RNA–Protein interactions for RNA: ENST00000558500.5

LRRC28-207, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-207ENST00000558500 A0A0D9SG42 100 aa2.32□□□□□ -2.04
LRRC28-207ENST00000558500 LCE3EQ5T5B0 92 aa2.32□□□□□ -2.04
LRRC28-207ENST00000558500 TAX1BP3O14907 124 aa2.31□□□□□ -2.04
LRRC28-207ENST00000558500 LINC00208Q96KT6 92 aa2.3□□□□□ -2.04
LRRC28-207ENST00000558500 SYNE1Q8NF91 8797 aaKnown RBP2.29□□□□□ -2.04
LRRC28-207ENST00000558500 K7ERS5 55 aa2.29□□□□□ -2.04
LRRC28-207ENST00000558500 DMAC1Q96GE9 116 aa2.28□□□□□ -2.04
LRRC28-207ENST00000558500 KRTAP12-4P60329 112 aa2.27□□□□□ -2.05
LRRC28-207ENST00000558500 SPINT4Q6UDR6 99 aa2.26□□□□□ -2.05
LRRC28-207ENST00000558500 KRTAP5-5Q701N2 237 aaPredicted RBP2.26□□□□□ -2.05
LRRC28-207ENST00000558500 PRO0461Q9UI25 63 aa2.25□□□□□ -2.05
LRRC28-207ENST00000558500 KRTAP4-4Q9BYR3 166 aa2.24□□□□□ -2.05
LRRC28-207ENST00000558500 KRTAP13-4Q3LI77 160 aa2.23□□□□□ -2.05
LRRC28-207ENST00000558500 TRAV7A0A075B6U4 112 aa2.22□□□□□ -2.05
LRRC28-207ENST00000558500 HIST1H4AP62805 103 aaKnown RBP2.21□□□□□ -2.06
LRRC28-207ENST00000558500 KRTAP5-8O75690 187 aa2.2□□□□□ -2.06
LRRC28-207ENST00000558500 C10orf95Q9H7T3 257 aa2.2□□□□□ -2.06
LRRC28-207ENST00000558500 A6NED7 52 aa2.19□□□□□ -2.06
LRRC28-207ENST00000558500 SPTSSBQ8NFR3 76 aa2.19□□□□□ -2.06
LRRC28-207ENST00000558500 ATP5EP2Q5VTU8 51 aa2.18□□□□□ -2.06
LRRC28-207ENST00000558500 A0A1B0GU33 70 aa2.17□□□□□ -2.06
LRRC28-207ENST00000558500 LCE3AQ5TA76 89 aa2.16□□□□□ -2.06
LRRC28-207ENST00000558500 H3BPC8 53 aa2.15□□□□□ -2.07
LRRC28-207ENST00000558500 ACYP2P14621 99 aa2.15□□□□□ -2.07
LRRC28-207ENST00000558500 KRTAP25-1Q3LHN0 102 aa2.15□□□□□ -2.07
LRRC28-207ENST00000558500 ETDBQ3ZM63 59 aa2.14□□□□□ -2.07
LRRC28-207ENST00000558500 KRTAP5-2Q701N4 177 aa2.13□□□□□ -2.07
LRRC28-207ENST00000558500 CHKB-CPT1BH3BT56 60 aa2.11□□□□□ -2.07
LRRC28-207ENST00000558500 SMIM6P0DI80 62 aa2.11□□□□□ -2.07
LRRC28-207ENST00000558500 OBSCNQ5VST9 7968 aa2.11□□□□□ -2.07
LRRC28-207ENST00000558500 F8W1H4 67 aa2.1□□□□□ -2.07
LRRC28-207ENST00000558500 PMAIP1Q13794 54 aa2.1□□□□□ -2.07
LRRC28-207ENST00000558500 KRTAP12-3P60328 96 aa2.08□□□□□ -2.08
LRRC28-207ENST00000558500 KRTAP12-1P59990 96 aa2.07□□□□□ -2.08
LRRC28-207ENST00000558500 COL5A1-AS1Q5SY13 56 aa2.06□□□□□ -2.08
LRRC28-207ENST00000558500 GTF2H5Q6ZYL4 71 aa2.06□□□□□ -2.08
LRRC28-207ENST00000558500 TNP1P09430 55 aa2.05□□□□□ -2.08
LRRC28-207ENST00000558500 SPATA8Q6RVD6 105 aa2.05□□□□□ -2.08
LRRC28-207ENST00000558500 LINC00643Q86TS7 51 aa2.05□□□□□ -2.08
