RNA–Protein interactions for RNA: ENST00000558204.5

LRRC49-208, Transcript of leucine rich repeat containing 49, humanhuman

TSL 4

Gene LRRC49, Length 559 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-208ENST00000558204 COL5A1-AS1Q5SY13 56 aa2.74□□□□□ -1.97
LRRC49-208ENST00000558204 SPINT4Q6UDR6 99 aa2.72□□□□□ -1.97
LRRC49-208ENST00000558204 C10orf95Q9H7T3 257 aa2.72□□□□□ -1.97
LRRC49-208ENST00000558204 FAM240AA0A1B0GVK7 77 aa2.7□□□□□ -1.98
LRRC49-208ENST00000558204 AHNAKQ09666 5890 aaKnown RBP2.69□□□□□ -1.98
LRRC49-208ENST00000558204 A0A0A0MQY5 61 aa2.69□□□□□ -1.98
LRRC49-208ENST00000558204 LCE3AQ5TA76 89 aa2.68□□□□□ -1.98
LRRC49-208ENST00000558204 LINC00643Q86TS7 51 aa2.68□□□□□ -1.98
LRRC49-208ENST00000558204 SCGB1A1P11684 91 aa2.67□□□□□ -1.98
LRRC49-208ENST00000558204 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
LRRC49-208ENST00000558204 MUC5BQ9HC84 5762 aaPredicted RBP2.66□□□□□ -1.98
LRRC49-208ENST00000558204 OBSCNQ5VST9 7968 aa2.66□□□□□ -1.98
LRRC49-208ENST00000558204 SYNE1Q8NF91 8797 aaKnown RBP2.65□□□□□ -1.99
LRRC49-208ENST00000558204 MUC5ACP98088 5654 aa2.64□□□□□ -1.99
LRRC49-208ENST00000558204 SPATA8Q6RVD6 105 aa2.62□□□□□ -1.99
LRRC49-208ENST00000558204 TNP1P09430 55 aa2.61□□□□□ -1.99
LRRC49-208ENST00000558204 LCE3CQ5T5A8 94 aa2.61□□□□□ -1.99
LRRC49-208ENST00000558204 KRTAP5-8O75690 187 aa2.59□□□□□ -1.99
LRRC49-208ENST00000558204 KRTAP12-1P59990 96 aa2.59□□□□□ -1.99
LRRC49-208ENST00000558204 SEC61GP60059 68 aa2.59□□□□□ -1.99
LRRC49-208ENST00000558204 SERP1Q9Y6X1 66 aa2.59□□□□□ -1.99
LRRC49-208ENST00000558204 KRTAP12-3P60328 96 aa2.57□□□□□ -2
LRRC49-208ENST00000558204 A0A1B0GU33 70 aa2.54□□□□□ -2
LRRC49-208ENST00000558204 LOC105371267A0A1B0GV96 52 aa2.51□□□□□ -2.01
LRRC49-208ENST00000558204 KRTAP5-2Q701N4 177 aa2.51□□□□□ -2.01
LRRC49-208ENST00000558204 NDUFAF8A1L188 74 aa2.49□□□□□ -2.01
LRRC49-208ENST00000558204 SNURFQ9Y675 71 aa2.49□□□□□ -2.01
LRRC49-208ENST00000558204 SMIM26A0A096LP01 95 aa2.48□□□□□ -2.01
LRRC49-208ENST00000558204 SPANXA2-OT1Q8N9U9 137 aa2.47□□□□□ -2.01
LRRC49-208ENST00000558204 SMIM20Q8N5G0 67 aa2.46□□□□□ -2.02
LRRC49-208ENST00000558204 A8MU10 97 aa2.45□□□□□ -2.02
LRRC49-208ENST00000558204 COA5Q86WW8 74 aa2.45□□□□□ -2.02
LRRC49-208ENST00000558204 SVIPQ8NHG7 77 aa2.45□□□□□ -2.02
LRRC49-208ENST00000558204 PCP4L1A6NKN8 68 aa2.44□□□□□ -2.02
LRRC49-208ENST00000558204 KRTAP6-1Q3LI64 71 aa2.43□□□□□ -2.02
LRRC49-208ENST00000558204 MT1AP04731 61 aa2.42□□□□□ -2.02
LRRC49-208ENST00000558204 J3QR89 54 aa2.4□□□□□ -2.03
