RNA–Protein interactions for RNA: ENST00000559373.1

TSPAN3-206, Transcript of tetraspanin 3, humanhuman

TSL 3

Gene TSPAN3, Length 393 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-206ENST00000559373 KRTAP5-4Q6L8H1 288 aa7.05□□□□□ -1.28
TSPAN3-206ENST00000559373 KRTAP4-7Q9BYR0 210 aa7.03□□□□□ -1.28
TSPAN3-206ENST00000559373 ANAPC13Q9BS18 74 aa7.01□□□□□ -1.29
TSPAN3-206ENST00000559373 KRTAP5-10Q6L8G5 202 aa6.92□□□□□ -1.3
TSPAN3-206ENST00000559373 AHNAK2Q8IVF2 5795 aa6.91□□□□□ -1.3
TSPAN3-206ENST00000559373 CCDC179H3BU77 68 aa6.9□□□□□ -1.3
TSPAN3-206ENST00000559373 KRTAP12-3P60328 96 aa6.88□□□□□ -1.31
TSPAN3-206ENST00000559373 PRR15LQ9BU68 103 aa6.8□□□□□ -1.32
TSPAN3-206ENST00000559373 KRTAP5-3Q6L8H2 238 aa6.73□□□□□ -1.33
TSPAN3-206ENST00000559373 LINC01558Q9Y6Z2 57 aa6.72□□□□□ -1.33
TSPAN3-206ENST00000559373 KRTAP20-2Q3LI61 65 aa6.71□□□□□ -1.34
TSPAN3-206ENST00000559373 ATP5EP56381 51 aaPredicted RBP6.69□□□□□ -1.34
TSPAN3-206ENST00000559373 KRTAP5-5Q701N2 237 aaPredicted RBP6.69□□□□□ -1.34
TSPAN3-206ENST00000559373 LOC100996750A0A140TA64 210 aa6.67□□□□□ -1.34
TSPAN3-206ENST00000559373 KRTAP5-7Q6L8G8 165 aa6.65□□□□□ -1.34
TSPAN3-206ENST00000559373 TMEM258P61165 79 aa6.64□□□□□ -1.35
TSPAN3-206ENST00000559373 PCP4P48539 62 aa6.6□□□□□ -1.35
TSPAN3-206ENST00000559373 UQCR11O14957 56 aa6.59□□□□□ -1.35
TSPAN3-206ENST00000559373 SPRR5A0A1B0GTR4 108 aa6.57□□□□□ -1.36
TSPAN3-206ENST00000559373 KRTAP12-4P60329 112 aa6.56□□□□□ -1.36
TSPAN3-206ENST00000559373 KRTAP25-1Q3LHN0 102 aa6.51□□□□□ -1.37
TSPAN3-206ENST00000559373 MIR22HGQ0VDD5 57 aa6.46□□□□□ -1.38
TSPAN3-206ENST00000559373 SYNE1Q8NF91 8797 aaKnown RBP6.41□□□□□ -1.38
TSPAN3-206ENST00000559373 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
TSPAN3-206ENST00000559373 K7ERS5 55 aa6.32□□□□□ -1.4
TSPAN3-206ENST00000559373 LCE3CQ5T5A8 94 aa6.31□□□□□ -1.4
TSPAN3-206ENST00000559373 RPS28P62857 69 aaKnown RBP6.29□□□□□ -1.4
TSPAN3-206ENST00000559373 PSPHP1O15172 72 aa6.27□□□□□ -1.41
TSPAN3-206ENST00000559373 KRTAP19-4Q3LI73 84 aa6.26□□□□□ -1.41
TSPAN3-206ENST00000559373 Q1T7F1 81 aa6.21□□□□□ -1.42
TSPAN3-206ENST00000559373 KRTAP6-1Q3LI64 71 aa6.21□□□□□ -1.42
TSPAN3-206ENST00000559373 V9GYY9 64 aa6.21□□□□□ -1.42
TSPAN3-206ENST00000559373 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
TSPAN3-206ENST00000559373 KRTAP4-11Q9BYQ6 195 aa6.17□□□□□ -1.42
TSPAN3-206ENST00000559373 MT1AP04731 61 aa6.15□□□□□ -1.42
TSPAN3-206ENST00000559373 KRTAP5-2Q701N4 177 aa6.13□□□□□ -1.43
TSPAN3-206ENST00000559373 KRTAP9-6A8MVA2 160 aa6.03□□□□□ -1.44
TSPAN3-206ENST00000559373 KRTAP9-4Q9BYQ2 154 aa6□□□□□ -1.45
