RNA–Protein interactions for RNA: ENST00000560336.6

LINC00520-206, long intergenic non-protein coding RNA 520, humanhuman

TSL 3 BASIC

Gene LINC00520, Length 883 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00520-206ENST00000560336 A6NN06 94 aa3.47□□□□□ -1.85
LINC00520-206ENST00000560336 KRTAP12-1P59990 96 aa3.47□□□□□ -1.85
LINC00520-206ENST00000560336 KRTAP5-5Q701N2 237 aaPredicted RBP3.43□□□□□ -1.86
LINC00520-206ENST00000560336 SPRR2GQ9BYE4 73 aa3.43□□□□□ -1.86
LINC00520-206ENST00000560336 PLAC4Q8WY50 150 aa3.4□□□□□ -1.87
LINC00520-206ENST00000560336 CAMK2N1Q7Z7J9 78 aa3.39□□□□□ -1.87
LINC00520-206ENST00000560336 ROMO1P60602 79 aa3.37□□□□□ -1.87
LINC00520-206ENST00000560336 KTN1-AS1Q86SY8 53 aa3.37□□□□□ -1.87
LINC00520-206ENST00000560336 KRTAP19-8Q3LI54 63 aa3.34□□□□□ -1.87
LINC00520-206ENST00000560336 MT1BP07438 61 aa3.3□□□□□ -1.88
LINC00520-206ENST00000560336 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
LINC00520-206ENST00000560336 LCE3DQ9BYE3 92 aa3.27□□□□□ -1.89
LINC00520-206ENST00000560336 KRTAP5-2Q701N4 177 aa3.24□□□□□ -1.89
LINC00520-206ENST00000560336 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
LINC00520-206ENST00000560336 LCE1BQ5T7P3 118 aa3.23□□□□□ -1.89
LINC00520-206ENST00000560336 KRTAP25-1Q3LHN0 102 aa3.22□□□□□ -1.89
LINC00520-206ENST00000560336 TNP1P09430 55 aa3.21□□□□□ -1.9
LINC00520-206ENST00000560336 PRO2289Q9P1D8 64 aa3.21□□□□□ -1.9
LINC00520-206ENST00000560336 MT1XP80297 61 aa3.19□□□□□ -1.9
LINC00520-206ENST00000560336 PP632Q6XCG6 107 aa3.16□□□□□ -1.9
LINC00520-206ENST00000560336 KRTAP19-6Q3LI70 58 aa3.08□□□□□ -1.92
LINC00520-206ENST00000560336 USH2AO75445 5202 aa3.07□□□□□ -1.92
LINC00520-206ENST00000560336 SSPOA2VEC9 5147 aa3.02□□□□□ -1.93
LINC00520-206ENST00000560336 KRTAP8-1Q8IUC2 63 aa2.96□□□□□ -1.94
LINC00520-206ENST00000560336 CRCT1Q9UGL9 99 aa2.95□□□□□ -1.94
LINC00520-206ENST00000560336 KRTAP12-3P60328 96 aa2.92□□□□□ -1.94
LINC00520-206ENST00000560336 KRTAP19-5Q3LI72 72 aa2.91□□□□□ -1.94
LINC00520-206ENST00000560336 SPRR5A0A1B0GTR4 108 aa2.89□□□□□ -1.95
LINC00520-206ENST00000560336 FSIP2Q5CZC0 6907 aa2.87□□□□□ -1.95
LINC00520-206ENST00000560336 KRTAP19-7Q3SYF9 63 aa2.84□□□□□ -1.95
LINC00520-206ENST00000560336 FCGBPQ9Y6R7 5405 aaPredicted RBP2.84□□□□□ -1.95
LINC00520-206ENST00000560336 MT1EP04732 61 aa2.8□□□□□ -1.96
LINC00520-206ENST00000560336 KMT2DO14686 5537 aa2.8□□□□□ -1.96
LINC00520-206ENST00000560336 SPRR2FQ96RM1 72 aa2.77□□□□□ -1.97
LINC00520-206ENST00000560336 MT1LQ93083 61 aa2.75□□□□□ -1.97
LINC00520-206ENST00000560336 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
LINC00520-206ENST00000560336 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
