RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
VPS18-203ENST00000558855 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
VPS18-203ENST00000558855 A0A1B0GU69 56 aa4.64□□□□□ -1.67
VPS18-203ENST00000558855 SMIM26A0A096LP01 95 aa4.62□□□□□ -1.67
VPS18-203ENST00000558855 KRTAP5-10Q6L8G5 202 aa4.61□□□□□ -1.67
VPS18-203ENST00000558855 TNP1P09430 55 aa4.59□□□□□ -1.67
VPS18-203ENST00000558855 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
VPS18-203ENST00000558855 KRTAP12-3P60328 96 aa4.52□□□□□ -1.69
VPS18-203ENST00000558855 CCDC179H3BU77 68 aa4.49□□□□□ -1.69
VPS18-203ENST00000558855 KRTAP5-5Q701N2 237 aaPredicted RBP4.48□□□□□ -1.69
VPS18-203ENST00000558855 PRR15LQ9BU68 103 aa4.47□□□□□ -1.69
VPS18-203ENST00000558855 KRTAP20-2Q3LI61 65 aa4.46□□□□□ -1.7
VPS18-203ENST00000558855 KRTAP5-3Q6L8H2 238 aa4.46□□□□□ -1.7
VPS18-203ENST00000558855 LOC100996750A0A140TA64 210 aa4.42□□□□□ -1.7
VPS18-203ENST00000558855 KRTAP5-7Q6L8G8 165 aa4.42□□□□□ -1.7
VPS18-203ENST00000558855 ATP5EP56381 51 aaPredicted RBP4.41□□□□□ -1.7
VPS18-203ENST00000558855 LINC01558Q9Y6Z2 57 aa4.41□□□□□ -1.7
VPS18-203ENST00000558855 SYNE1Q8NF91 8797 aaKnown RBP4.37□□□□□ -1.71
VPS18-203ENST00000558855 SPRR5A0A1B0GTR4 108 aa4.35□□□□□ -1.71
VPS18-203ENST00000558855 RPS28P62857 69 aaKnown RBP4.34□□□□□ -1.71
VPS18-203ENST00000558855 UQCR11O14957 56 aa4.32□□□□□ -1.72
VPS18-203ENST00000558855 V9GYY9 64 aa4.31□□□□□ -1.72
VPS18-203ENST00000558855 PRO0628Q9UI54 55 aa4.29□□□□□ -1.72
VPS18-203ENST00000558855 TMEM258P61165 79 aa4.28□□□□□ -1.72
VPS18-203ENST00000558855 KRTAP12-4P60329 112 aa4.26□□□□□ -1.73
VPS18-203ENST00000558855 KRTAP25-1Q3LHN0 102 aa4.25□□□□□ -1.73
VPS18-203ENST00000558855 MIR22HGQ0VDD5 57 aa4.23□□□□□ -1.73
VPS18-203ENST00000558855 K7ERS5 55 aa4.15□□□□□ -1.75
VPS18-203ENST00000558855 KRTAP15-1Q3LI76 137 aa4.15□□□□□ -1.75
VPS18-203ENST00000558855 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
VPS18-203ENST00000558855 KRTAP6-1Q3LI64 71 aa4.13□□□□□ -1.75
VPS18-203ENST00000558855 KRTAP5-2Q701N4 177 aa4.12□□□□□ -1.75
VPS18-203ENST00000558855 PSPHP1O15172 72 aa4.11□□□□□ -1.75
VPS18-203ENST00000558855 MT1AP04731 61 aa4.08□□□□□ -1.76
VPS18-203ENST00000558855 KRTAP19-4Q3LI73 84 aa4.08□□□□□ -1.76
VPS18-203ENST00000558855 KRTAP4-11Q9BYQ6 195 aa4.08□□□□□ -1.76
VPS18-203ENST00000558855 KRTAP23-1A1A580 65 aa4.05□□□□□ -1.76
VPS18-203ENST00000558855 KRTAP9-6A8MVA2 160 aa4.05□□□□□ -1.76
VPS18-203ENST00000558855 PMAIP1Q13794 54 aa4.05□□□□□ -1.76
VPS18-203ENST00000558855 Q1T7F1 81 aa4.04□□□□□ -1.76
