RNA–Protein interactions for RNA: ENST00000558735.1

CASC4-205, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 427 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-205ENST00000558735 KRTAP5-3Q6L8H2 238 aa4.03□□□□□ -1.76
CASC4-205ENST00000558735 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
CASC4-205ENST00000558735 A0A1B0GU69 56 aa4.02□□□□□ -1.77
CASC4-205ENST00000558735 C10orf95Q9H7T3 257 aa4.02□□□□□ -1.77
CASC4-205ENST00000558735 TNP1P09430 55 aa3.99□□□□□ -1.77
CASC4-205ENST00000558735 SPRR5A0A1B0GTR4 108 aa3.98□□□□□ -1.77
CASC4-205ENST00000558735 KRTAP4-7Q9BYR0 210 aa3.92□□□□□ -1.78
CASC4-205ENST00000558735 KRTAP12-3P60328 96 aa3.87□□□□□ -1.79
CASC4-205ENST00000558735 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
CASC4-205ENST00000558735 ANAPC13Q9BS18 74 aa3.86□□□□□ -1.79
CASC4-205ENST00000558735 PRR15LQ9BU68 103 aa3.84□□□□□ -1.79
CASC4-205ENST00000558735 CCDC179H3BU77 68 aa3.83□□□□□ -1.8
CASC4-205ENST00000558735 LINC01558Q9Y6Z2 57 aa3.82□□□□□ -1.8
CASC4-205ENST00000558735 KRTAP5-5Q701N2 237 aaPredicted RBP3.78□□□□□ -1.8
CASC4-205ENST00000558735 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
CASC4-205ENST00000558735 ATP5EP56381 51 aaPredicted RBP3.76□□□□□ -1.81
CASC4-205ENST00000558735 UQCR11O14957 56 aa3.74□□□□□ -1.81
CASC4-205ENST00000558735 KRTAP12-4P60329 112 aa3.73□□□□□ -1.81
CASC4-205ENST00000558735 LOC100996750A0A140TA64 210 aa3.71□□□□□ -1.82
CASC4-205ENST00000558735 KRTAP25-1Q3LHN0 102 aa3.69□□□□□ -1.82
CASC4-205ENST00000558735 MUC5ACP98088 5654 aa3.68□□□□□ -1.82
CASC4-205ENST00000558735 MUC5BQ9HC84 5762 aaPredicted RBP3.64□□□□□ -1.83
CASC4-205ENST00000558735 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
CASC4-205ENST00000558735 KRTAP19-4Q3LI73 84 aa3.64□□□□□ -1.83
CASC4-205ENST00000558735 KRTAP4-11Q9BYQ6 195 aa3.64□□□□□ -1.83
CASC4-205ENST00000558735 TMEM258P61165 79 aa3.62□□□□□ -1.83
CASC4-205ENST00000558735 SYNE1Q8NF91 8797 aaKnown RBP3.6□□□□□ -1.83
CASC4-205ENST00000558735 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
CASC4-205ENST00000558735 KRTAP23-1A1A580 65 aa3.57□□□□□ -1.84
CASC4-205ENST00000558735 K7ERS5 55 aa3.56□□□□□ -1.84
CASC4-205ENST00000558735 LCE3CQ5T5A8 94 aa3.56□□□□□ -1.84
CASC4-205ENST00000558735 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
CASC4-205ENST00000558735 KRTAP5-8O75690 187 aa3.53□□□□□ -1.84
CASC4-205ENST00000558735 PSPHP1O15172 72 aa3.51□□□□□ -1.85
CASC4-205ENST00000558735 KRTAP6-1Q3LI64 71 aa3.48□□□□□ -1.85
CASC4-205ENST00000558735 MT1AP04731 61 aa3.47□□□□□ -1.85
CASC4-205ENST00000558735 Q1T7F1 81 aa3.47□□□□□ -1.85