LRRC28-207ENST00000558500 MT1AP04731 61 aa2.01□□□□□ -2.09
LRRC28-207ENST00000558500 KRTAP6-1Q3LI64 71 aa2.01□□□□□ -2.09
LRRC28-207ENST00000558500 SCGB1A1P11684 91 aa1.99□□□□□ -2.09
LRRC28-207ENST00000558500 KRTAP6-2Q3LI66 62 aa1.99□□□□□ -2.09
LRRC28-207ENST00000558500 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
LRRC28-207ENST00000558500 SERP1Q9Y6X1 66 aa1.96□□□□□ -2.1
LRRC28-207ENST00000558500 SNURFQ9Y675 71 aa1.88□□□□□ -2.11
LRRC28-207ENST00000558500 COA5Q86WW8 74 aa1.87□□□□□ -2.11
LRRC28-207ENST00000558500 SMIM20Q8N5G0 67 aa1.86□□□□□ -2.11
LRRC28-207ENST00000558500 LOC105371267A0A1B0GV96 52 aa1.85□□□□□ -2.11
LRRC28-207ENST00000558500 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
LRRC28-207ENST00000558500 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
LRRC28-207ENST00000558500 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
LRRC28-207ENST00000558500 TMEM258P61165 79 aa1.81□□□□□ -2.12
LRRC28-207ENST00000558500 SERP2Q8N6R1 65 aa1.81□□□□□ -2.12
LRRC28-207ENST00000558500 A0A1B0GU69 56 aa1.78□□□□□ -2.12
LRRC28-207ENST00000558500 J3QR89 54 aa1.75□□□□□ -2.13
LRRC28-207ENST00000558500 Q1T7F1 81 aa1.7□□□□□ -2.14
LRRC28-207ENST00000558500 H7BZZ5 65 aa1.68□□□□□ -2.14
LRRC28-207ENST00000558500 PRR15LQ9BU68 103 aa1.68□□□□□ -2.14
LRRC28-207ENST00000558500 A0A1B0GV90 55 aa1.64□□□□□ -2.15
LRRC28-207ENST00000558500 ROMO1P60602 79 aa1.61□□□□□ -2.15
LRRC28-207ENST00000558500 PHGR1C9JFL3 82 aa1.57□□□□□ -2.16
LRRC28-207ENST00000558500 UQCR11O14957 56 aa1.57□□□□□ -2.16
LRRC28-207ENST00000558500 RPS28P62857 69 aaKnown RBP1.56□□□□□ -2.16
LRRC28-207ENST00000558500 LINC01558Q9Y6Z2 57 aa1.55□□□□□ -2.16
LRRC28-207ENST00000558500 COX7CP15954 63 aa1.54□□□□□ -2.16
LRRC28-207ENST00000558500 K7ERU9 68 aa1.52□□□□□ -2.17
LRRC28-207ENST00000558500 MIR22HGQ0VDD5 57 aa1.5□□□□□ -2.17
LRRC28-207ENST00000558500 INE1O15225 51 aa1.46□□□□□ -2.18
LRRC28-207ENST00000558500 BRK1Q8WUW1 75 aa1.45□□□□□ -2.18
LRRC28-207ENST00000558500 CDC42SE1Q9NRR8 79 aa1.44□□□□□ -2.18
LRRC28-207ENST00000558500 MUC19Q7Z5P9 8384 aa1.41□□□□□ -2.18
LRRC28-207ENST00000558500 ATP5EP56381 51 aaPredicted RBP1.37□□□□□ -2.19
LRRC28-207ENST00000558500 KRTAP21-2Q3LI59 83 aa1.33□□□□□ -2.2
LRRC28-207ENST00000558500 CCDC179H3BU77 68 aa1.29□□□□□ -2.2
LRRC28-207ENST00000558500 KRTAP21-1Q3LI58 79 aa1.2□□□□□ -2.22
LRRC28-207ENST00000558500 MUC16Q8WXI7 14507 aa0.85□□□□□ -2.27
LRRC28-207ENST00000558500 PRM1P04553 51 aa0.68□□□□□ -2.3
Retrieved 78 of 20,778 RNA–protein pairs in 41.9 ms