LINC00520-206ENST00000560336 KRTAP19-3Q7Z4W3 81 aa2.7□□□□□ -1.98
LINC00520-206ENST00000560336 MT1GP13640 62 aa2.68□□□□□ -1.98
LINC00520-206ENST00000560336 KRTAP5-7Q6L8G8 165 aa2.68□□□□□ -1.98
LINC00520-206ENST00000560336 MACF1Q9UPN3 7388 aaKnown RBP2.67□□□□□ -1.98
LINC00520-206ENST00000560336 KRTAP6-3Q3LI67 103 aa2.66□□□□□ -1.98
LINC00520-206ENST00000560336 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
LINC00520-206ENST00000560336 MT1MQ8N339 61 aa2.65□□□□□ -1.99
LINC00520-206ENST00000560336 SPRR2EP22531 72 aa2.64□□□□□ -1.99
LINC00520-206ENST00000560336 SPRR2BP35325 72 aa2.64□□□□□ -1.99
LINC00520-206ENST00000560336 SPRR2AP35326 72 aa2.64□□□□□ -1.99
LINC00520-206ENST00000560336 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
LINC00520-206ENST00000560336 MUC12Q9UKN1 5478 aa2.58□□□□□ -2
LINC00520-206ENST00000560336 SPRR2DP22532 72 aa2.55□□□□□ -2
LINC00520-206ENST00000560336 SYNE2Q8WXH0 6885 aaKnown RBP2.53□□□□□ -2
LINC00520-206ENST00000560336 MDN1Q9NU22 5596 aa2.4□□□□□ -2.03
LINC00520-206ENST00000560336 DSTQ03001 7570 aaKnown RBP2.37□□□□□ -2.03
LINC00520-206ENST00000560336 KRTAP2-3P0C7H8 128 aa2.36□□□□□ -2.03
LINC00520-206ENST00000560336 KRTAP2-4Q9BYR9 128 aa2.36□□□□□ -2.03
LINC00520-206ENST00000560336 KRTAP2-1Q9BYU5 128 aa2.36□□□□□ -2.03
LINC00520-206ENST00000560336 MT1AP04731 61 aa2.35□□□□□ -2.03
LINC00520-206ENST00000560336 KRTAP6-1Q3LI64 71 aa2.32□□□□□ -2.04
LINC00520-206ENST00000560336 NEBP20929 6669 aa2.31□□□□□ -2.04
LINC00520-206ENST00000560336 KRTAP12-4P60329 112 aa2.31□□□□□ -2.04
LINC00520-206ENST00000560336 KRTAP21-2Q3LI59 83 aa2.31□□□□□ -2.04
LINC00520-206ENST00000560336 KRTAP20-1Q3LI63 56 aa2.31□□□□□ -2.04
LINC00520-206ENST00000560336 MT4P47944 62 aa2.21□□□□□ -2.06
LINC00520-206ENST00000560336 INE1O15225 51 aa2.17□□□□□ -2.06
LINC00520-206ENST00000560336 KRTAP6-2Q3LI66 62 aa2.14□□□□□ -2.07
LINC00520-206ENST00000560336 SYNE1Q8NF91 8797 aaKnown RBP2.14□□□□□ -2.07
LINC00520-206ENST00000560336 KRTAP20-2Q3LI61 65 aa2.12□□□□□ -2.07
LINC00520-206ENST00000560336 AHNAK2Q8IVF2 5795 aa1.78□□□□□ -2.12
LINC00520-206ENST00000560336 PRM1P04553 51 aa1.77□□□□□ -2.13
LINC00520-206ENST00000560336 KRTAP5-10Q6L8G5 202 aa1.75□□□□□ -2.13
LINC00520-206ENST00000560336 MUC5ACP98088 5654 aa1.64□□□□□ -2.15
LINC00520-206ENST00000560336 GPR98Q8WXG9 6306 aa1.54□□□□□ -2.16
LINC00520-206ENST00000560336 MUC5BQ9HC84 5762 aaPredicted RBP1.47□□□□□ -2.17
LINC00520-206ENST00000560336 AHNAKQ09666 5890 aaKnown RBP1.28□□□□□ -2.2
LINC00520-206ENST00000560336 PHGR1C9JFL3 82 aa1.28□□□□□ -2.2
LINC00520-206ENST00000560336 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
LINC00520-206ENST00000560336 KRTAP21-1Q3LI58 79 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 141.9 ms