RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 KRTAP19-4Q3LI73 84 aa8.3□□□□□ -1.08
TM2D3-209ENST00000560013 SYNE2Q8WXH0 6885 aaKnown RBP8.19□□□□□ -1.1
TM2D3-209ENST00000560013 MUC12Q9UKN1 5478 aa8.17□□□□□ -1.1
TM2D3-209ENST00000560013 KRTAP5-9P26371 169 aa8.17□□□□□ -1.1
TM2D3-209ENST00000560013 KRTAP19-3Q7Z4W3 81 aa8.17□□□□□ -1.1
TM2D3-209ENST00000560013 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.14□□□□□ -1.11
TM2D3-209ENST00000560013 KRTAP4-7Q9BYR0 210 aa8.12□□□□□ -1.11
TM2D3-209ENST00000560013 MT1GP13640 62 aa8.11□□□□□ -1.11
TM2D3-209ENST00000560013 A0A0A0MQY5 61 aa8.07□□□□□ -1.12
TM2D3-209ENST00000560013 LCE5AQ5TCM9 118 aa8.02□□□□□ -1.13
TM2D3-209ENST00000560013 MT1MQ8N339 61 aa8.01□□□□□ -1.13
TM2D3-209ENST00000560013 KRTAP6-3Q3LI67 103 aa7.98□□□□□ -1.13
TM2D3-209ENST00000560013 LCE1AQ5T7P2 110 aa7.92□□□□□ -1.14
TM2D3-209ENST00000560013 KRTAP4-3Q9BYR4 195 aa7.87□□□□□ -1.15
TM2D3-209ENST00000560013 KRTAP9-6A8MVA2 160 aa7.86□□□□□ -1.15
TM2D3-209ENST00000560013 SPRR2EP22531 72 aa7.85□□□□□ -1.15
TM2D3-209ENST00000560013 SPRR2BP35325 72 aa7.85□□□□□ -1.15
TM2D3-209ENST00000560013 SPRR2AP35326 72 aa7.85□□□□□ -1.15
TM2D3-209ENST00000560013 MDN1Q9NU22 5596 aa7.84□□□□□ -1.15
TM2D3-209ENST00000560013 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
TM2D3-209ENST00000560013 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
TM2D3-209ENST00000560013 DSTQ03001 7570 aaKnown RBP7.61□□□□□ -1.19
TM2D3-209ENST00000560013 SPRR2DP22532 72 aa7.55□□□□□ -1.2
TM2D3-209ENST00000560013 INE1O15225 51 aa7.42□□□□□ -1.22
TM2D3-209ENST00000560013 NEBP20929 6669 aa7.35□□□□□ -1.23
TM2D3-209ENST00000560013 KRTAP2-3P0C7H8 128 aa7.34□□□□□ -1.23
TM2D3-209ENST00000560013 KRTAP2-4Q9BYR9 128 aa7.34□□□□□ -1.23
TM2D3-209ENST00000560013 KRTAP2-1Q9BYU5 128 aa7.34□□□□□ -1.23
TM2D3-209ENST00000560013 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
TM2D3-209ENST00000560013 KRTAP5-5Q701N2 237 aaPredicted RBP7.21□□□□□ -1.26
TM2D3-209ENST00000560013 MT1AP04731 61 aa7.09□□□□□ -1.27
TM2D3-209ENST00000560013 KRTAP6-1Q3LI64 71 aa7.04□□□□□ -1.28
TM2D3-209ENST00000560013 KRTAP5-4Q6L8H1 288 aa6.85□□□□□ -1.31
TM2D3-209ENST00000560013 KRTAP2-2Q9BYT5 123 aa6.83□□□□□ -1.32
TM2D3-209ENST00000560013 SYNE1Q8NF91 8797 aaKnown RBP6.8□□□□□ -1.32
TM2D3-209ENST00000560013 KRTAP20-1Q3LI63 56 aa6.79□□□□□ -1.32
TM2D3-209ENST00000560013 KRTAP9-4Q9BYQ2 154 aa6.75□□□□□ -1.33
TM2D3-209ENST00000560013 LCE4AQ5TA78 99 aa6.69□□□□□ -1.34
TM2D3-209ENST00000560013 KRTAP12-4P60329 112 aa6.68□□□□□ -1.34
