RNA–Protein interactions for RNA: ENST00000558190.5

ATXN3-248, Transcript of ataxin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN3, Length 26,812 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-248ENST00000558190 KRTAP19-8Q3LI54 63 aa1.22□□□□□ -2.21
ATXN3-248ENST00000558190 FCGBPQ9Y6R7 5405 aaPredicted RBP1.2□□□□□ -2.22
ATXN3-248ENST00000558190 MUC5BQ9HC84 5762 aaPredicted RBP1.19□□□□□ -2.22
ATXN3-248ENST00000558190 LOC100996750A0A140TA64 210 aa1.19□□□□□ -2.22
ATXN3-248ENST00000558190 PRM1P04553 51 aa1.19□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP9-3Q9BYQ3 159 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP2-3P0C7H8 128 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP2-4Q9BYR9 128 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP2-1Q9BYU5 128 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 MT1BP07438 61 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP9-8Q9BYQ0 159 aa1.18□□□□□ -2.22
ATXN3-248ENST00000558190 MT1LQ93083 61 aa1.17□□□□□ -2.22
ATXN3-248ENST00000558190 KRTAP4-9Q9BYQ8 210 aa1.16□□□□□ -2.22
ATXN3-248ENST00000558190 SPRR2FQ96RM1 72 aa1.16□□□□□ -2.22
ATXN3-248ENST00000558190 LCE2CQ5TA81 110 aa1.15□□□□□ -2.23
ATXN3-248ENST00000558190 KRTAP4-3Q9BYR4 195 aa1.15□□□□□ -2.23
ATXN3-248ENST00000558190 MT1EP04732 61 aa1.14□□□□□ -2.23
ATXN3-248ENST00000558190 SSPOA2VEC9 5147 aa1.11□□□□□ -2.23
ATXN3-248ENST00000558190 SYNE1Q8NF91 8797 aaKnown RBP1.1□□□□□ -2.23
ATXN3-248ENST00000558190 KRTAP9-6A8MVA2 160 aa1.08□□□□□ -2.24
ATXN3-248ENST00000558190 OBSCNQ5VST9 7968 aa1.08□□□□□ -2.24
ATXN3-248ENST00000558190 LCE1BQ5T7P3 118 aa1.08□□□□□ -2.24
ATXN3-248ENST00000558190 MT1AP04731 61 aa1.07□□□□□ -2.24
ATXN3-248ENST00000558190 LCE2BO14633 110 aa1.06□□□□□ -2.24
ATXN3-248ENST00000558190 SPRR2EP22531 72 aa1.06□□□□□ -2.24
ATXN3-248ENST00000558190 SPRR2BP35325 72 aa1.06□□□□□ -2.24
ATXN3-248ENST00000558190 SPRR2AP35326 72 aa1.06□□□□□ -2.24
ATXN3-248ENST00000558190 KRTAP19-2Q3LHN2 52 aa1.06□□□□□ -2.24
ATXN3-248ENST00000558190 KRTAP2-2Q9BYT5 123 aa1.05□□□□□ -2.24
ATXN3-248ENST00000558190 LCE1AQ5T7P2 110 aa1.05□□□□□ -2.24
ATXN3-248ENST00000558190 MT1MQ8N339 61 aa1.05□□□□□ -2.24
ATXN3-248ENST00000558190 MUC5ACP98088 5654 aa1.05□□□□□ -2.24
ATXN3-248ENST00000558190 KRTAP19-3Q7Z4W3 81 aa1.05□□□□□ -2.24
ATXN3-248ENST00000558190 KRTAP9-7A8MTY7 169 aa1.04□□□□□ -2.24
ATXN3-248ENST00000558190 KRTAP6-2Q3LI66 62 aa1.04□□□□□ -2.24
ATXN3-248ENST00000558190 SPRR2DP22532 72 aa1.02□□□□□ -2.25
ATXN3-248ENST00000558190 LCE1DQ5T752 114 aa1.01□□□□□ -2.25
ATXN3-248ENST00000558190 LCE2DQ5TA82 110 aaPredicted RBP1.01□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP19-7Q3SYF9 63 aa1.01□□□□□ -2.25
