3-209ENST00000560463 KRTAP5-10Q6L8G5 202 aa2.08□□□□□ -2.08
TRAF3-209ENST00000560463 KRTAP5-8O75690 187 aa2.04□□□□□ -2.08
TRAF3-209ENST00000560463 KRTAP5-1Q6L8H4 278 aa2.03□□□□□ -2.08
TRAF3-209ENST00000560463 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.02□□□□□ -2.09
TRAF3-209ENST00000560463 KRTAP5-7Q6L8G8 165 aa1.99□□□□□ -2.09
TRAF3-209ENST00000560463 MUC5ACP98088 5654 aa1.97□□□□□ -2.09
TRAF3-209ENST00000560463 LCE1CQ5T751 118 aa1.96□□□□□ -2.1
TRAF3-209ENST00000560463 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
TRAF3-209ENST00000560463 GPR98Q8WXG9 6306 aa1.93□□□□□ -2.1
TRAF3-209ENST00000560463 PRM1P04553 51 aa1.85□□□□□ -2.11
TRAF3-209ENST00000560463 MUC5BQ9HC84 5762 aaPredicted RBP1.79□□□□□ -2.12
TRAF3-209ENST00000560463 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
TRAF3-209ENST00000560463 KRTAP4-4Q9BYR3 166 aa1.67□□□□□ -2.14
TRAF3-209ENST00000560463 AHNAKQ09666 5890 aaKnown RBP1.64□□□□□ -2.15
TRAF3-209ENST00000560463 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
TRAF3-209ENST00000560463 MUC19Q7Z5P9 8384 aa1.33□□□□□ -2.2
TRAF3-209ENST00000560463 KRTAP21-1Q3LI58 79 aa1.14□□□□□ -2.23
TRAF3-209ENST00000560463 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 80.2 ms