TSPAN3-206ENST00000559373 A6NED7 52 aa5.98□□□□□ -1.45
TSPAN3-206ENST00000559373 KRTAP5-8O75690 187 aa5.98□□□□□ -1.45
TSPAN3-206ENST00000559373 CDC42SE1Q9NRR8 79 aa5.98□□□□□ -1.45
TSPAN3-206ENST00000559373 KRTAP6-2Q3LI66 62 aa5.97□□□□□ -1.45
TSPAN3-206ENST00000559373 ROMO1P60602 79 aa5.89□□□□□ -1.47
TSPAN3-206ENST00000559373 OBSCNQ5VST9 7968 aa5.85□□□□□ -1.47
TSPAN3-206ENST00000559373 KRTAP9-9Q9BYP9 154 aa5.7□□□□□ -1.5
TSPAN3-206ENST00000559373 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
TSPAN3-206ENST00000559373 MUC5BQ9HC84 5762 aaPredicted RBP5.66□□□□□ -1.5
TSPAN3-206ENST00000559373 MT3P25713 68 aa5.62□□□□□ -1.51
TSPAN3-206ENST00000559373 AHNAKQ09666 5890 aaKnown RBP5.6□□□□□ -1.51
TSPAN3-206ENST00000559373 KRTAP5-1Q6L8H4 278 aa5.57□□□□□ -1.52
TSPAN3-206ENST00000559373 BRK1Q8WUW1 75 aa5.5□□□□□ -1.53
TSPAN3-206ENST00000559373 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
TSPAN3-206ENST00000559373 PRO0628Q9UI54 55 aa5.21□□□□□ -1.58
TSPAN3-206ENST00000559373 LCE1EQ5T753 118 aa5.16□□□□□ -1.58
TSPAN3-206ENST00000559373 LCE1BQ5T7P3 118 aa5.04□□□□□ -1.6
TSPAN3-206ENST00000559373 KRTAP4-2Q9BYR5 136 aa5□□□□□ -1.61
TSPAN3-206ENST00000559373 PRAC1Q96KF2 57 aa4.94□□□□□ -1.62
TSPAN3-206ENST00000559373 KTN1-AS1Q86SY8 53 aa4.87□□□□□ -1.63
TSPAN3-206ENST00000559373 LCE1CQ5T751 118 aa4.82□□□□□ -1.64
TSPAN3-206ENST00000559373 KRTAP4-12Q9BQ66 201 aa4.72□□□□□ -1.65
TSPAN3-206ENST00000559373 H3BS24 57 aa4.61□□□□□ -1.67
TSPAN3-206ENST00000559373 SVIPQ8NHG7 77 aa4.53□□□□□ -1.68
TSPAN3-206ENST00000559373 LCE3DQ9BYE3 92 aa4.49□□□□□ -1.69
TSPAN3-206ENST00000559373 KRTAP5-11Q6L8G4 156 aa4.38□□□□□ -1.71
TSPAN3-206ENST00000559373 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
TSPAN3-206ENST00000559373 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
TSPAN3-206ENST00000559373 LCE3EQ5T5B0 92 aa4.18□□□□□ -1.74
TSPAN3-206ENST00000559373 PHGR1C9JFL3 82 aa4.07□□□□□ -1.76
TSPAN3-206ENST00000559373 LUZP6Q538Z0 58 aa4.07□□□□□ -1.76
TSPAN3-206ENST00000559373 KRTAP21-2Q3LI59 83 aa4.06□□□□□ -1.76
TSPAN3-206ENST00000559373 KRTAP4-4Q9BYR3 166 aa3.88□□□□□ -1.79
TSPAN3-206ENST00000559373 NDUFAF8A1L188 74 aa3.68□□□□□ -1.82
TSPAN3-206ENST00000559373 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
TSPAN3-206ENST00000559373 A0A0A0MQY5 61 aa3.15□□□□□ -1.91
TSPAN3-206ENST00000559373 PRM1P04553 51 aa3.06□□□□□ -1.92
TSPAN3-206ENST00000559373 INE1O15225 51 aa3.04□□□□□ -1.92
TSPAN3-206ENST00000559373 KRTAP21-1Q3LI58 79 aa3.03□□□□□ -1.92
TSPAN3-206ENST00000559373 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 119.2 ms