TM2D3-209ENST00000560013 MT4P47944 62 aa6.56□□□□□ -1.36
TM2D3-209ENST00000560013 KRTAP4-6Q9BYQ5 205 aa6.53□□□□□ -1.36
TM2D3-209ENST00000560013 KRTAP4-9Q9BYQ8 210 aa6.49□□□□□ -1.37
TM2D3-209ENST00000560013 KRTAP6-2Q3LI66 62 aa6.47□□□□□ -1.37
TM2D3-209ENST00000560013 MT3P25713 68 aa6.43□□□□□ -1.38
TM2D3-209ENST00000560013 LCE1DQ5T752 114 aa6.43□□□□□ -1.38
TM2D3-209ENST00000560013 KRTAP20-2Q3LI61 65 aa6.4□□□□□ -1.39
TM2D3-209ENST00000560013 HMCN1Q96RW7 5635 aa6.28□□□□□ -1.4
TM2D3-209ENST00000560013 LCE3DQ9BYE3 92 aa6.26□□□□□ -1.41
TM2D3-209ENST00000560013 KRTAP5-2Q701N4 177 aa6.22□□□□□ -1.41
TM2D3-209ENST00000560013 KRTAP5-3Q6L8H2 238 aa6.16□□□□□ -1.42
TM2D3-209ENST00000560013 LCE3EQ5T5B0 92 aa6.09□□□□□ -1.43
TM2D3-209ENST00000560013 OBSCNQ5VST9 7968 aa5.94□□□□□ -1.46
TM2D3-209ENST00000560013 LCE1EQ5T753 118 aa5.56□□□□□ -1.52
TM2D3-209ENST00000560013 KRTAP4-11Q9BYQ6 195 aa5.53□□□□□ -1.52
TM2D3-209ENST00000560013 PRM1P04553 51 aa5.52□□□□□ -1.53
TM2D3-209ENST00000560013 AHNAK2Q8IVF2 5795 aa5.5□□□□□ -1.53
TM2D3-209ENST00000560013 KRTAP5-1Q6L8H4 278 aa5.38□□□□□ -1.55
TM2D3-209ENST00000560013 KRTAP5-8O75690 187 aa5.32□□□□□ -1.56
TM2D3-209ENST00000560013 KRTAP5-10Q6L8G5 202 aa5.27□□□□□ -1.57
TM2D3-209ENST00000560013 LCE1BQ5T7P3 118 aa5.24□□□□□ -1.57
TM2D3-209ENST00000560013 GPR98Q8WXG9 6306 aa5.2□□□□□ -1.58
TM2D3-209ENST00000560013 LCE1CQ5T751 118 aa5.19□□□□□ -1.58
TM2D3-209ENST00000560013 KRTAP4-2Q9BYR5 136 aa5.18□□□□□ -1.58
TM2D3-209ENST00000560013 KRTAP5-7Q6L8G8 165 aa5.15□□□□□ -1.58
TM2D3-209ENST00000560013 MUC5ACP98088 5654 aa5.15□□□□□ -1.58
TM2D3-209ENST00000560013 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.86□□□□□ -1.63
TM2D3-209ENST00000560013 KRTAP9-9Q9BYP9 154 aa4.77□□□□□ -1.65
TM2D3-209ENST00000560013 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
TM2D3-209ENST00000560013 KRTAP5-11Q6L8G4 156 aa4.56□□□□□ -1.68
TM2D3-209ENST00000560013 MUC5BQ9HC84 5762 aaPredicted RBP4.49□□□□□ -1.69
TM2D3-209ENST00000560013 KRTAP4-12Q9BQ66 201 aa4.35□□□□□ -1.71
TM2D3-209ENST00000560013 KRTAP4-4Q9BYR3 166 aa4.1□□□□□ -1.75
TM2D3-209ENST00000560013 LCE1FQ5T754 118 aa4.09□□□□□ -1.75
TM2D3-209ENST00000560013 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
TM2D3-209ENST00000560013 PHGR1C9JFL3 82 aa3.92□□□□□ -1.78
TM2D3-209ENST00000560013 MUC19Q7Z5P9 8384 aa3.53□□□□□ -1.84
TM2D3-209ENST00000560013 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
TM2D3-209ENST00000560013 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 50.1 ms