RNA–Protein interactions for RNA: ENST00000559850.5

RABGGTA-211, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-211ENST00000559850 MT1MQ8N339 61 aa5.26□□□□□ -1.57
RABGGTA-211ENST00000559850 Q1T7F1 81 aa5.24□□□□□ -1.57
RABGGTA-211ENST00000559850 V9GYY9 64 aa5.24□□□□□ -1.57
RABGGTA-211ENST00000559850 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
RABGGTA-211ENST00000559850 KRTAP4-3Q9BYR4 195 aa5.2□□□□□ -1.58
RABGGTA-211ENST00000559850 KRTAP4-9Q9BYQ8 210 aa5.17□□□□□ -1.58
RABGGTA-211ENST00000559850 KRTAP12-3P60328 96 aa5.16□□□□□ -1.58
RABGGTA-211ENST00000559850 K7ERS5 55 aa5.15□□□□□ -1.59
RABGGTA-211ENST00000559850 KRTAP25-1Q3LHN0 102 aa5.12□□□□□ -1.59
RABGGTA-211ENST00000559850 KRTAP4-7Q9BYR0 210 aa5.11□□□□□ -1.59
RABGGTA-211ENST00000559850 A6NED7 52 aa5.1□□□□□ -1.59
RABGGTA-211ENST00000559850 PCP4P48539 62 aa5.08□□□□□ -1.6
RABGGTA-211ENST00000559850 LCE1DQ5T752 114 aa5.02□□□□□ -1.61
RABGGTA-211ENST00000559850 MT4P47944 62 aa5□□□□□ -1.61
RABGGTA-211ENST00000559850 RPS28P62857 69 aaKnown RBP5□□□□□ -1.61
RABGGTA-211ENST00000559850 LCE4AQ5TA78 99 aa4.98□□□□□ -1.61
RABGGTA-211ENST00000559850 GPR98Q8WXG9 6306 aa4.93□□□□□ -1.62
RABGGTA-211ENST00000559850 KRTAP5-4Q6L8H1 288 aa4.92□□□□□ -1.62
RABGGTA-211ENST00000559850 CDC42SE1Q9NRR8 79 aa4.92□□□□□ -1.62
RABGGTA-211ENST00000559850 HMCN1Q96RW7 5635 aa4.89□□□□□ -1.63
RABGGTA-211ENST00000559850 KRTAP23-1A1A580 65 aa4.88□□□□□ -1.63
RABGGTA-211ENST00000559850 ROMO1P60602 79 aa4.86□□□□□ -1.63
RABGGTA-211ENST00000559850 KRTAP4-6Q9BYQ5 205 aa4.86□□□□□ -1.63
RABGGTA-211ENST00000559850 KRTAP15-1Q3LI76 137 aa4.84□□□□□ -1.63
RABGGTA-211ENST00000559850 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
RABGGTA-211ENST00000559850 KRTAP5-5Q701N2 237 aaPredicted RBP4.79□□□□□ -1.64
RABGGTA-211ENST00000559850 LCE3CQ5T5A8 94 aa4.76□□□□□ -1.65
RABGGTA-211ENST00000559850 KRTAP19-4Q3LI73 84 aa4.73□□□□□ -1.65
RABGGTA-211ENST00000559850 AHNAK2Q8IVF2 5795 aa4.71□□□□□ -1.66
RABGGTA-211ENST00000559850 KRTAP20-2Q3LI61 65 aa4.66□□□□□ -1.66
RABGGTA-211ENST00000559850 SYNE1Q8NF91 8797 aaKnown RBP4.63□□□□□ -1.67
RABGGTA-211ENST00000559850 KRTAP12-4P60329 112 aa4.61□□□□□ -1.67
RABGGTA-211ENST00000559850 SPRR5A0A1B0GTR4 108 aa4.6□□□□□ -1.67
RABGGTA-211ENST00000559850 KRTAP5-10Q6L8G5 202 aa4.58□□□□□ -1.68
RABGGTA-211ENST00000559850 KRTAP9-6A8MVA2 160 aa4.54□□□□□ -1.68
RABGGTA-211ENST00000559850 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
RABGGTA-211ENST00000559850 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
RABGGTA-211ENST00000559850 MT1AP04731 61 aa4.49□□□□□ -1.69
RABGGTA-211ENST00000559850 BRK1Q8WUW1 75 aa4.48□□□□□ -1.69
