RNA–Protein interactions for RNA: ENST00000560089.5

SEMA4B-215, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 2,804 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-215ENST00000560089 KRTAP12-4P60329 112 aa6.44□□□□□ -1.38
SEMA4B-215ENST00000560089 MACF1Q9UPN3 7388 aaKnown RBP6.43□□□□□ -1.38
SEMA4B-215ENST00000560089 CRCT1Q9UGL9 99 aa6.39□□□□□ -1.39
SEMA4B-215ENST00000560089 SYNE2Q8WXH0 6885 aaKnown RBP6.32□□□□□ -1.4
SEMA4B-215ENST00000560089 MUC12Q9UKN1 5478 aa6.31□□□□□ -1.4
SEMA4B-215ENST00000560089 KRTAP19-7Q3SYF9 63 aa6.28□□□□□ -1.4
SEMA4B-215ENST00000560089 MT1EP04732 61 aa6.14□□□□□ -1.43
SEMA4B-215ENST00000560089 KRTAP19-4Q3LI73 84 aa6.13□□□□□ -1.43
SEMA4B-215ENST00000560089 SPRR2FQ96RM1 72 aa6.08□□□□□ -1.44
SEMA4B-215ENST00000560089 MT1LQ93083 61 aa6.07□□□□□ -1.44
SEMA4B-215ENST00000560089 KRTAP9-6A0A140TA67 174 aa6.05□□□□□ -1.44
SEMA4B-215ENST00000560089 MDN1Q9NU22 5596 aa6.04□□□□□ -1.44
SEMA4B-215ENST00000560089 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
SEMA4B-215ENST00000560089 DSTQ03001 7570 aaKnown RBP5.96□□□□□ -1.46
SEMA4B-215ENST00000560089 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.91□□□□□ -1.46
SEMA4B-215ENST00000560089 KRTAP6-3Q3LI67 103 aa5.9□□□□□ -1.47
SEMA4B-215ENST00000560089 KRTAP4-3Q9BYR4 195 aa5.89□□□□□ -1.47
SEMA4B-215ENST00000560089 KRTAP2-2Q9BYT5 123 aa5.89□□□□□ -1.47
SEMA4B-215ENST00000560089 KRTAP19-3Q7Z4W3 81 aa5.87□□□□□ -1.47
SEMA4B-215ENST00000560089 LCE1AQ5T7P2 110 aa5.85□□□□□ -1.47
SEMA4B-215ENST00000560089 PRM1P04553 51 aa5.84□□□□□ -1.48
SEMA4B-215ENST00000560089 MT1GP13640 62 aa5.83□□□□□ -1.48
SEMA4B-215ENST00000560089 KRTAP5-9P26371 169 aa5.8□□□□□ -1.48
SEMA4B-215ENST00000560089 MT1MQ8N339 61 aa5.79□□□□□ -1.48
SEMA4B-215ENST00000560089 KRTAP9-7A8MTY7 169 aa5.78□□□□□ -1.48
SEMA4B-215ENST00000560089 LCE5AQ5TCM9 118 aa5.75□□□□□ -1.49
SEMA4B-215ENST00000560089 KRTAP4-9Q9BYQ8 210 aa5.73□□□□□ -1.49
SEMA4B-215ENST00000560089 SPRR2EP22531 72 aa5.72□□□□□ -1.49
SEMA4B-215ENST00000560089 SPRR2BP35325 72 aa5.72□□□□□ -1.49
SEMA4B-215ENST00000560089 SPRR2AP35326 72 aa5.72□□□□□ -1.49
SEMA4B-215ENST00000560089 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
SEMA4B-215ENST00000560089 KRTAP5-5Q701N2 237 aaPredicted RBP5.65□□□□□ -1.5
SEMA4B-215ENST00000560089 SYNE1Q8NF91 8797 aaKnown RBP5.62□□□□□ -1.51
SEMA4B-215ENST00000560089 LCE3EQ5T5B0 92 aa5.58□□□□□ -1.52
SEMA4B-215ENST00000560089 MT1AP04731 61 aa5.57□□□□□ -1.52
SEMA4B-215ENST00000560089 LCE3DQ9BYE3 92 aa5.57□□□□□ -1.52
SEMA4B-215ENST00000560089 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
SEMA4B-215ENST00000560089 SPRR2DP22532 72 aa5.49□□□□□ -1.53