CASC4-205ENST00000558735 V9GYY9 64 aa3.47□□□□□ -1.85
CASC4-205ENST00000558735 KRTAP9-6A8MVA2 160 aa3.39□□□□□ -1.87
CASC4-205ENST00000558735 KRTAP9-9Q9BYP9 154 aa3.39□□□□□ -1.87
CASC4-205ENST00000558735 KRTAP9-4Q9BYQ2 154 aa3.39□□□□□ -1.87
CASC4-205ENST00000558735 OBSCNQ5VST9 7968 aa3.37□□□□□ -1.87
CASC4-205ENST00000558735 CDC42SE1Q9NRR8 79 aa3.37□□□□□ -1.87
CASC4-205ENST00000558735 A6NED7 52 aa3.35□□□□□ -1.87
CASC4-205ENST00000558735 ROMO1P60602 79 aa3.33□□□□□ -1.88
CASC4-205ENST00000558735 KRTAP6-2Q3LI66 62 aa3.33□□□□□ -1.88
CASC4-205ENST00000558735 RPS28P62857 69 aaKnown RBP3.32□□□□□ -1.88
CASC4-205ENST00000558735 KRTAP5-1Q6L8H4 278 aa3.23□□□□□ -1.89
CASC4-205ENST00000558735 MT3P25713 68 aa3.18□□□□□ -1.9
CASC4-205ENST00000558735 LCE1EQ5T753 118 aa2.98□□□□□ -1.93
CASC4-205ENST00000558735 PCP4P48539 62 aa2.94□□□□□ -1.94
CASC4-205ENST00000558735 H3BS24 57 aa2.84□□□□□ -1.95
CASC4-205ENST00000558735 KRTAP4-2Q9BYR5 136 aa2.82□□□□□ -1.96
CASC4-205ENST00000558735 LCE1BQ5T7P3 118 aa2.79□□□□□ -1.96
CASC4-205ENST00000558735 LCE1CQ5T751 118 aa2.75□□□□□ -1.97
CASC4-205ENST00000558735 BRK1Q8WUW1 75 aa2.71□□□□□ -1.98
CASC4-205ENST00000558735 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
CASC4-205ENST00000558735 KRTAP5-11Q6L8G4 156 aa2.6□□□□□ -1.99
CASC4-205ENST00000558735 LCE1FQ5T754 118 aa2.57□□□□□ -2
CASC4-205ENST00000558735 PMAIP1Q13794 54 aa2.55□□□□□ -2
CASC4-205ENST00000558735 LCE3DQ9BYE3 92 aa2.54□□□□□ -2
CASC4-205ENST00000558735 PRAC1Q96KF2 57 aa2.52□□□□□ -2.01
CASC4-205ENST00000558735 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.48□□□□□ -2.01
CASC4-205ENST00000558735 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
CASC4-205ENST00000558735 LCE3EQ5T5B0 92 aa2.37□□□□□ -2.03
CASC4-205ENST00000558735 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
CASC4-205ENST00000558735 PRO0628Q9UI54 55 aa2.18□□□□□ -2.06
CASC4-205ENST00000558735 KRTAP4-4Q9BYR3 166 aa2.13□□□□□ -2.07
CASC4-205ENST00000558735 KTN1-AS1Q86SY8 53 aa2.12□□□□□ -2.07
CASC4-205ENST00000558735 LUZP6Q538Z0 58 aa2.1□□□□□ -2.07
CASC4-205ENST00000558735 MUC19Q7Z5P9 8384 aa2.09□□□□□ -2.07
CASC4-205ENST00000558735 SVIPQ8NHG7 77 aa2.05□□□□□ -2.08
CASC4-205ENST00000558735 KRTAP21-1Q3LI58 79 aa1.9□□□□□ -2.11
CASC4-205ENST00000558735 A0A0A0MQY5 61 aa1.83□□□□□ -2.12
CASC4-205ENST00000558735 PRM1P04553 51 aa1.7□□□□□ -2.14
CASC4-205ENST00000558735 NDUFAF8A1L188 74 aa1.53□□□□□ -2.16
CASC4-205ENST00000558735 MUC16Q8WXI7 14507 aa1.48□□□□□ -2.17
CASC4-205ENST00000558735 INE1O15225 51 aa1.15□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 99.1 ms