RABGGTA-211ENST00000559850 KRTAP5-7Q6L8G8 165 aa4.38□□□□□ -1.71
RABGGTA-211ENST00000559850 KRTAP5-2Q701N4 177 aa4.33□□□□□ -1.72
RABGGTA-211ENST00000559850 KRTAP9-4Q9BYQ2 154 aa4.33□□□□□ -1.72
RABGGTA-211ENST00000559850 KRTAP6-2Q3LI66 62 aa4.28□□□□□ -1.72
RABGGTA-211ENST00000559850 KRTAP4-11Q9BYQ6 195 aa4.22□□□□□ -1.73
RABGGTA-211ENST00000559850 PMAIP1Q13794 54 aa4.18□□□□□ -1.74
RABGGTA-211ENST00000559850 PRAC1Q96KF2 57 aa4.1□□□□□ -1.75
RABGGTA-211ENST00000559850 KRTAP5-8O75690 187 aa4.09□□□□□ -1.75
RABGGTA-211ENST00000559850 MT3P25713 68 aa4.08□□□□□ -1.76
RABGGTA-211ENST00000559850 H3BS24 57 aa4.04□□□□□ -1.76
RABGGTA-211ENST00000559850 OBSCNQ5VST9 7968 aa4.03□□□□□ -1.76
RABGGTA-211ENST00000559850 A0A0A0MQY5 61 aa4.02□□□□□ -1.77
RABGGTA-211ENST00000559850 PRO0628Q9UI54 55 aa3.88□□□□□ -1.79
RABGGTA-211ENST00000559850 KRTAP5-1Q6L8H4 278 aa3.87□□□□□ -1.79
RABGGTA-211ENST00000559850 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
RABGGTA-211ENST00000559850 AHNAKQ09666 5890 aaKnown RBP3.83□□□□□ -1.8
RABGGTA-211ENST00000559850 MUC5ACP98088 5654 aa3.83□□□□□ -1.8
RABGGTA-211ENST00000559850 MUC5BQ9HC84 5762 aaPredicted RBP3.81□□□□□ -1.8
RABGGTA-211ENST00000559850 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
RABGGTA-211ENST00000559850 LCE1EQ5T753 118 aa3.69□□□□□ -1.82
RABGGTA-211ENST00000559850 LCE1BQ5T7P3 118 aa3.57□□□□□ -1.84
RABGGTA-211ENST00000559850 KRTAP4-2Q9BYR5 136 aa3.54□□□□□ -1.84
RABGGTA-211ENST00000559850 LCE1CQ5T751 118 aa3.44□□□□□ -1.86
RABGGTA-211ENST00000559850 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
RABGGTA-211ENST00000559850 LUZP6Q538Z0 58 aa3.33□□□□□ -1.88
RABGGTA-211ENST00000559850 LCE3EQ5T5B0 92 aa3.25□□□□□ -1.89
RABGGTA-211ENST00000559850 KRTAP4-12Q9BQ66 201 aa3.24□□□□□ -1.89
RABGGTA-211ENST00000559850 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.13□□□□□ -1.91
RABGGTA-211ENST00000559850 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
RABGGTA-211ENST00000559850 LCE1FQ5T754 118 aa2.97□□□□□ -1.93
RABGGTA-211ENST00000559850 KRTAP21-2Q3LI59 83 aa2.95□□□□□ -1.94
RABGGTA-211ENST00000559850 NDUFAF8A1L188 74 aa2.83□□□□□ -1.96
RABGGTA-211ENST00000559850 KRTAP4-4Q9BYR3 166 aa2.76□□□□□ -1.97
RABGGTA-211ENST00000559850 PHGR1C9JFL3 82 aa2.7□□□□□ -1.98
RABGGTA-211ENST00000559850 PRM1P04553 51 aa2.53□□□□□ -2
RABGGTA-211ENST00000559850 MUC19Q7Z5P9 8384 aa2.48□□□□□ -2.01
RABGGTA-211ENST00000559850 INE1O15225 51 aa2.42□□□□□ -2.02
RABGGTA-211ENST00000559850 KRTAP21-1Q3LI58 79 aa1.99□□□□□ -2.09
RABGGTA-211ENST00000559850 MUC16Q8WXI7 14507 aa1.8□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 33.4 ms