SEMA4B-215ENST00000560089 NEBP20929 6669 aa5.43□□□□□ -1.54
SEMA4B-215ENST00000560089 LCE1DQ5T752 114 aa5.33□□□□□ -1.56
SEMA4B-215ENST00000560089 KRTAP6-2Q3LI66 62 aa5.32□□□□□ -1.56
SEMA4B-215ENST00000560089 OBSCNQ5VST9 7968 aa5.24□□□□□ -1.57
SEMA4B-215ENST00000560089 KRTAP6-1Q3LI64 71 aa5.19□□□□□ -1.58
SEMA4B-215ENST00000560089 KRTAP20-1Q3LI63 56 aa4.9□□□□□ -1.62
SEMA4B-215ENST00000560089 MT4P47944 62 aa4.9□□□□□ -1.63
SEMA4B-215ENST00000560089 KRTAP5-4Q6L8H1 288 aa4.84□□□□□ -1.63
SEMA4B-215ENST00000560089 KRTAP4-6Q9BYQ5 205 aa4.84□□□□□ -1.63
SEMA4B-215ENST00000560089 KRTAP9-4Q9BYQ2 154 aa4.82□□□□□ -1.64
SEMA4B-215ENST00000560089 LCE1FQ5T754 118 aa4.79□□□□□ -1.64
SEMA4B-215ENST00000560089 HMCN1Q96RW7 5635 aa4.77□□□□□ -1.65
SEMA4B-215ENST00000560089 LCE4AQ5TA78 99 aa4.7□□□□□ -1.66
SEMA4B-215ENST00000560089 KRTAP20-2Q3LI61 65 aa4.62□□□□□ -1.67
SEMA4B-215ENST00000560089 MT3P25713 68 aa4.57□□□□□ -1.68
SEMA4B-215ENST00000560089 KRTAP5-3Q6L8H2 238 aa4.4□□□□□ -1.7
SEMA4B-215ENST00000560089 KRTAP5-2Q701N4 177 aa4.4□□□□□ -1.71
SEMA4B-215ENST00000560089 KRTAP4-11Q9BYQ6 195 aa4.33□□□□□ -1.72
SEMA4B-215ENST00000560089 MUC19Q7Z5P9 8384 aa4.17□□□□□ -1.74
SEMA4B-215ENST00000560089 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
SEMA4B-215ENST00000560089 MUC5ACP98088 5654 aa3.95□□□□□ -1.78
SEMA4B-215ENST00000560089 KRTAP5-10Q6L8G5 202 aa3.92□□□□□ -1.78
SEMA4B-215ENST00000560089 LCE1BQ5T7P3 118 aa3.91□□□□□ -1.78
SEMA4B-215ENST00000560089 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
SEMA4B-215ENST00000560089 KRTAP5-8O75690 187 aa3.84□□□□□ -1.8
SEMA4B-215ENST00000560089 KRTAP4-2Q9BYR5 136 aa3.74□□□□□ -1.81
SEMA4B-215ENST00000560089 KRTAP21-1Q3LI58 79 aa3.72□□□□□ -1.81
SEMA4B-215ENST00000560089 LCE1CQ5T751 118 aa3.72□□□□□ -1.81
SEMA4B-215ENST00000560089 GPR98Q8WXG9 6306 aa3.7□□□□□ -1.82
SEMA4B-215ENST00000560089 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SEMA4B-215ENST00000560089 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
SEMA4B-215ENST00000560089 KRTAP9-9Q9BYP9 154 aa3.42□□□□□ -1.86
SEMA4B-215ENST00000560089 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
SEMA4B-215ENST00000560089 KRTAP21-2Q3LI59 83 aa3.32□□□□□ -1.88
SEMA4B-215ENST00000560089 KRTAP4-12Q9BQ66 201 aa3.29□□□□□ -1.88
SEMA4B-215ENST00000560089 KRTAP5-11Q6L8G4 156 aa3.2□□□□□ -1.9
SEMA4B-215ENST00000560089 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
SEMA4B-215ENST00000560089 AHNAKQ09666 5890 aaKnown RBP3.01□□□□□ -1.93
SEMA4B-215ENST00000560089 PHGR1C9JFL3 82 aa2.79□□□□□ -1.96
SEMA4B-215ENST00000560089 MUC16Q8WXI7 14507 aa1.87□□□□□ -2.11
Retrieved 78 of 20,778 RNA–protein pairs in 12.9 ms