ATXN3-248ENST00000558190 LCE1EQ5T753 118 aa0.99□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP9-4Q9BYQ2 154 aa0.99□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP9-6A0A140TA67 174 aa0.98□□□□□ -2.25
ATXN3-248ENST00000558190 MT4P47944 62 aa0.97□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP6-3Q3LI67 103 aa0.97□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP6-1Q3LI64 71 aa0.97□□□□□ -2.25
ATXN3-248ENST00000558190 KRTAP19-6Q3LI70 58 aa0.95□□□□□ -2.26
ATXN3-248ENST00000558190 LCE2AQ5TA79 106 aaPredicted RBP0.94□□□□□ -2.26
ATXN3-248ENST00000558190 LCE5AQ5TCM9 118 aa0.93□□□□□ -2.26
ATXN3-248ENST00000558190 KRTAP9-2Q9BYQ4 174 aa0.92□□□□□ -2.26
ATXN3-248ENST00000558190 LCE4AQ5TA78 99 aa0.9□□□□□ -2.27
ATXN3-248ENST00000558190 KRTAP4-11Q9BYQ6 195 aa0.9□□□□□ -2.27
ATXN3-248ENST00000558190 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
ATXN3-248ENST00000558190 LCE1FQ5T754 118 aa0.9□□□□□ -2.27
ATXN3-248ENST00000558190 KRTAP9-9Q9BYP9 154 aa0.89□□□□□ -2.27
ATXN3-248ENST00000558190 KRTAP5-5Q701N2 237 aaPredicted RBP0.89□□□□□ -2.27
ATXN3-248ENST00000558190 KRTAP5-9P26371 169 aa0.85□□□□□ -2.27
ATXN3-248ENST00000558190 KRTAP4-4Q9BYR3 166 aa0.83□□□□□ -2.28
ATXN3-248ENST00000558190 KRTAP20-1Q3LI63 56 aa0.83□□□□□ -2.28
ATXN3-248ENST00000558190 MUC19Q7Z5P9 8384 aa0.81□□□□□ -2.28
ATXN3-248ENST00000558190 KRTAP4-12Q9BQ66 201 aa0.8□□□□□ -2.28
ATXN3-248ENST00000558190 KRTAP4-2Q9BYR5 136 aa0.8□□□□□ -2.28
ATXN3-248ENST00000558190 KRTAP20-2Q3LI61 65 aa0.8□□□□□ -2.28
ATXN3-248ENST00000558190 KRTAP4-6Q9BYQ5 205 aa0.76□□□□□ -2.29
ATXN3-248ENST00000558190 KRTAP9-1A8MXZ3 250 aaPredicted RBP0.73□□□□□ -2.29
ATXN3-248ENST00000558190 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
ATXN3-248ENST00000558190 KRTAP5-2Q701N4 177 aa0.67□□□□□ -2.3
ATXN3-248ENST00000558190 KRTAP5-4Q6L8H1 288 aa0.66□□□□□ -2.3
ATXN3-248ENST00000558190 KRTAP5-8O75690 187 aa0.63□□□□□ -2.31
ATXN3-248ENST00000558190 KRTAP5-3Q6L8H2 238 aa0.63□□□□□ -2.31
ATXN3-248ENST00000558190 KRTAP5-6Q6L8G9 129 aaPredicted RBP0.61□□□□□ -2.31
ATXN3-248ENST00000558190 KRTAP5-7Q6L8G8 165 aa0.57□□□□□ -2.32
ATXN3-248ENST00000558190 KRTAP21-1Q3LI58 79 aa0.57□□□□□ -2.32
ATXN3-248ENST00000558190 KRTAP5-11Q6L8G4 156 aa0.57□□□□□ -2.32
ATXN3-248ENST00000558190 KRTAP5-1Q6L8H4 278 aa0.57□□□□□ -2.32
ATXN3-248ENST00000558190 KRTAP5-10Q6L8G5 202 aa0.55□□□□□ -2.32
ATXN3-248ENST00000558190 KRTAP21-2Q3LI59 83 aa0.48□□□□□ -2.33
ATXN3-248ENST00000558190 PHGR1C9JFL3 82 aa0.45□□□□□ -2.34
Retrieved 77 of 20,778 RNA–protein pairs in 6.6 ms