LRRC49-208ENST00000558204 SERP2Q8N6R1 65 aa2.4□□□□□ -2.03
LRRC49-208ENST00000558204 KRTAP6-2Q3LI66 62 aa2.39□□□□□ -2.03
LRRC49-208ENST00000558204 A0A1B0GU69 56 aa2.36□□□□□ -2.03
LRRC49-208ENST00000558204 KRTAP25-1Q3LHN0 102 aa2.36□□□□□ -2.03
LRRC49-208ENST00000558204 LCE3EQ5T5B0 92 aa2.36□□□□□ -2.03
LRRC49-208ENST00000558204 A0A1B0GV90 55 aa2.26□□□□□ -2.05
LRRC49-208ENST00000558204 PRAC1Q96KF2 57 aa2.22□□□□□ -2.05
LRRC49-208ENST00000558204 PRR15LQ9BU68 103 aa2.22□□□□□ -2.05
LRRC49-208ENST00000558204 H7BZZ5 65 aa2.18□□□□□ -2.06
LRRC49-208ENST00000558204 LCE1CQ5T751 118 aa2.18□□□□□ -2.06
LRRC49-208ENST00000558204 LCE1BQ5T7P3 118 aa2.18□□□□□ -2.06
LRRC49-208ENST00000558204 K7ERU9 68 aa2.12□□□□□ -2.07
LRRC49-208ENST00000558204 UQCR11O14957 56 aa2.1□□□□□ -2.07
LRRC49-208ENST00000558204 K7ERS5 55 aa2.09□□□□□ -2.07
LRRC49-208ENST00000558204 COX7CP15954 63 aa2.09□□□□□ -2.07
LRRC49-208ENST00000558204 LINC01558Q9Y6Z2 57 aa2.04□□□□□ -2.08
LRRC49-208ENST00000558204 RPS28P62857 69 aaKnown RBP2.03□□□□□ -2.08
LRRC49-208ENST00000558204 MIR22HGQ0VDD5 57 aa2.02□□□□□ -2.09
LRRC49-208ENST00000558204 ATP5EP56381 51 aaPredicted RBP1.91□□□□□ -2.1
LRRC49-208ENST00000558204 CDC42SE1Q9NRR8 79 aa1.91□□□□□ -2.1
LRRC49-208ENST00000558204 PHGR1C9JFL3 82 aa1.87□□□□□ -2.11
LRRC49-208ENST00000558204 ANAPC13Q9BS18 74 aa1.85□□□□□ -2.11
LRRC49-208ENST00000558204 ROMO1P60602 79 aa1.84□□□□□ -2.11
LRRC49-208ENST00000558204 Q1T7F1 81 aa1.84□□□□□ -2.11
LRRC49-208ENST00000558204 LCE3DQ9BYE3 92 aa1.84□□□□□ -2.11
LRRC49-208ENST00000558204 CCDC179H3BU77 68 aa1.81□□□□□ -2.12
LRRC49-208ENST00000558204 PSPHP1O15172 72 aa1.8□□□□□ -2.12
LRRC49-208ENST00000558204 MUC19Q7Z5P9 8384 aa1.79□□□□□ -2.12
LRRC49-208ENST00000558204 A6NED7 52 aa1.73□□□□□ -2.13
LRRC49-208ENST00000558204 TMEM258P61165 79 aa1.72□□□□□ -2.13
LRRC49-208ENST00000558204 V9GYY9 64 aa1.72□□□□□ -2.13
LRRC49-208ENST00000558204 KRTAP21-2Q3LI59 83 aa1.58□□□□□ -2.16
LRRC49-208ENST00000558204 KRTAP21-1Q3LI58 79 aa1.41□□□□□ -2.18
LRRC49-208ENST00000558204 BRK1Q8WUW1 75 aa1.14□□□□□ -2.23
LRRC49-208ENST00000558204 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
LRRC49-208ENST00000558204 PMAIP1Q13794 54 aa0.98□□□□□ -2.25
LRRC49-208ENST00000558204 LUZP6Q538Z0 58 aa0.98□□□□□ -2.25
LRRC49-208ENST00000558204 PRM1P04553 51 aa0.93□□□□□ -2.26
LRRC49-208ENST00000558204 KTN1-AS1Q86SY8 53 aa0.61□□□□□ -2.31
LRRC49-208ENST00000558204 PRO0628Q9UI54 55 aa0.54□□□□□ -2.32
LRRC49-208ENST00000558204 INE1O15225 51 aa0.18□□□□□ -2.38
Retrieved 78 of 20,778 RNA–protein pairs in 59.5 ms