VPS18-203ENST00000558855 AHNAKQ09666 5890 aaKnown RBP4.01□□□□□ -1.77
VPS18-203ENST00000558855 KRTAP5-8O75690 187 aa3.99□□□□□ -1.77
VPS18-203ENST00000558855 H3BS24 57 aa3.97□□□□□ -1.77
VPS18-203ENST00000558855 MUC5BQ9HC84 5762 aaPredicted RBP3.96□□□□□ -1.78
VPS18-203ENST00000558855 A6NED7 52 aa3.95□□□□□ -1.78
VPS18-203ENST00000558855 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
VPS18-203ENST00000558855 OBSCNQ5VST9 7968 aa3.94□□□□□ -1.78
VPS18-203ENST00000558855 MUC5ACP98088 5654 aa3.94□□□□□ -1.78
VPS18-203ENST00000558855 KRTAP6-2Q3LI66 62 aa3.94□□□□□ -1.78
VPS18-203ENST00000558855 CDC42SE1Q9NRR8 79 aa3.92□□□□□ -1.78
VPS18-203ENST00000558855 BRK1Q8WUW1 75 aa3.89□□□□□ -1.79
VPS18-203ENST00000558855 ROMO1P60602 79 aa3.86□□□□□ -1.79
VPS18-203ENST00000558855 KTN1-AS1Q86SY8 53 aa3.86□□□□□ -1.79
VPS18-203ENST00000558855 A0A0A0MQY5 61 aa3.74□□□□□ -1.81
VPS18-203ENST00000558855 KRTAP5-1Q6L8H4 278 aa3.73□□□□□ -1.81
VPS18-203ENST00000558855 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
VPS18-203ENST00000558855 MT3P25713 68 aa3.68□□□□□ -1.82
VPS18-203ENST00000558855 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
VPS18-203ENST00000558855 PRAC1Q96KF2 57 aa3.36□□□□□ -1.87
VPS18-203ENST00000558855 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
VPS18-203ENST00000558855 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
VPS18-203ENST00000558855 KRTAP4-12Q9BQ66 201 aa3.26□□□□□ -1.89
VPS18-203ENST00000558855 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
VPS18-203ENST00000558855 LCE1CQ5T751 118 aa3.19□□□□□ -1.9
VPS18-203ENST00000558855 NDUFAF8A1L188 74 aa3.08□□□□□ -1.92
VPS18-203ENST00000558855 KRTAP5-11Q6L8G4 156 aa2.92□□□□□ -1.94
VPS18-203ENST00000558855 LCE3DQ9BYE3 92 aa2.92□□□□□ -1.94
VPS18-203ENST00000558855 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.9□□□□□ -1.95
VPS18-203ENST00000558855 LCE1FQ5T754 118 aa2.81□□□□□ -1.96
VPS18-203ENST00000558855 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
VPS18-203ENST00000558855 LCE3EQ5T5B0 92 aa2.72□□□□□ -1.97
VPS18-203ENST00000558855 INE1O15225 51 aa2.69□□□□□ -1.98
VPS18-203ENST00000558855 PHGR1C9JFL3 82 aa2.66□□□□□ -1.98
VPS18-203ENST00000558855 KRTAP4-4Q9BYR3 166 aa2.55□□□□□ -2
VPS18-203ENST00000558855 MUC19Q7Z5P9 8384 aa2.43□□□□□ -2.02
VPS18-203ENST00000558855 PRM1P04553 51 aa2□□□□□ -2.09
VPS18-203ENST00000558855 KRTAP21-1Q3LI58 79 aa1.97□□□□□ -2.09
VPS18-203ENST00000558855 MUC16Q8WXI7 14507 aa1.78□□□□□ -2.12
Retrieved 78 of 20,778 RNA–protein pairs in 263.1 ms